AGICode | AT5G13530 |
Description | protein kinases;ubiquitin-protein ligases |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G13530 | protein kinases;ubiquitin-protein ligases | KEEP ON GOING | 1 | 0.32 | -0.34 | ||
2 | AT1G22750 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). |
0.69 | 0.32 | -0.31 | |||
3 | AT3G51250 | Senescence/dehydration-associated protein-related | 0.68 | 0.32 | -0.32 | |||
4 | AT4G09100 | RING/U-box superfamily protein | -0.67 | 0.31 | -0.33 | |||
5 | AT5G06140 | sorting nexin 1 | ARABIDOPSIS THALIANA SORTING NEXIN 1, sorting nexin 1 |
0.67 | 0.33 | -0.31 | ||
6 | AT3G56240 | copper chaperone | copper chaperone | 0.66 | 0.33 | -0.3 | ||
7 | AT1G69010 | BES1-interacting Myc-like protein 2 | BES1-interacting Myc-like protein 2 |
0.66 | 0.31 | -0.32 | ||
8 | AT2G29750 | UDP-glucosyl transferase 71C1 | UDP-glucosyl transferase 71C1 | -0.65 | 0.32 | -0.32 | ||
9 | AT2G24070 | Family of unknown function (DUF566) | QWRF domain containing 4 | -0.64 | 0.31 | -0.3 | ||
10 | AT3G29780 | ralf-like 27 | ralf-like 27 | -0.64 | 0.31 | -0.33 | ||
11 | AT2G46340 | SPA (suppressor of phyA-105) protein family | SUPPRESSOR OF PHYA-105 1 | 0.64 | 0.33 | -0.33 | ||
12 | AT1G61700 | RNA polymerases N / 8 kDa subunit | 0.64 | 0.33 | -0.31 | |||
13 | AT4G20770 | Pentatricopeptide repeat (PPR) superfamily protein | -0.64 | 0.31 | -0.33 | |||
14 | AT1G73670 | MAP kinase 15 | MAP kinase 15, MAP kinase 15 | 0.64 | 0.3 | -0.31 | ||
15 | AT4G16780 | homeobox protein 2 | homeobox protein 2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, homeobox protein 2 |
0.64 | 0.31 | -0.32 | ||
16 | AT1G31440 | SH3 domain-containing protein | 0.63 | 0.31 | -0.33 | |||
17 | AT5G51160 | Ankyrin repeat family protein | -0.63 | 0.31 | -0.3 | |||
18 | AT4G08730 | RNA-binding protein | 0.63 | 0.33 | -0.32 | |||
19 | AT3G07130 | purple acid phosphatase 15 | PURPLE ACID PHOSPHATASE 15, purple acid phosphatase 15 |
-0.63 | 0.32 | -0.32 | ||
20 | AT5G66160 | receptor homology region transmembrane domain ring H2 motif protein 1 |
ARABIDOPSIS THALIANA RECEPTOR HOMOLOGY REGION TRANSMEMBRANE DOMAIN RING H2 MOTIF PROTEIN 1, receptor homology region transmembrane domain ring H2 motif protein 1 |
0.62 | 0.29 | -0.3 | ||
21 | AT4G03770 | transposable element gene | 0.62 | 0.31 | -0.3 | |||
22 | AT3G46500 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.62 | 0.3 | -0.3 | |||
23 | AT5G54855 | Pollen Ole e 1 allergen and extensin family protein | 0.61 | 0.3 | -0.31 | |||
24 | AT4G00630 | K+ efflux antiporter 2 | ATKEA2, K+ efflux antiporter 2 | 0.61 | 0.31 | -0.33 | ||
25 | AT1G47680 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.31 | -0.31 | |||
26 | AT3G08510 | phospholipase C 2 | phospholipase C 2, phospholipase C 2 |
0.61 | 0.31 | -0.34 | ||
27 | AT3G50230 | Leucine-rich repeat protein kinase family protein | -0.61 | 0.3 | -0.33 | |||
28 | AT4G34320 | Protein of unknown function (DUF677) | -0.61 | 0.32 | -0.29 | |||
29 | AT5G17530 | phosphoglucosamine mutase family protein | 0.61 | 0.29 | -0.32 | |||
30 | AT1G07290 | golgi nucleotide sugar transporter 2 | golgi nucleotide sugar transporter 2 |
-0.61 | 0.29 | -0.32 | ||
31 | AT5G02040 | prenylated RAB acceptor 1.A1 | prenylated RAB acceptor 1.A1 | 0.6 | 0.31 | -0.3 | ||
32 | AT4G04560 | transposable element gene | 0.6 | 0.31 | -0.31 | |||
33 | AT4G18860 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.29 | -0.3 | |||
34 | AT5G06440 | BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT3G11720.3); Has 155 Blast hits to 153 proteins in 39 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 6; Plants - 101; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). |
0.6 | 0.32 | -0.32 | |||
35 | AT2G10950 | BSD domain-containing protein | 0.6 | 0.29 | -0.31 | |||
36 | AT3G45330 | Concanavalin A-like lectin protein kinase family protein | 0.6 | 0.31 | -0.31 | |||
37 | AT1G01200 | RAB GTPase homolog A3 | ARABIDOPSIS RAB GTPASE HOMOLOG A3, RAB GTPase homolog A3, RAB GTPase homolog A3 |
-0.6 | 0.32 | -0.32 | ||
38 | AT4G15200 | formin 3 | formin 3, formin 3 | 0.6 | 0.32 | -0.31 | ||
39 | AT1G48180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits to 39 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.32 | |||
40 | AT3G22870 | F-box and associated interaction domains-containing protein | 0.6 | 0.3 | -0.31 | |||
41 | AT5G51670 | Protein of unknown function (DUF668) | -0.59 | 0.32 | -0.32 | |||
42 | AT3G50190 | Plant protein of unknown function (DUF247) | -0.59 | 0.32 | -0.29 | |||
43 | AT1G55200 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
-0.59 | 0.31 | -0.31 | |||
44 | AT1G65210 | Galactose-binding protein | 0.59 | 0.33 | -0.32 | |||
45 | AT2G06090 | Plant self-incompatibility protein S1 family | 0.59 | 0.31 | -0.31 | |||
46 | AT5G29020 | transposable element gene | 0.59 | 0.31 | -0.3 | |||
47 | AT5G11570 | Major facilitator superfamily protein | -0.58 | 0.31 | -0.33 | |||
48 | AT2G22750 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.58 | 0.33 | -0.33 | |||
49 | AT2G46960 | cytochrome P450, family 709, subfamily B, polypeptide 1 | cytochrome P450, family 709, subfamily B, polypeptide 1 |
0.58 | 0.32 | -0.3 | ||
50 | AT5G26700 | RmlC-like cupins superfamily protein | -0.58 | 0.31 | -0.3 | |||
51 | AT1G42700 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold; LOCATED IN: nucleus; BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.29 | -0.32 | |||
52 | AT4G16570 | protein arginine methyltransferase 7 | ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 7, protein arginine methyltransferase 7 |
-0.58 | 0.32 | -0.32 | ||
53 | AT1G22420 | hydroxyproline-rich glycoprotein family protein | -0.58 | 0.31 | -0.33 | |||
54 | AT5G65370 | ENTH/ANTH/VHS superfamily protein | 0.57 | 0.3 | -0.32 | |||
55 | AT3G47590 | alpha/beta-Hydrolases superfamily protein | 0.57 | 0.32 | -0.32 | |||
56 | AT5G52690 | Copper transport protein family | 0.57 | 0.31 | -0.35 | |||
57 | AT1G28470 | NAC domain containing protein 10 | NAC domain containing protein 10, NAC domain containing protein 10, SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 3 |
0.57 | 0.33 | -0.3 | ||
58 | AT1G05900 | endonuclease III 2 | ATNTH2, endonuclease III 2 | 0.57 | 0.29 | -0.31 | ||
59 | AT3G28610 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.57 | 0.3 | -0.33 | |||
60 | AT2G35170 | Histone H3 K4-specific methyltransferase SET7/9 family protein |
-0.57 | 0.31 | -0.31 | |||
61 | AT4G32630 | ArfGap/RecO-like zinc finger domain-containing protein | 0.57 | 0.31 | -0.32 | |||
62 | ATMG00050 | hypothetical protein | ORF131 | 0.57 | 0.29 | -0.3 | ||
63 | AT1G32120 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). |
-0.57 | 0.32 | -0.3 | |||
64 | AT1G47660 | unknown protein; Has 5165 Blast hits to 2753 proteins in 450 species: Archae - 12; Bacteria - 1193; Metazoa - 731; Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes - 1931 (source: NCBI BLink). |
-0.56 | 0.3 | -0.33 | |||
65 | AT3G16620 | translocon outer complex protein 120 | ARABIDOPSIS THALIANA TRANSLOCON OUTER COMPLEX PROTEIN 120, translocon outer complex protein 120 |
-0.56 | 0.32 | -0.31 | ||
66 | AT1G52500 | MUTM homolog-1 | A. THALIANA FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1, FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 2, MUTM homolog-1, ATMMH-2, FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1, FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 2, MUTM homolog-1, MMH-2 |
-0.55 | 0.31 | -0.33 | ||
67 | AT4G09110 | RING/U-box superfamily protein | -0.55 | 0.31 | -0.32 | |||
68 | AT3G30190 | transposable element gene | -0.55 | 0.31 | -0.31 | |||
69 | AT4G22020 | pseudogene, hypothetical protein, similar to uncharacterized glycine-rich protein (GI:7269047) {Arabidopsis thaliana} |
-0.54 | 0.3 | -0.32 | |||
70 | AT5G09290 | Inositol monophosphatase family protein | -0.54 | 0.3 | -0.31 | |||
71 | AT4G04650 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
-0.54 | 0.32 | -0.31 | |||
72 | AT2G22390 | pseudogene, putative GTP-binding protein, similar to GTP-binding protein GI:303738 from (Pisum sativum); blastp match of 75% identity and 3.6e-56 P-value to GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum sativum} |
ATRABA4E, RAB GTPase homolog A4E | -0.54 | 0.31 | -0.32 | ||
73 | AT1G32930 | Galactosyltransferase family protein | -0.53 | 0.3 | -0.31 | |||
74 | AT3G54000 | CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.32 | -0.35 | |||
75 | AT4G31750 | HOPW1-1-interacting 2 | HOPW1-1-interacting 2 | -0.53 | 0.31 | -0.3 | ||
76 | AT3G20210 | delta vacuolar processing enzyme | delta vacuolar processing enzyme, DELTA VACUOLAR PROCESSING ENZYME |
-0.53 | 0.33 | -0.34 | ||
77 | AT2G46730 | pseudogene, similar to 68 kDa protein, blastp match of 68% identity and 4.7e-17 P-value to GP|7271113|emb|CAB81547.1||AJ276420 68 kDa protein {Cicer arietinum} |
-0.53 | 0.36 | -0.33 | |||
78 | AT1G44224 | ECA1 gametogenesis related family protein | -0.53 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
79 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
0.6 | 0.43 | -0.44 |