AGICode | AT1G32130 |
Description | Transcription elongation factor (TFIIS) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G32130 | Transcription elongation factor (TFIIS) family protein | ARABIDOPSIS THALIANA IWS1 (FROM YEAST INTERACTS WITH SPT6), HIGH NITROGEN INSENSITIVE 9, IWS1 |
1 | 0.31 | -0.3 | ||
2 | AT3G18210 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.84 | 0.3 | -0.31 | |||
3 | AT3G13330 | proteasome activating protein 200 | proteasome activating protein 200 | 0.8 | 0.31 | -0.31 | ||
4 | AT4G14220 | RING-H2 group F1A | RING-H2 group F1A | 0.79 | 0.32 | -0.32 | ||
5 | AT1G80520 | Sterile alpha motif (SAM) domain-containing protein | -0.79 | 0.34 | -0.32 | |||
6 | AT4G26840 | small ubiquitin-like modifier 1 | ARABIDOPSIS THALIANA SMALL UBIQUITIN-LIKE MODIFIER 1, SMALL UBIQUITIN-LIKE MODIFIER 1, SMALL UBIQUITIN-LIKE MODIFIER 1, small ubiquitin-like modifier 1 |
-0.79 | 0.34 | -0.31 | ||
7 | AT2G27130 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.79 | 0.31 | -0.29 | |||
8 | AT1G04680 | Pectin lyase-like superfamily protein | -0.77 | 0.33 | -0.29 | |||
9 | AT1G34260 | FORMS APLOID AND BINUCLEATE CELLS 1A | FORMS APLOID AND BINUCLEATE CELLS 1A |
0.77 | 0.32 | -0.31 | ||
10 | AT5G35980 | yeast YAK1-related gene 1 | yeast YAK1-related gene 1 | 0.76 | 0.32 | -0.31 | ||
11 | AT4G05420 | damaged DNA binding protein 1A | damaged DNA binding protein 1A | 0.76 | 0.32 | -0.32 | ||
12 | AT2G41600 | Mitochondrial glycoprotein family protein | -0.75 | 0.31 | -0.31 | |||
13 | AT1G03820 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to 1122 proteins in 102 species: Archae - 2; Bacteria - 28; Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other Eukaryotes - 1148 (source: NCBI BLink). |
-0.75 | 0.31 | -0.29 | |||
14 | AT4G15790 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). |
-0.75 | 0.31 | -0.34 | |||
15 | AT1G23230 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
0.75 | 0.31 | -0.31 | |||
16 | AT2G38160 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits to 731 proteins in 211 species: Archae - 0; Bacteria - 236; Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32; Other Eukaryotes - 91 (source: NCBI BLink). |
-0.75 | 0.32 | -0.32 | |||
17 | AT3G51620 | PAP/OAS1 substrate-binding domain superfamily | 0.75 | 0.28 | -0.3 | |||
18 | AT5G63670 | SPT4 homolog 2 | SPT4 homolog 2 | -0.75 | 0.33 | -0.31 | ||
19 | AT1G15780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). |
0.75 | 0.32 | -0.33 | |||
20 | AT1G10410 | Protein of unknown function (DUF1336) | 0.75 | 0.31 | -0.28 | |||
21 | AT2G29570 | proliferating cell nuclear antigen 2 | A. THALIANA PROLIFERATING CELL NUCLEAR ANTIGEN 2, proliferating cell nuclear antigen 2 |
-0.75 | 0.33 | -0.29 | ||
22 | AT4G24780 | Pectin lyase-like superfamily protein | -0.74 | 0.3 | -0.35 | |||
23 | AT3G54560 | histone H2A 11 | histone H2A 11 | -0.74 | 0.3 | -0.33 | ||
24 | AT1G48370 | YELLOW STRIPE like 8 | YELLOW STRIPE like 8 | 0.74 | 0.31 | -0.3 | ||
25 | AT5G49930 | zinc knuckle (CCHC-type) family protein | embryo defective 1441 | 0.74 | 0.32 | -0.32 | ||
26 | AT1G74250 | DNAJ heat shock N-terminal domain-containing protein | 0.74 | 0.33 | -0.29 | |||
27 | AT3G10870 | methyl esterase 17 | ARABIDOPSIS THALIANA METHYL ESTERASE 17, methyl esterase 17 |
-0.74 | 0.34 | -0.3 | ||
28 | AT5G43560 | TRAF-like superfamily protein | 0.74 | 0.32 | -0.32 | |||
29 | AT4G28570 | Long-chain fatty alcohol dehydrogenase family protein | 0.74 | 0.32 | -0.31 | |||
30 | AT4G22140 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein |
EARLY BOLTING IN SHORT DAYS | -0.74 | 0.32 | -0.32 | ||
31 | AT2G38465 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.73 | 0.31 | -0.33 | |||
32 | AT5G41760 | Nucleotide-sugar transporter family protein | -0.73 | 0.31 | -0.3 | |||
33 | AT5G16870 | Peptidyl-tRNA hydrolase II (PTH2) family protein | -0.73 | 0.3 | -0.31 | |||
34 | AT1G52320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in 62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi - 2; Plants - 427; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). |
0.73 | 0.34 | -0.32 | |||
35 | AT2G31955 | cofactor of nitrate reductase and xanthine dehydrogenase 2 | cofactor of nitrate reductase and xanthine dehydrogenase 2 |
0.73 | 0.31 | -0.33 | ||
36 | AT5G42870 | phosphatidic acid phosphohydrolase 2 | PHOSPHATIDIC ACID PHOSPHOHYDROLASE 2, phosphatidic acid phosphohydrolase 2 |
0.73 | 0.32 | -0.31 | ||
37 | AT4G17340 | tonoplast intrinsic protein 2;2 | DELTA-TIP2, tonoplast intrinsic protein 2;2 |
-0.73 | 0.31 | -0.31 | ||
38 | AT2G33330 | plasmodesmata-located protein 3 | plasmodesmata-located protein 3 | -0.73 | 0.3 | -0.31 | ||
39 | AT1G16920 | RAB GTPase homolog A1B | RAB GTPase homolog A1B, RAB11, RAB GTPase homolog A1B |
-0.72 | 0.33 | -0.32 | ||
40 | AT3G09850 | D111/G-patch domain-containing protein | 0.72 | 0.3 | -0.32 | |||
41 | AT3G62050 | Putative endonuclease or glycosyl hydrolase | -0.72 | 0.31 | -0.33 | |||
42 | AT3G53190 | Pectin lyase-like superfamily protein | -0.72 | 0.29 | -0.32 | |||
43 | AT5G65720 | nitrogen fixation S (NIFS)-like 1 | ARABIDOPSIS THALIANA NITROGEN FIXATION S (NIFS)-LIKE 1, NITROGEN FIXATION S HOMOLOG 1, nitrogen fixation S (NIFS)-like 1, NITROGEN FIXATION S HOMOLOG 1 |
0.72 | 0.32 | -0.33 | ||
44 | AT3G04240 | Tetratricopeptide repeat (TPR)-like superfamily protein | secret agent | 0.72 | 0.32 | -0.31 | ||
45 | AT2G42110 | unknown protein; Has 27 Blast hits to 27 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.72 | 0.31 | -0.3 | |||
46 | AT2G42380 | Basic-leucine zipper (bZIP) transcription factor family protein |
ATBZIP34, BZIP34 | -0.72 | 0.29 | -0.31 | ||
47 | AT5G10400 | Histone superfamily protein | -0.72 | 0.32 | -0.3 | |||
48 | AT1G80560 | isopropylmalate dehydrogenase 2 | ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 2, isopropylmalate dehydrogenase 2 |
-0.71 | 0.32 | -0.33 | ||
49 | AT5G11110 | sucrose phosphate synthase 2F | sucrose phosphate synthase 2F, KAONASHI 2, SUCROSE PHOSPHATE SYNTHASE 1, sucrose phosphate synthase 2F, sucrose-phosphate synthase A2 |
0.71 | 0.3 | -0.31 | ||
50 | AT2G32720 | cytochrome B5 isoform B | ARABIDOPSIS CYTOCHROME B5 ISOFORM B, B5 #4, cytochrome B5 isoform B |
-0.71 | 0.3 | -0.32 | ||
51 | AT3G42725 | Putative membrane lipoprotein | -0.71 | 0.33 | -0.29 | |||
52 | AT4G14580 | CBL-interacting protein kinase 4 | CBL-interacting protein kinase 4, SNF1-RELATED PROTEIN KINASE 3.3 |
0.71 | 0.32 | -0.32 | ||
53 | AT1G35660 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 309 Blast hits to 256 proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa - 192; Fungi - 12; Plants - 36; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). |
0.71 | 0.32 | -0.29 | |||
54 | AT3G63070 | Tudor/PWWP/MBT domain-containing protein | 0.7 | 0.3 | -0.32 | |||
55 | AT3G62370 | heme binding | -0.7 | 0.31 | -0.33 | |||
56 | AT3G19590 | Transducin/WD40 repeat-like superfamily protein | BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.1 |
-0.7 | 0.3 | -0.33 | ||
57 | AT3G07410 | RAB GTPase homolog A5B | RAB GTPase homolog A5B, RAB GTPase homolog A5B |
-0.7 | 0.33 | -0.31 | ||
58 | AT2G39260 | binding;RNA binding | 0.7 | 0.31 | -0.33 | |||
59 | AT2G23980 | cyclic nucleotide-gated channel 6 | cyclic nucleotide-gated channel 6, CYCLIC NUCLEOTIDE GATED CHANNEL 6, cyclic nucleotide-gated channel 6 |
0.7 | 0.32 | -0.3 | ||
60 | AT5G35560 | DENN (AEX-3) domain-containing protein | 0.7 | 0.32 | -0.32 | |||
61 | AT3G55270 | mitogen-activated protein kinase phosphatase 1 | ARABIDOPSIS MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1, mitogen-activated protein kinase phosphatase 1 |
0.7 | 0.31 | -0.32 | ||
62 | AT1G07880 | Protein kinase superfamily protein | ATMPK13 | -0.7 | 0.3 | -0.31 | ||
63 | AT1G04300 | TRAF-like superfamily protein | 0.69 | 0.32 | -0.34 | |||
64 | AT1G62560 | flavin-monooxygenase glucosinolate S-oxygenase 3 | flavin-monooxygenase glucosinolate S-oxygenase 3 |
-0.69 | 0.33 | -0.32 | ||
65 | AT5G58380 | SOS3-interacting protein 1 | CBL-INTERACTING PROTEIN KINASE 10, PKS2, SOS3-interacting protein 1, SNF1-RELATED PROTEIN KINASE 3.8 |
0.69 | 0.33 | -0.32 | ||
66 | AT4G32160 | Phox (PX) domain-containing protein | 0.69 | 0.31 | -0.32 | |||
67 | AT3G12560 | TRF-like 9 | TELOMERIC DNA-BINDING PROTEIN 2, TRF-like 9 |
-0.69 | 0.29 | -0.3 | ||
68 | AT1G80690 | PPPDE putative thiol peptidase family protein | -0.69 | 0.34 | -0.33 | |||
69 | AT3G11910 | ubiquitin-specific protease 13 | AtUBP13, ubiquitin-specific protease 13 |
0.68 | 0.32 | -0.31 | ||
70 | AT5G20280 | sucrose phosphate synthase 1F | sucrose phosphate synthase 1F, sucrose phosphate synthase 1F, sucrose-phosphate synthase A1 |
0.68 | 0.31 | -0.31 | ||
71 | AT3G02790 | zinc finger (C2H2 type) family protein | -0.68 | 0.32 | -0.29 | |||
72 | AT2G15320 | Leucine-rich repeat (LRR) family protein | 0.68 | 0.32 | -0.31 | |||
73 | AT5G05610 | alfin-like 1 | alfin-like 1 | -0.68 | 0.3 | -0.31 | ||
74 | AT2G26520 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.3 | -0.3 | |||
75 | AT3G48425 | DNAse I-like superfamily protein | -0.68 | 0.3 | -0.31 | |||
76 | AT5G06770 | KH domain-containing protein / zinc finger (CCCH type) family protein |
-0.68 | 0.31 | -0.29 | |||
77 | AT3G22880 | DNA repair (Rad51) family protein | ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15, ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1, DISRUPTION OF MEIOTIC CONTROL 1 |
-0.68 | 0.31 | -0.29 | ||
78 | AT3G10320 | Glycosyltransferase family 61 protein | 0.68 | 0.3 | -0.33 | |||
79 | AT4G09550 | AtGCP3 interacting protein 1 | ARABIDOPSIS ATGCP3 INTERACTING PROTEIN 1, AtGCP3 interacting protein 1 |
-0.67 | 0.32 | -0.3 | ||
80 | AT3G50070 | CYCLIN D3;3 | CYCLIN D3;3 | -0.67 | 0.31 | -0.31 | ||
81 | AT2G40280 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.67 | 0.3 | -0.32 | |||
82 | AT4G31540 | exocyst subunit exo70 family protein G1 | exocyst subunit exo70 family protein G1, exocyst subunit exo70 family protein G1 |
0.67 | 0.32 | -0.31 | ||
83 | ATMG00650 | NADH dehydrogenase subunit 4L | NADH dehydrogenase subunit 4L | 0.67 | 0.31 | -0.32 | ||
84 | AT1G78610 | mechanosensitive channel of small conductance-like 6 | mechanosensitive channel of small conductance-like 6 |
0.67 | 0.31 | -0.29 | ||
85 | AT1G79270 | evolutionarily conserved C-terminal region 8 | evolutionarily conserved C-terminal region 8 |
0.66 | 0.31 | -0.32 | ||
86 | AT5G23110 | Zinc finger, C3HC4 type (RING finger) family protein | 0.66 | 0.33 | -0.33 | |||
87 | AT1G69530 | expansin A1 | AT-EXP1, ATEXP1, expansin A1, ATHEXP ALPHA 1.2, EXPANSIN 1, expansin A1 |
-0.66 | 0.32 | -0.33 | ||
88 | AT1G72480 | Lung seven transmembrane receptor family protein | -0.66 | 0.32 | -0.28 | |||
89 | AT5G05570 | transducin family protein / WD-40 repeat family protein | 0.66 | 0.33 | -0.32 | |||
90 | AT4G12120 | Sec1/munc18-like (SM) proteins superfamily | ATSEC1B, SEC1B | 0.66 | 0.34 | -0.32 | ||
91 | AT4G38600 | HEAT repeat ;HECT-domain (ubiquitin-transferase) | KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 | 0.65 | 0.31 | -0.31 | ||
92 | AT1G23480 | cellulose synthase-like A3 | cellulose synthase-like A3, ATCSLA3, CSLA03, cellulose synthase-like A3, CELLULOSE SYNTHASE-LIKE A3 |
-0.65 | 0.31 | -0.31 | ||
93 | AT3G09560 | Lipin family protein | PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1, PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 |
0.65 | 0.35 | -0.31 | ||
94 | AT4G02610 | Aldolase-type TIM barrel family protein | -0.65 | 0.34 | -0.33 | |||
95 | AT2G21180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.31 | -0.32 | |||
96 | AT1G47290 | 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 | 3beta-hydroxysteroid-dehydrogenase /decarboxylase isoform 1, 3beta-hydroxysteroid-dehydrogenase /decarboxylase isoform 1 |
-0.65 | 0.33 | -0.31 | ||
97 | AT2G19270 | CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC, C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink). |
0.65 | 0.31 | -0.3 | |||
98 | AT4G14750 | IQ-domain 19 | IQ-domain 19 | -0.65 | 0.31 | -0.33 | ||
99 | AT2G04620 | Cation efflux family protein | 0.65 | 0.31 | -0.33 | |||
100 | AT3G19540 | Protein of unknown function (DUF620) | -0.65 | 0.31 | -0.31 | |||
101 | AT3G02180 | SPIRAL1-like3 | SPIRAL1-like3 | -0.65 | 0.32 | -0.32 | ||
102 | AT3G10700 | galacturonic acid kinase | galacturonic acid kinase | -0.65 | 0.32 | -0.3 | ||
103 | AT5G16250 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.65 | 0.31 | -0.32 | |||
104 | AT1G17850 | Rhodanese/Cell cycle control phosphatase superfamily protein |
-0.65 | 0.31 | -0.33 | |||
105 | AT5G60230 | splicing endonuclease 2 | SPLICING ENDONUCLEASE 2, splicing endonuclease 2 |
-0.65 | 0.32 | -0.28 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
106 | C0252 | Threonic acid | D,L-Threonic acid | L-Threonate | ascorbic acid degradation | -0.75 | 0.45 | -0.46 | ||
107 | C0164 | MST_1596.8 | - | - | - | 0.74 | 0.44 | -0.45 | ||
108 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
0.73 | 0.3 | -0.32 | ||
109 | C0165 | MST_1688.6 | - | - | - | 0.72 | 0.47 | -0.46 | ||
110 | C0160 | MST_1509.5 | - | - | - | 0.68 | 0.45 | -0.45 | ||
111 | C0163 | MST_1589.2 | - | - | - | 0.68 | 0.47 | -0.46 | ||
112 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
0.67 | 0.3 | -0.31 | ||
113 | C0023 | 1,6-Anhydro-β-glucose | 1,6-Anhydro-β-D-glucose | Levoglucosan | - | 0.66 | 0.47 | -0.43 |