AT5G28290 : NIMA-related kinase 3
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G28290
Description NIMA-related kinase 3
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G28290 NIMA-related kinase 3 NIMA-related kinase 3,
NIMA-related kinase 3		 1 0.31 -0.3
2 AT1G63850 BTB/POZ domain-containing protein 0.8 0.3 -0.33
3 AT2G17510 ribonuclease II family protein EMBRYO DEFECTIVE 2763 0.7 0.3 -0.32
4 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 0.7 0.32 -0.33
5 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 0.67 0.3 -0.34
6 AT2G05920 Subtilase family protein 0.66 0.32 -0.31
7 AT1G63670 Protein of unknown function (DUF3741) 0.66 0.3 -0.32
8 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.66 0.31 -0.32
9 AT5G22750 DNA/RNA helicase protein RAD5, RAD5A 0.65 0.32 -0.34
10 AT5G46750 ARF-GAP domain 9 ARF-GAP domain 9 -0.64 0.29 -0.34
11 AT2G38770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 EMBRYO DEFECTIVE 2765 0.64 0.33 -0.32
12 AT1G63470 AT hook motif DNA-binding family protein 0.64 0.3 -0.3
13 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 0.63 0.35 -0.32
14 AT1G63430 Leucine-rich repeat protein kinase family protein 0.63 0.32 -0.31
15 AT1G62350 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.31 -0.32
16 AT5G46760 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC3 -0.63 0.32 -0.32
17 AT1G63690 SIGNAL PEPTIDE PEPTIDASE-LIKE 2 SIGNAL PEPTIDE PEPTIDASE-LIKE 2,
SIGNAL PEPTIDE PEPTIDASE-LIKE 2		 0.62 0.33 -0.29
18 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.32 -0.32
19 AT1G74870 RING/U-box superfamily protein 0.62 0.32 -0.33
20 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.62 0.3 -0.3
21 AT5G25060 RNA recognition motif (RRM)-containing protein 0.62 0.3 -0.32
22 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 -0.62 0.31 -0.33
23 AT4G00780 TRAF-like family protein -0.61 0.3 -0.32
24 AT5G19700 MATE efflux family protein 0.61 0.31 -0.32
25 AT4G21100 damaged DNA binding protein 1B damaged DNA binding protein 1B -0.61 0.33 -0.32
26 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B -0.61 0.32 -0.33
27 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.61 0.3 -0.3
28 AT5G58220 transthyretin-like protein allantoin synthase,
transthyretin-like protein		 -0.61 0.3 -0.3
29 AT2G36350 Protein kinase superfamily protein 0.6 0.3 -0.3
30 AT1G79630 Protein phosphatase 2C family protein 0.6 0.32 -0.3
31 AT2G18270 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.3 -0.32
32 AT4G02980 endoplasmic reticulum auxin binding protein 1 ABP, endoplasmic reticulum auxin
binding protein 1		 -0.6 0.3 -0.29
33 AT5G07570 glycine/proline-rich protein -0.6 0.33 -0.31
34 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 -0.6 0.33 -0.33
35 AT4G01920 Cysteine/Histidine-rich C1 domain family protein 0.6 0.31 -0.34
36 AT1G74650 myb domain protein 31 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 31, ATY13, myb domain
protein 31		 0.59 0.31 -0.3
37 AT3G32180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32160.1); Has 37 Blast hits
to 25 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.31 -0.31
38 AT1G06590 unknown protein; Has 380 Blast hits to 268 proteins in 109
species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi -
73; Plants - 49; Viruses - 0; Other Eukaryotes - 13
(source: NCBI BLink).		 0.59 0.31 -0.3
39 AT1G07300 josephin protein-related -0.59 0.32 -0.33
40 AT1G63500 Protein kinase protein with tetratricopeptide repeat domain 0.59 0.31 -0.31
41 AT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2745 0.59 0.31 -0.32
42 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.59 0.33 -0.31
43 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 0.58 0.31 -0.31
44 AT5G04290 kow domain-containing transcription factor 1 kow domain-containing
transcription factor 1, SPT5-LIKE		 0.58 0.32 -0.3
45 AT3G45710 Major facilitator superfamily protein -0.58 0.33 -0.31
46 AT4G36050 endonuclease/exonuclease/phosphatase family protein 0.58 0.32 -0.32
47 AT2G42040 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has
219 Blast hits to 219 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.58 0.3 -0.33
48 AT2G13230 transposable element gene 0.58 0.3 -0.33
49 AT5G03200 RING/U-box superfamily protein 0.58 0.33 -0.31
50 AT5G35450 Disease resistance protein (CC-NBS-LRR class) family 0.57 0.32 -0.31
51 AT5G51170 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0406
(InterPro:IPR019146); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.57 0.32 -0.29
52 AT1G58290 Glutamyl-tRNA reductase family protein Arabidopsis thaliana hemA 1, HEMA1 0.57 0.31 -0.33
53 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.57 0.3 -0.34
54 AT3G43920 dicer-like 3 DICER-LIKE 3, dicer-like 3 0.57 0.33 -0.31
55 AT4G13460 SU(VAR)3-9 homolog 9 SETDOMAIN GROUP 22, SET22,
SU(VAR)3-9 homolog 9		 0.56 0.32 -0.32
56 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.29 -0.32
57 AT3G51560 Disease resistance protein (TIR-NBS-LRR class) family -0.56 0.32 -0.32
58 ATMG00450 hypothetical protein ORF106B -0.56 0.33 -0.31
59 AT5G58530 Glutaredoxin family protein 0.56 0.3 -0.31
60 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 -0.56 0.32 -0.31
61 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.56 0.31 -0.31
62 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.56 0.3 -0.31
63 AT1G72410 COP1-interacting protein-related 0.55 0.29 -0.34
64 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 -0.55 0.33 -0.3
65 AT1G22460 O-fucosyltransferase family protein -0.55 0.29 -0.31
66 AT2G03520 ureide permease 4 ureide permease 4, ureide permease
4		 0.55 0.32 -0.32
67 AT1G73400 Pentatricopeptide repeat (PPR) superfamily protein 0.55 0.33 -0.31
68 AT5G60800 Heavy metal transport/detoxification superfamily protein -0.55 0.34 -0.3
69 AT3G18850 lysophosphatidyl acyltransferase 5 lysophosphatidyl acyltransferase 5 0.55 0.31 -0.32
70 AT4G11190 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.55 0.33 -0.34
71 AT3G28150 TRICHOME BIREFRINGENCE-LIKE 22 ALTERED XYLOGLUCAN 4-LIKE,
TRICHOME BIREFRINGENCE-LIKE 22		 0.54 0.3 -0.31
72 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.54 0.33 -0.3
73 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.32 -0.3
74 AT4G18670 Leucine-rich repeat (LRR) family protein 0.54 0.32 -0.31
75 AT4G19670 RING/U-box superfamily protein -0.54 0.3 -0.28
76 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 0.54 0.32 -0.3
77 AT5G48000 cytochrome P450, family 708, subfamily A, polypeptide 2 CYTOCHROME P450, FAMILY 708,
SUBFAMILY A, POLYPEPTIDE 2,
cytochrome P450, family 708,
subfamily A, polypeptide 2,
THALIANOL HYDROXYLASE, THALIANOL
HYDROXYLASE 1		 -0.53 0.34 -0.32
78 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.53 0.35 -0.32
79 AT3G08670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast
hits to 29827 proteins in 1356 species: Archae - 46;
Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants -
2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI
BLink).		 0.53 0.32 -0.29
80 AT4G16710 glycosyltransferase family protein 28 -0.53 0.33 -0.32
81 AT5G48340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.3 -0.31
82 AT3G07340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.53 0.33 -0.31
83 AT4G08320 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 8 -0.53 0.31 -0.32
84 AT1G59530 basic leucine-zipper 4 basic leucine-zipper 4, basic
leucine-zipper 4		 0.53 0.31 -0.32
85 AT4G21090 MITOCHONDRIAL FERREDOXIN 2 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 2, MITOCHONDRIAL
FERREDOXIN 2		 -0.52 0.32 -0.35
86 AT5G53030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF688 (InterPro:IPR007789); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.51 0.31 -0.34
87 AT5G44720 Molybdenum cofactor sulfurase family protein -0.51 0.3 -0.31
88 AT3G01290 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 AtHIR2, hypersensitive induced
reaction 2		 -0.51 0.31 -0.29
89 AT4G39940 APS-kinase 2 APS-kinase 2,
ADENOSINE-5'-PHOSPHOSULFATE (APS)
KINASE 2		 -0.51 0.31 -0.31
90 AT2G29250 Concanavalin A-like lectin protein kinase family protein -0.5 0.32 -0.31
91 AT1G52600 Peptidase S24/S26A/S26B/S26C family protein -0.5 0.33 -0.3
92 AT3G32917 transposable element gene -0.5 0.31 -0.29
93 AT2G10140 transposable element gene -0.49 0.32 -0.3
94 AT5G05490 Rad21/Rec8-like family protein ATREC8, DETERMINATE, INFERTILE 1,
REC8, SYNAPTIC 1		 -0.49 0.3 -0.32
95 AT4G15870 terpene synthase 1 terpene synthase 1, terpene
synthase 1		 -0.49 0.32 -0.32
96 AT5G57140 purple acid phosphatase 28 PURPLE ACID PHOSPHATASE 28, purple
acid phosphatase 28		 -0.49 0.32 -0.28
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0086 Disinapylspermidine - - - 0.74 0.43 -0.46
98 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.71 0.4 -0.43 C0012
99 C0214 PR_MST_2412.1 - - - 0.67 0.43 -0.45
100 C0213 PR_MST_2410.2 - - - 0.66 0.43 -0.46
101 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		0.65 0.41 -0.42 C0001
102 C0044 7-Methylsulfinyl-n-heptylglucosinolate - 7-Methylsulfinylheptyl glucosinolate glucosinolate biosynthesis from pentahomomethionine 0.56 0.3 -0.3 C0044
103 C0068 Citric acid - Citrate acetyl-CoA biosynthesis (from citrate),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.5 0.32 -0.3 C0068