AGICode | AT1G35210 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G35210 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
1 | 0.3 | -0.3 | |||
2 | AT2G46400 | WRKY DNA-binding protein 46 | WRKY DNA-BINDING PROTEIN 46, WRKY DNA-binding protein 46 |
0.77 | 0.33 | -0.3 | ||
3 | AT5G26920 | Cam-binding protein 60-like G | Cam-binding protein 60-like G | 0.74 | 0.31 | -0.33 | ||
4 | AT1G68720 | tRNA arginine adenosine deaminase | ARABIDOPSIS THALIANA TRNA ADENOSINE DEAMINASE A, tRNA arginine adenosine deaminase |
-0.71 | 0.31 | -0.3 | ||
5 | AT5G47230 | ethylene responsive element binding factor 5 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, ethylene responsive element binding factor 5 |
0.7 | 0.31 | -0.29 | ||
6 | AT1G23710 | Protein of unknown function (DUF1645) | 0.69 | 0.3 | -0.31 | |||
7 | AT4G27657 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54145.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.69 | 0.31 | -0.3 | |||
8 | AT1G51700 | DOF zinc finger protein 1 | DOF zinc finger protein 1, DOF zinc finger protein 1 |
0.69 | 0.31 | -0.32 | ||
9 | AT1G61340 | F-box family protein | 0.68 | 0.34 | -0.33 | |||
10 | AT4G36220 | ferulic acid 5-hydroxylase 1 | CYP84A1, ferulic acid 5-hydroxylase 1 |
0.68 | 0.32 | -0.32 | ||
11 | AT3G46600 | GRAS family transcription factor | 0.68 | 0.31 | -0.3 | |||
12 | AT1G18740 | Protein of unknown function (DUF793) | 0.67 | 0.31 | -0.31 | |||
13 | AT1G73540 | nudix hydrolase homolog 21 | nudix hydrolase homolog 21, nudix hydrolase homolog 21 |
0.66 | 0.32 | -0.29 | ||
14 | AT4G24570 | dicarboxylate carrier 2 | dicarboxylate carrier 2 | 0.66 | 0.32 | -0.33 | ||
15 | AT4G28400 | Protein phosphatase 2C family protein | 0.66 | 0.31 | -0.33 | |||
16 | AT4G27280 | Calcium-binding EF-hand family protein | 0.66 | 0.3 | -0.31 | |||
17 | AT1G14390 | Leucine-rich repeat protein kinase family protein | -0.65 | 0.33 | -0.34 | |||
18 | AT1G71010 | FORMS APLOID AND BINUCLEATE CELLS 1C | FORMS APLOID AND BINUCLEATE CELLS 1C |
-0.65 | 0.31 | -0.29 | ||
19 | AT3G45640 | mitogen-activated protein kinase 3 | ATMAPK3, mitogen-activated protein kinase 3, mitogen-activated protein kinase 3 |
0.64 | 0.33 | -0.3 | ||
20 | AT3G42350 | transposable element gene | -0.64 | 0.33 | -0.32 | |||
21 | AT5G49050 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.64 | 0.3 | -0.31 | |||
22 | AT1G49780 | plant U-box 26 | plant U-box 26 | 0.64 | 0.31 | -0.35 | ||
23 | AT5G65950 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.63 | 0.32 | -0.33 | |||
24 | AT1G15010 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits to 71 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.32 | -0.28 | |||
25 | AT3G25600 | Calcium-binding EF-hand family protein | 0.63 | 0.31 | -0.32 | |||
26 | AT3G13772 | transmembrane nine 7 | AtTMN7, transmembrane nine 7 | -0.63 | 0.32 | -0.33 | ||
27 | AT1G12610 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 1 | 0.63 | 0.32 | -0.31 | ||
28 | AT1G27100 | Actin cross-linking protein | 0.63 | 0.33 | -0.31 | |||
29 | AT3G15530 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.63 | 0.33 | -0.33 | |||
30 | AT1G19290 | Pentatricopeptide repeat (PPR) superfamily protein | -0.63 | 0.3 | -0.32 | |||
31 | AT1G48110 | evolutionarily conserved C-terminal region 7 | evolutionarily conserved C-terminal region 7 |
-0.62 | 0.32 | -0.33 | ||
32 | AT2G24600 | Ankyrin repeat family protein | 0.62 | 0.32 | -0.31 | |||
33 | AT1G68940 | Armadillo/beta-catenin-like repeat family protein | -0.62 | 0.31 | -0.32 | |||
34 | AT5G12100 | pentatricopeptide (PPR) repeat-containing protein | -0.62 | 0.32 | -0.31 | |||
35 | AT1G50590 | RmlC-like cupins superfamily protein | 0.62 | 0.31 | -0.31 | |||
36 | AT5G57220 | cytochrome P450, family 81, subfamily F, polypeptide 2 | cytochrome P450, family 81, subfamily F, polypeptide 2 |
0.62 | 0.31 | -0.31 | ||
37 | AT5G37490 | ARM repeat superfamily protein | 0.62 | 0.29 | -0.31 | |||
38 | AT3G13640 | RNAse l inhibitor protein 1 | ATP-binding cassette E1, RNAse l inhibitor protein 1, RNAse l inhibitor protein 1 |
0.61 | 0.31 | -0.3 | ||
39 | AT3G48650 | pseudogene, At14a-related protein, similar to At14a (GI:11994571 and GI:11994573) (Arabidopsis thaliana) |
0.61 | 0.31 | -0.31 | |||
40 | AT1G26620 | Plant protein of unknown function (DUF863) | -0.61 | 0.31 | -0.3 | |||
41 | AT5G51670 | Protein of unknown function (DUF668) | -0.6 | 0.3 | -0.31 | |||
42 | AT3G30530 | basic leucine-zipper 42 | basic leucine-zipper 42, basic leucine-zipper 42 |
0.6 | 0.31 | -0.31 | ||
43 | AT2G28940 | Protein kinase superfamily protein | 0.6 | 0.31 | -0.33 | |||
44 | AT2G21510 | DNAJ heat shock N-terminal domain-containing protein | 0.6 | 0.32 | -0.31 | |||
45 | AT5G48750 | Cytochrome b561/ferric reductase transmembrane with DOMON related domain |
0.6 | 0.31 | -0.31 | |||
46 | AT3G60860 | SEC7-like guanine nucleotide exchange family protein | -0.6 | 0.32 | -0.35 | |||
47 | AT3G61920 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.32 | -0.32 | |||
48 | AT4G17610 | tRNA/rRNA methyltransferase (SpoU) family protein | -0.59 | 0.31 | -0.3 | |||
49 | AT1G09950 | RESPONSE TO ABA AND SALT 1 | RESPONSE TO ABA AND SALT 1 | 0.59 | 0.3 | -0.31 | ||
50 | AT1G23890 | NHL domain-containing protein | -0.59 | 0.32 | -0.32 | |||
51 | AT4G33800 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.3 | -0.33 | |||
52 | AT4G08210 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.59 | 0.31 | -0.31 | |||
53 | AT1G62440 | leucine-rich repeat/extensin 2 | leucine-rich repeat/extensin 2 | -0.59 | 0.33 | -0.3 | ||
54 | AT5G03280 | NRAMP metal ion transporter family protein | ATEIN2, CYTOKININ RESISTANT 1, ETHYLENE INSENSITIVE 2, ENHANCED RESPONSE TO ABA3, ORESARA 2, ORESARA 3, PIR2 |
-0.59 | 0.35 | -0.31 | ||
55 | AT5G61600 | ethylene response factor 104 | ethylene response factor 104 | 0.59 | 0.32 | -0.32 | ||
56 | AT1G69840 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
0.59 | 0.31 | -0.32 | |||
57 | AT3G21830 | SKP1-like 8 | SKP1-like 8, SKP1-like 8 | 0.59 | 0.33 | -0.32 | ||
58 | AT3G24650 | AP2/B3-like transcriptional factor family protein | ABA INSENSITIVE 3, ABSCISIC ACID INSENSITIVE 3, SUGAR INSENSITIVE 10 |
-0.59 | 0.33 | -0.3 | ||
59 | AT5G57740 | XB3 ortholog 2 in Arabidopsis thaliana | XB3 ortholog 2 in Arabidopsis thaliana |
-0.59 | 0.31 | -0.32 | ||
60 | AT3G29590 | HXXXD-type acyl-transferase family protein | AT5MAT | 0.59 | 0.29 | -0.32 | ||
61 | AT2G26190 | calmodulin-binding family protein | 0.58 | 0.32 | -0.32 | |||
62 | AT5G35160 | Endomembrane protein 70 protein family | -0.58 | 0.32 | -0.31 | |||
63 | AT5G08550 | GC-rich sequence DNA-binding factor-like protein | increased level of polyploidy1-1D | -0.58 | 0.31 | -0.3 | ||
64 | AT1G76290 | AMP-dependent synthetase and ligase family protein | -0.58 | 0.32 | -0.32 | |||
65 | AT2G36910 | ATP binding cassette subfamily B1 | ATP-binding cassette B1, ARABIDOPSIS THALIANA P GLYCOPROTEIN1, P-GLYCOPROTEIN 1 |
-0.58 | 0.31 | -0.32 | ||
66 | AT2G04830 | Protein of unknown function (DUF295) | -0.57 | 0.33 | -0.31 | |||
67 | AT4G25470 | C-repeat/DRE binding factor 2 | ATCBF2, C-repeat/DRE binding factor 2, DRE/CRT-BINDING PROTEIN 1C, FREEZING TOLERANCE QTL 4 |
0.57 | 0.32 | -0.3 | ||
68 | AT4G16280 | RNA binding;abscisic acid binding | FCA | -0.57 | 0.3 | -0.3 | ||
69 | AT4G25160 | U-box domain-containing protein kinase family protein | -0.57 | 0.29 | -0.3 | |||
70 | AT4G39610 | Protein of unknown function, DUF617 | 0.57 | 0.32 | -0.34 | |||
71 | AT2G30960 | unknown protein; Has 4906 Blast hits to 2903 proteins in 334 species: Archae - 5; Bacteria - 381; Metazoa - 1639; Fungi - 509; Plants - 244; Viruses - 5; Other Eukaryotes - 2123 (source: NCBI BLink). |
0.57 | 0.32 | -0.31 | |||
72 | AT1G02940 | glutathione S-transferase (class phi) 5 | GLUTATHIONE S-TRANSFERASE (CLASS PHI) 5, glutathione S-transferase (class phi) 5 |
0.57 | 0.33 | -0.32 | ||
73 | AT4G18870 | E2F/DP family winged-helix DNA-binding domain | -0.57 | 0.3 | -0.32 | |||
74 | AT4G13020 | Protein kinase superfamily protein | MHK | -0.57 | 0.32 | -0.31 | ||
75 | AT1G17070 | GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain |
-0.56 | 0.31 | -0.31 | |||
76 | AT2G48160 | Tudor/PWWP/MBT domain-containing protein | -0.56 | 0.32 | -0.31 | |||
77 | AT5G22960 | alpha/beta-Hydrolases superfamily protein | -0.56 | 0.33 | -0.32 | |||
78 | AT1G66110 | Family of unknown function (DUF577) | -0.56 | 0.32 | -0.33 | |||
79 | AT1G68750 | phosphoenolpyruvate carboxylase 4 | phosphoenolpyruvate carboxylase 4, phosphoenolpyruvate carboxylase 4 |
-0.55 | 0.31 | -0.35 | ||
80 | AT5G03555 | permease, cytosine/purines, uracil, thiamine, allantoin family protein |
-0.55 | 0.3 | -0.3 | |||
81 | AT3G44210 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits to 15 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.3 | -0.32 | |||
82 | AT2G24400 | SAUR-like auxin-responsive protein family | -0.55 | 0.33 | -0.32 | |||
83 | AT5G12370 | exocyst complex component sec10 | exocyst complex component sec10 | -0.55 | 0.32 | -0.32 | ||
84 | AT5G19840 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.55 | 0.31 | -0.33 | |||
85 | AT1G32240 | Homeodomain-like superfamily protein | KANADI 2 | -0.55 | 0.31 | -0.33 | ||
86 | AT3G03570 | Protein of unknown function (DUF3550/UPF0682) | -0.55 | 0.34 | -0.3 | |||
87 | AT2G04380 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.33 | |||
88 | AT1G68790 | little nuclei3 | CROWDED NUCLEI 3, LITTLE NUCLEI3 | -0.54 | 0.32 | -0.34 | ||
89 | AT5G11560 | catalytics | -0.54 | 0.31 | -0.3 | |||
90 | AT1G26110 | decapping 5 | decapping 5 | -0.54 | 0.31 | -0.31 | ||
91 | AT2G28560 | DNA repair (Rad51) family protein | ATRAD51B, RAD51B | -0.54 | 0.29 | -0.32 | ||
92 | AT2G07290 | unknown protein; Has 8 Blast hits to 8 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.32 | |||
93 | AT1G55600 | WRKY DNA-binding protein 10 | ATWRKY10, MINISEED 3, WRKY DNA-binding protein 10 |
-0.53 | 0.31 | -0.31 | ||
94 | AT5G19400 | Telomerase activating protein Est1 | SMG7 | -0.53 | 0.31 | -0.3 | ||
95 | AT2G41451 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.53 | 0.32 | -0.32 | |||
96 | AT1G69120 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 7, APETALA1 | -0.53 | 0.32 | -0.29 | ||
97 | AT1G17615 | Disease resistance protein (TIR-NBS class) | -0.53 | 0.31 | -0.3 | |||
98 | AT3G32080 | transposable element gene | -0.53 | 0.3 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
99 | C0172 | MST_2214.3 | - | - | - | 0.66 | 0.43 | -0.48 | ||
100 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
-0.52 | 0.33 | -0.33 |