AGICode | AT1G32120 |
Description | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G32120 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). |
1 | 0.31 | -0.32 | |||
2 | AT5G22870 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.76 | 0.34 | -0.32 | |||
3 | AT4G34600 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.31 | -0.3 | |||
4 | AT2G02070 | indeterminate(ID)-domain 5 | indeterminate(ID)-domain 5, indeterminate(ID)-domain 5 |
-0.7 | 0.31 | -0.32 | ||
5 | AT3G61310 | AT hook motif DNA-binding family protein | -0.7 | 0.31 | -0.3 | |||
6 | AT2G04940 | scramblase-related | 0.69 | 0.3 | -0.3 | |||
7 | AT1G78170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.32 | -0.31 | |||
8 | AT1G43800 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
0.68 | 0.33 | -0.32 | |||
9 | AT3G49900 | Phototropic-responsive NPH3 family protein | -0.68 | 0.31 | -0.29 | |||
10 | AT4G16950 | Disease resistance protein (TIR-NBS-LRR class) family | RECOGNITION OF PERONOSPORA PARASITICA 5 |
-0.68 | 0.32 | -0.33 | ||
11 | AT3G19200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.68 | 0.3 | -0.31 | |||
12 | AT2G34910 | BEST Arabidopsis thaliana protein match is: root hair specific 4 (TAIR:AT1G30850.1); Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.33 | -0.32 | |||
13 | AT5G18430 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.67 | 0.3 | -0.36 | |||
14 | AT3G54930 | Protein phosphatase 2A regulatory B subunit family protein | -0.67 | 0.31 | -0.29 | |||
15 | AT4G13235 | embryo sac development arrest 21 | embryo sac development arrest 21 | 0.67 | 0.3 | -0.35 | ||
16 | AT1G14580 | C2H2-like zinc finger protein | -0.67 | 0.32 | -0.29 | |||
17 | AT2G39110 | Protein kinase superfamily protein | 0.66 | 0.31 | -0.31 | |||
18 | AT2G44490 | Glycosyl hydrolase superfamily protein | BETA GLUCOSIDASE 26, PENETRATION 2 | -0.66 | 0.32 | -0.31 | ||
19 | AT5G53990 | UDP-Glycosyltransferase superfamily protein | 0.66 | 0.34 | -0.3 | |||
20 | AT1G67510 | Leucine-rich repeat protein kinase family protein | -0.66 | 0.31 | -0.32 | |||
21 | AT5G63930 | Leucine-rich repeat protein kinase family protein | 0.65 | 0.29 | -0.34 | |||
22 | AT1G10060 | branched-chain amino acid transaminase 1 | branched-chain amino acid transaminase 1, branched-chain amino acid transaminase 1 |
-0.65 | 0.32 | -0.33 | ||
23 | AT2G28720 | Histone superfamily protein | -0.65 | 0.31 | -0.32 | |||
24 | AT5G55710 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
translocon at the inner envelope membrane of chloroplasts 20-V, translocon at the inner envelope membrane of chloroplasts 20-V |
-0.64 | 0.31 | -0.34 | ||
25 | AT3G15690 | Single hybrid motif superfamily protein | -0.64 | 0.33 | -0.33 | |||
26 | AT5G50250 | chloroplast RNA-binding protein 31B | chloroplast RNA-binding protein 31B |
-0.64 | 0.31 | -0.31 | ||
27 | AT5G18680 | tubby like protein 11 | tubby like protein 11, tubby like protein 11 |
-0.64 | 0.33 | -0.31 | ||
28 | AT2G46850 | Protein kinase superfamily protein | 0.64 | 0.33 | -0.3 | |||
29 | AT3G61990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
O-MTase family 3 protein | 0.64 | 0.32 | -0.31 | ||
30 | AT5G62430 | cycling DOF factor 1 | cycling DOF factor 1 | -0.64 | 0.32 | -0.32 | ||
31 | AT1G19320 | Pathogenesis-related thaumatin superfamily protein | -0.64 | 0.31 | -0.32 | |||
32 | AT2G41070 | Basic-leucine zipper (bZIP) transcription factor family protein |
ATBZIP12, DPBF4, ENHANCED EM LEVEL | 0.64 | 0.31 | -0.31 | ||
33 | AT3G10970 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.64 | 0.32 | -0.3 | |||
34 | AT3G57990 | unknown protein; Has 1497 Blast hits to 1323 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 23; Fungi - 34; Plants - 61; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink). |
-0.63 | 0.3 | -0.31 | |||
35 | AT4G22610 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.63 | 0.32 | -0.33 | |||
36 | AT4G01480 | pyrophosphorylase 5 | pyrophosphorylase 5, pyrophosphorylase 5 |
0.63 | 0.32 | -0.31 | ||
37 | AT2G22190 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
trehalose-6-phosphate phosphatase E |
-0.63 | 0.33 | -0.32 | ||
38 | AT5G25900 | GA requiring 3 | ARABIDOPSIS THALIANA ENT-KAURENE OXIDASE 1, CYTOCHROME P450 701 A3, GA requiring 3 |
0.63 | 0.32 | -0.31 | ||
39 | AT2G46950 | cytochrome P450, family 709, subfamily B, polypeptide 2 | cytochrome P450, family 709, subfamily B, polypeptide 2 |
0.63 | 0.34 | -0.32 | ||
40 | AT3G07080 | EamA-like transporter family | -0.63 | 0.32 | -0.3 | |||
41 | AT1G23560 | Domain of unknown function (DUF220) | 0.62 | 0.3 | -0.31 | |||
42 | AT4G04370 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.32 | -0.31 | |||
43 | AT3G17130 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.62 | 0.33 | -0.33 | |||
44 | AT1G08670 | ENTH/VHS family protein | 0.62 | 0.34 | -0.32 | |||
45 | AT1G50560 | cytochrome P450, family 705, subfamily A, polypeptide 25 | cytochrome P450, family 705, subfamily A, polypeptide 25 |
0.62 | 0.3 | -0.33 | ||
46 | AT1G71750 | Hypoxanthine-guanine phosphoribosyltransferase | Hypoxanthine-guanine phosphoribosyltransferase |
-0.62 | 0.33 | -0.33 | ||
47 | AT1G79510 | Uncharacterized conserved protein (DUF2358) | -0.62 | 0.31 | -0.31 | |||
48 | AT4G15093 | catalytic LigB subunit of aromatic ring-opening dioxygenase family |
0.62 | 0.34 | -0.31 | |||
49 | AT3G23960 | F-box and associated interaction domains-containing protein | -0.62 | 0.33 | -0.33 | |||
50 | AT3G48920 | myb domain protein 45 | myb domain protein 45, myb domain protein 45 |
0.62 | 0.3 | -0.32 | ||
51 | AT2G45190 | Plant-specific transcription factor YABBY family protein | ABNORMAL FLORAL ORGANS, FILAMENTOUS FLOWER, YABBY1 |
-0.62 | 0.3 | -0.31 | ||
52 | AT5G10460 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.62 | 0.34 | -0.32 | |||
53 | AT1G51805 | Leucine-rich repeat protein kinase family protein | -0.61 | 0.29 | -0.32 | |||
54 | AT3G20370 | TRAF-like family protein | 0.61 | 0.32 | -0.31 | |||
55 | AT2G29700 | pleckstrin homologue 1 | pleckstrin homologue 1, pleckstrin homologue 1 |
-0.61 | 0.29 | -0.3 | ||
56 | AT2G46960 | cytochrome P450, family 709, subfamily B, polypeptide 1 | cytochrome P450, family 709, subfamily B, polypeptide 1 |
-0.61 | 0.31 | -0.31 | ||
57 | AT2G21320 | B-box zinc finger family protein | -0.61 | 0.29 | -0.33 | |||
58 | AT2G02130 | low-molecular-weight cysteine-rich 68 | low-molecular-weight cysteine-rich 68, PDF2.3 |
-0.61 | 0.34 | -0.31 | ||
59 | AT5G61310 | Cytochrome c oxidase subunit Vc family protein | 0.6 | 0.32 | -0.32 | |||
60 | AT4G17150 | alpha/beta-Hydrolases superfamily protein | -0.6 | 0.32 | -0.31 | |||
61 | AT2G22920 | serine carboxypeptidase-like 12 | serine carboxypeptidase-like 12 | 0.6 | 0.29 | -0.3 | ||
62 | AT2G22680 | Zinc finger (C3HC4-type RING finger) family protein | WAV3 homolog 1 | 0.6 | 0.31 | -0.35 | ||
63 | AT3G08510 | phospholipase C 2 | phospholipase C 2, phospholipase C 2 |
-0.6 | 0.35 | -0.34 | ||
64 | AT3G49820 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.32 | -0.32 | |||
65 | AT5G64480 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.6 | 0.32 | -0.32 | |||
66 | AT3G46500 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.6 | 0.32 | -0.29 | |||
67 | AT3G21720 | isocitrate lyase | isocitrate lyase | 0.6 | 0.32 | -0.32 | ||
68 | AT3G62690 | AtL5 | AtL5 | -0.59 | 0.31 | -0.32 | ||
69 | AT5G02810 | pseudo-response regulator 7 | APRR7, pseudo-response regulator 7 | -0.59 | 0.33 | -0.29 | ||
70 | AT3G25400 | CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). |
0.59 | 0.31 | -0.33 | |||
71 | AT3G17440 | novel plant snare 13 | ATNPSN13, novel plant snare 13 | -0.59 | 0.33 | -0.31 | ||
72 | AT4G08690 | Sec14p-like phosphatidylinositol transfer family protein | 0.59 | 0.3 | -0.31 | |||
73 | AT3G62100 | indole-3-acetic acid inducible 30 | indole-3-acetic acid inducible 30 | 0.59 | 0.33 | -0.31 | ||
74 | AT3G52830 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G54700.1); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.59 | 0.32 | -0.32 | |||
75 | AT3G19340 | Protein of unknown function (DUF3754) | -0.59 | 0.32 | -0.31 | |||
76 | AT2G46830 | circadian clock associated 1 | AtCCA1, circadian clock associated 1 |
-0.59 | 0.32 | -0.3 | ||
77 | AT5G11740 | arabinogalactan protein 15 | arabinogalactan protein 15, ATAGP15 |
-0.59 | 0.31 | -0.34 | ||
78 | AT3G04170 | RmlC-like cupins superfamily protein | -0.59 | 0.31 | -0.33 | |||
79 | AT3G46970 | alpha-glucan phosphorylase 2 | Arabidopsis thaliana alpha-glucan phosphorylase 2, alpha-glucan phosphorylase 2 |
-0.59 | 0.32 | -0.33 | ||
80 | AT4G30650 | Low temperature and salt responsive protein family | -0.59 | 0.34 | -0.33 | |||
81 | AT3G47500 | cycling DOF factor 3 | cycling DOF factor 3 | -0.59 | 0.33 | -0.33 | ||
82 | AT5G59560 | sensitivity to red light reduced protein (SRR1) | SENSITIVITY TO RED LIGHT REDUCED 1 | 0.59 | 0.3 | -0.31 | ||
83 | AT3G24140 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
FAMA | -0.58 | 0.34 | -0.3 | ||
84 | AT5G57460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to 166 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
-0.58 | 0.3 | -0.32 | |||
85 | AT2G28900 | outer plastid envelope protein 16-1 | outer plastid envelope protein 16-1, OUTER PLASTID ENVELOPE PROTEIN 16-L, outer envelope protein 16, outer plastid envelope protein 16-1 |
-0.58 | 0.32 | -0.33 | ||
86 | AT4G17090 | chloroplast beta-amylase | BETA-AMYLASE 3, BETA-AMYLASE 8, chloroplast beta-amylase |
-0.58 | 0.32 | -0.29 | ||
87 | AT1G28360 | ERF domain protein 12 | ERF DOMAIN PROTEIN 12, ERF domain protein 12 |
0.58 | 0.31 | -0.32 | ||
88 | AT5G24300 | Glycogen/starch synthases, ADP-glucose type | STARCH SYNTHASE 1, starch synthase 1 |
-0.58 | 0.33 | -0.31 | ||
89 | AT2G10400 | transposable element gene | -0.58 | 0.32 | -0.32 | |||
90 | AT4G15130 | phosphorylcholine cytidylyltransferase2 | ATCCT2, phosphorylcholine cytidylyltransferase2 |
-0.58 | 0.32 | -0.32 | ||
91 | AT5G01070 | RING/FYVE/PHD zinc finger superfamily protein | -0.58 | 0.34 | -0.32 | |||
92 | AT1G06040 | B-box zinc finger family protein | B-box domain protein 24, SALT TOLERANCE |
-0.58 | 0.32 | -0.32 | ||
93 | AT4G16890 | disease resistance protein (TIR-NBS-LRR class), putative | BALL, SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 |
-0.58 | 0.32 | -0.32 | ||
94 | AT4G21590 | endonuclease 3 | endonuclease 3 | 0.57 | 0.31 | -0.3 | ||
95 | AT4G26100 | casein kinase 1 | casein kinase 1, CKL1 | -0.57 | 0.34 | -0.31 | ||
96 | AT5G13530 | protein kinases;ubiquitin-protein ligases | KEEP ON GOING | -0.57 | 0.28 | -0.29 | ||
97 | AT5G48250 | B-box type zinc finger protein with CCT domain | -0.57 | 0.31 | -0.31 | |||
98 | AT5G26140 | Putative lysine decarboxylase family protein | ATLOG9, LONELY GUY 9 | -0.57 | 0.33 | -0.31 | ||
99 | AT5G52050 | MATE efflux family protein | 0.57 | 0.33 | -0.31 | |||
100 | AT4G32190 | Myosin heavy chain-related protein | -0.57 | 0.31 | -0.34 | |||
101 | AT1G07280 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.57 | 0.32 | -0.34 | |||
102 | AT3G27320 | alpha/beta-Hydrolases superfamily protein | -0.57 | 0.31 | -0.3 | |||
103 | AT2G31940 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.29 | -0.32 | |||
104 | AT5G08740 | NAD(P)H dehydrogenase C1 | NAD(P)H dehydrogenase C1 | -0.57 | 0.32 | -0.34 | ||
105 | AT1G20720 | RAD3-like DNA-binding helicase protein | -0.57 | 0.3 | -0.32 | |||
106 | AT1G73630 | EF hand calcium-binding protein family | -0.57 | 0.32 | -0.29 | |||
107 | AT2G42800 | receptor like protein 29 | receptor like protein 29, receptor like protein 29 |
-0.57 | 0.31 | -0.3 | ||
108 | AT2G03830 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 8 | 0.56 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
109 | C0093 | Galactinol dihydrate | - | Galactinol | galactosylcyclitol biosynthesis, stachyose biosynthesis, ajugose biosynthesis I (galactinol-dependent) |
-0.72 | 0.46 | -0.45 | ||
110 | C0207 | Phosphatidylglycerol-34:5 | - | - | - | -0.69 | 0.5 | -0.47 | ||
111 | C0188 | Nicotine | (-)-Nicotine | Nicotine | - | 0.66 | 0.48 | -0.46 |