AT1G30290 : -
Query Information
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AGICode AT1G30290
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.31 -0.31
2 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.8 0.33 -0.3
3 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.8 0.31 -0.31
4 AT5G66130 RADIATION SENSITIVE 17 RADIATION SENSITIVE 17, RADIATION
SENSITIVE 17		 0.79 0.33 -0.33
5 AT5G47420 Tryptophan RNA-binding attenuator protein-like -0.78 0.31 -0.28
6 AT3G15760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.78 0.31 -0.3
7 AT1G53590 Calcium-dependent lipid-binding (CaLB domain) family
protein		 NTMC2T6.1, NTMC2TYPE6.1 0.76 0.31 -0.32
8 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 0.76 0.32 -0.33
9 AT1G26370 RNA helicase family protein 0.75 0.32 -0.3
10 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.75 0.33 -0.32
11 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.33 -0.32
12 AT1G79090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Topoisomerase II-associated protein PAT1
(InterPro:IPR019167); BEST Arabidopsis thaliana protein
match is: Topoisomerase II-associated protein PAT1
(TAIR:AT3G22270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.32 -0.31
13 AT1G28060 Pre-mRNA-splicing factor 3 0.73 0.33 -0.32
14 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 0.73 0.31 -0.29
15 AT3G24080 KRR1 family protein 0.73 0.34 -0.31
16 AT3G60910 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.31 -0.33
17 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 0.72 0.31 -0.31
18 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 0.72 0.33 -0.31
19 AT4G12750 Homeodomain-like transcriptional regulator 0.72 0.31 -0.31
20 AT3G62310 RNA helicase family protein 0.72 0.34 -0.32
21 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.72 0.3 -0.34
22 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 0.72 0.32 -0.29
23 AT4G37320 cytochrome P450, family 81, subfamily D, polypeptide 5 cytochrome P450, family 81,
subfamily D, polypeptide 5		 0.72 0.32 -0.31
24 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein 0.72 0.32 -0.31
25 AT3G59910 Ankyrin repeat family protein 0.71 0.32 -0.33
26 AT3G62240 RING/U-box superfamily protein 0.71 0.31 -0.31
27 AT5G06810 Mitochondrial transcription termination factor family
protein		 0.71 0.33 -0.3
28 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.71 0.33 -0.33
29 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 -0.7 0.31 -0.31
30 AT5G63480 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.7 0.3 -0.33
31 AT1G60890 Phosphatidylinositol-4-phosphate 5-kinase family protein 0.7 0.33 -0.29
32 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.3 -0.32
33 AT1G79990 structural molecules 0.7 0.29 -0.31
34 AT4G13950 ralf-like 31 ralf-like 31 -0.69 0.29 -0.3
35 AT2G18620 Terpenoid synthases superfamily protein -0.69 0.32 -0.31
36 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 0.69 0.32 -0.31
37 AT1G77230 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.32 -0.31
38 AT1G63850 BTB/POZ domain-containing protein 0.68 0.33 -0.32
39 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 0.68 0.32 -0.31
40 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein -0.68 0.29 -0.31
41 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 0.68 0.31 -0.31
42 AT1G63670 Protein of unknown function (DUF3741) 0.68 0.31 -0.3
43 AT2G45460 SMAD/FHA domain-containing protein 0.68 0.34 -0.32
44 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.32
45 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.68 0.32 -0.33
46 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.3 -0.3
47 AT3G13225 WW domain-containing protein 0.68 0.29 -0.31
48 AT3G58050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast
hits to 8116 proteins in 546 species: Archae - 41; Bacteria
- 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses
- 46; Other Eukaryotes - 4915 (source: NCBI BLink).		 0.68 0.34 -0.31
49 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 -0.67 0.32 -0.31
50 AT1G28327 unknown protein; Has 52 Blast hits to 52 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.31
51 AT2G36470 Plant protein of unknown function (DUF868) 0.67 0.31 -0.32
52 AT1G68270 AMP-dependent synthetase and ligase family protein 0.67 0.32 -0.33
53 AT3G02990 heat shock transcription factor A1E heat shock transcription factor
A1E, heat shock transcription
factor A1E		 0.67 0.32 -0.3
54 AT3G20720 unknown protein; Has 184 Blast hits to 181 proteins in 66
species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi -
0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.67 0.33 -0.33
55 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 -0.67 0.32 -0.34
56 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.67 0.32 -0.3
57 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 -0.66 0.32 -0.31
58 AT1G48120 hydrolases;protein serine/threonine phosphatases 0.66 0.29 -0.31
59 AT2G14810 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.31 -0.31
60 AT5G19120 Eukaryotic aspartyl protease family protein -0.66 0.35 -0.33
61 AT1G17110 ubiquitin-specific protease 15 ubiquitin-specific protease 15 0.66 0.34 -0.33
62 AT1G35330 RING/U-box superfamily protein -0.66 0.32 -0.31
63 AT4G37130 hydroxyproline-rich glycoprotein family protein 0.66 0.31 -0.32
64 AT1G55820 Kinase-related protein of unknown function (DUF1296) 0.66 0.32 -0.3
65 AT5G09880 Splicing factor, CC1-like 0.66 0.3 -0.32
66 AT4G24730 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.65 0.3 -0.31
67 AT5G06460 ubiquitin activating enzyme 2 ARABIDOPSIS THALIANA UBIQUITIN
ACTIVATING ENZYME 2, ubiquitin
activating enzyme 2		 0.65 0.32 -0.31
68 AT5G41080 PLC-like phosphodiesterases superfamily protein AtGDPD2, glycerophosphodiester
phosphodiesterase 2		 -0.65 0.33 -0.34
69 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 0.65 0.33 -0.32
70 AT1G54850 HSP20-like chaperones superfamily protein -0.65 0.31 -0.32
71 AT3G06480 DEAD box RNA helicase family protein 0.65 0.3 -0.34
72 AT4G19045 Mob1/phocein family protein -0.65 0.32 -0.33
73 AT2G38770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 EMBRYO DEFECTIVE 2765 0.65 0.32 -0.31
74 AT5G41260 Protein kinase protein with tetratricopeptide repeat domain 0.65 0.32 -0.32
75 AT5G01290 mRNA capping enzyme family protein 0.65 0.32 -0.3
76 AT1G25320 Leucine-rich repeat protein kinase family protein 0.65 0.33 -0.33
77 AT1G17630 Pentatricopeptide repeat (PPR-like) superfamily protein 0.65 0.32 -0.33
78 AT3G50210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.32 -0.29
79 AT4G02710 Kinase interacting (KIP1-like) family protein 0.65 0.32 -0.34
80 AT4G14600 Target SNARE coiled-coil domain protein -0.64 0.34 -0.34
81 AT1G60560 SWIM zinc finger family protein 0.64 0.31 -0.31
82 AT1G06630 F-box/RNI-like superfamily protein -0.64 0.31 -0.3
83 AT3G25890 Integrase-type DNA-binding superfamily protein cytokinin response factor 11 0.64 0.32 -0.31
84 AT2G25620 DNA-binding protein phosphatase 1 DNA-binding protein phosphatase 1,
DNA-binding protein phosphatase 1		 0.64 0.32 -0.31
85 AT5G11730 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.64 0.3 -0.32
86 AT5G16380 Protein of unknown function, DUF538 0.64 0.32 -0.31
87 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 -0.64 0.31 -0.34
88 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.64 0.33 -0.32
89 AT4G24200 Transcription elongation factor (TFIIS) family protein 0.64 0.31 -0.32
90 AT1G08410 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.34 -0.29
91 AT5G12310 RING/U-box superfamily protein -0.64 0.3 -0.33
92 AT1G33250 Protein of unknown function (DUF604) 0.64 0.3 -0.33
93 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.33 -0.3
94 AT3G16540 DegP protease 11 DegP protease 11 -0.63 0.33 -0.32
95 AT5G19430 RING/U-box superfamily protein -0.62 0.31 -0.32
96 AT1G30200 F-box family protein -0.62 0.31 -0.32
97 AT3G13845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.31 -0.33
98 AT1G49480 related to vernalization1 1 related to vernalization1 1 -0.62 0.3 -0.32
99 AT1G43580 Sphingomyelin synthetase family protein -0.62 0.33 -0.3
100 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.34
101 AT4G23310 cysteine-rich RLK (RECEPTOR-like protein kinase) 23 cysteine-rich RLK (RECEPTOR-like
protein kinase) 23		 -0.61 0.3 -0.33
102 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 -0.61 0.33 -0.31
103 AT1G22460 O-fucosyltransferase family protein -0.61 0.32 -0.3
104 AT1G02160 Cox19 family protein (CHCH motif) -0.61 0.3 -0.31
105 AT1G48160 signal recognition particle 19 kDa protein, putative /
SRP19, putative		 -0.61 0.3 -0.3
106 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E -0.61 0.32 -0.33
107 ATMG00680 hypothetical protein ORF122C -0.61 0.31 -0.3
108 AT5G39370 Curculin-like (mannose-binding) lectin family protein -0.6 0.32 -0.31
109 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.6 0.31 -0.33
110 AT3G09470 Major facilitator superfamily protein -0.6 0.31 -0.33
111 AT5G61590 Integrase-type DNA-binding superfamily protein -0.6 0.31 -0.32
112 AT5G55000 potassium channel tetramerisation domain-containing protein
/ pentapeptide repeat-containing protein		 FIP2 -0.6 0.35 -0.31
113 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.31 -0.31
114 AT1G75130 cytochrome P450, family 721, subfamily A, polypeptide 1 cytochrome P450, family 721,
subfamily A, polypeptide 1		 -0.6 0.33 -0.31
115 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.6 0.34 -0.32
116 AT5G03440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.31 -0.31
117 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.3 -0.31
118 AT1G32840 transposable element gene -0.59 0.32 -0.31
119 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.31 -0.31
120 AT4G34215 Domain of unknown function (DUF303) -0.58 0.32 -0.33
121 AT2G02820 myb domain protein 88 myb domain protein 88, myb domain
protein 88		 -0.58 0.31 -0.31
122 AT4G15250 B-box type zinc finger protein with CCT domain -0.58 0.31 -0.31
123 AT5G44880 transposable element gene -0.58 0.32 -0.32
124 AT1G32210 Defender against death (DAD family) protein DEFENDER AGAINST APOPTOTIC DEATH 1 -0.57 0.33 -0.32
125 AT5G40020 Pathogenesis-related thaumatin superfamily protein -0.57 0.3 -0.32
126 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.57 0.3 -0.31
127 AT5G22280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.32 -0.31
128 AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein -0.57 0.3 -0.33
129 AT1G71130 Integrase-type DNA-binding superfamily protein cytokinin response factor 8 -0.57 0.32 -0.33
130 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.57 0.34 -0.34
131 AT3G07930 DNA glycosylase superfamily protein -0.56 0.29 -0.31
132 AT5G26840 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.56 0.31 -0.31
133 AT1G55520 TATA binding protein 2 A. THALIANA TATA BINDING PROTEIN
2, TATA binding protein 2		 -0.56 0.3 -0.3
134 AT2G36920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.31 -0.33
135 AT5G02740 Ribosomal protein S24e family protein -0.56 0.31 -0.32
136 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 -0.56 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
137 C0145 Maltotetraose - Maltotetraose starch degradation II 0.76 0.47 -0.45 C0145
138 C0124 Isonicotinic acid - - - 0.64 0.48 -0.47