AT5G09380 : -
Query Information
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AGICode AT5G09380
Description RNA polymerase III RPC4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G09380 RNA polymerase III RPC4 1 0.34 -0.34
2 AT3G58180 ARM repeat superfamily protein 0.78 0.33 -0.3
3 AT1G71980 Protease-associated (PA) RING/U-box zinc finger family
protein		 -0.75 0.31 -0.34
4 AT5G30490 CONTAINS InterPro DOMAIN/s: Craniofacial development
protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast
hits to 324 proteins in 149 species: Archae - 0; Bacteria -
18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0;
Other Eukaryotes - 53 (source: NCBI BLink).		 0.74 0.31 -0.3
5 AT3G09880 Protein phosphatase 2A regulatory B subunit family protein ATB' BETA 0.72 0.29 -0.31
6 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.32 -0.32
7 AT2G35390 Phosphoribosyltransferase family protein 0.72 0.31 -0.31
8 AT5G60870 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 3 0.72 0.32 -0.31
9 AT5G08590 SNF1-related protein kinase 2.1 ARABIDOPSIS SERINE/THREONINE
KINASE 2, ARABIDOPSIS SKP1-LIKE1,
SNRK2-1, SNF1-related protein
kinase 2.1, SRK2G		 -0.71 0.3 -0.3
10 AT1G06460 alpha-crystallin domain 32.1 ALPHA-CRYSTALLIN DOMAIN 31.2,
alpha-crystallin domain 32.1		 -0.71 0.31 -0.32
11 AT5G18920 Cox19-like CHCH family protein 0.7 0.3 -0.34
12 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 0.69 0.33 -0.33
13 AT3G54390 sequence-specific DNA binding transcription factors -0.69 0.33 -0.33
14 AT4G03560 two-pore channel 1 CALCIUM CHANNEL 1, two-pore
channel 1, FATTY ACID OXYGENATION
UPREGULATED 2, TPC1, two-pore
channel 1		 -0.67 0.3 -0.33
15 AT2G45240 methionine aminopeptidase 1A methionine aminopeptidase 1A 0.67 0.31 -0.31
16 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 -0.67 0.32 -0.3
17 AT2G20280 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.67 0.31 -0.31
18 AT5G51210 oleosin3 oleosin3 -0.67 0.32 -0.3
19 AT3G26740 CCR-like CCR-like -0.67 0.32 -0.31
20 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 0.66 0.32 -0.33
21 AT1G79420 Protein of unknown function (DUF620) -0.66 0.34 -0.31
22 AT3G14750 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67170.1); Has 4036 Blast hits
to 3091 proteins in 519 species: Archae - 61; Bacteria -
669; Metazoa - 1503; Fungi - 255; Plants - 421; Viruses -
4; Other Eukaryotes - 1123 (source: NCBI BLink).		 0.66 0.32 -0.31
23 AT1G56600 galactinol synthase 2 galactinol synthase 2, galactinol
synthase 2		 -0.65 0.32 -0.32
24 AT5G01930 Glycosyl hydrolase superfamily protein AtMAN6, endo-beta-mannase 6 -0.65 0.3 -0.31
25 AT3G52450 plant U-box 22 plant U-box 22 0.65 0.34 -0.31
26 AT5G65970 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 10,
MILDEW RESISTANCE LOCUS O 10		 0.65 0.33 -0.32
27 AT3G55020 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.65 0.32 -0.32
28 AT5G47390 myb-like transcription factor family protein -0.65 0.32 -0.33
29 AT4G07640 transposable element gene 0.65 0.32 -0.31
30 AT3G49640 Aldolase-type TIM barrel family protein 0.65 0.32 -0.33
31 AT1G16650 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.64 0.31 -0.31
32 AT1G49830 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.64 0.3 -0.31
33 AT5G23750 Remorin family protein -0.64 0.32 -0.32
34 AT4G37220 Cold acclimation protein WCOR413 family -0.64 0.32 -0.33
35 AT3G05070 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18
(InterPro:IPR013169); Has 292 Blast hits to 292 proteins in
153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi
- 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42
(source: NCBI BLink).		 0.64 0.31 -0.31
36 AT1G17000 trehalose-phosphatase/synthase 3 trehalose-phosphatase/synthase 3,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S3, trehalose-phosphatase/synthase
3		 0.64 0.31 -0.31
37 AT1G35320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30160.1); Has 9 Blast hits to
9 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.3 -0.31
38 AT1G16190 Rad23 UV excision repair protein family RADIATION SENSITIVE23A 0.64 0.33 -0.32
39 AT3G43040 transposable element gene -0.64 0.32 -0.32
40 AT3G04460 peroxin-12 ABERRANT PEROXISOME MORPHOLOGY 4,
PEROXIN-12, peroxin-12		 0.64 0.33 -0.31
41 AT1G24450 Ribonuclease III family protein NUCLEAR FUSION DEFECTIVE 2 -0.64 0.3 -0.31
42 AT5G10290 leucine-rich repeat transmembrane protein kinase family
protein		 0.63 0.31 -0.32
43 AT3G05320 O-fucosyltransferase family protein 0.63 0.31 -0.33
44 AT2G22160 Cysteine proteinases superfamily protein 0.63 0.31 -0.34
45 AT1G31750 proline-rich family protein -0.63 0.32 -0.3
46 AT1G53080 Legume lectin family protein -0.63 0.32 -0.32
47 AT4G14270 Protein containing PAM2 motif which mediates interaction
with the PABC domain of polyadenyl binding proteins.		 -0.63 0.31 -0.3
48 AT2G34850 NAD(P)-binding Rossmann-fold superfamily protein maternal effect embryo arrest 25 -0.62 0.33 -0.32
49 AT5G57450 homolog of X-ray repair cross complementing 3 (XRCC3) ARABIDOPSIS THALIANA HOMOLOG OF
X-RAY REPAIR CROSS COMPLEMENTING 3
(XRCC3), homolog of X-ray repair
cross complementing 3 (XRCC3)		 0.62 0.31 -0.32
50 AT2G15420 myosin heavy chain-related 0.62 0.32 -0.31
51 AT3G44700 Plant protein of unknown function 0.62 0.31 -0.31
52 AT4G13480 myb domain protein 79 myb domain protein 79, myb domain
protein 79		 -0.62 0.33 -0.3
53 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 -0.62 0.33 -0.31
54 AT1G76860 Small nuclear ribonucleoprotein family protein 0.62 0.31 -0.3
55 AT1G68610 PLANT CADMIUM RESISTANCE 11 PLANT CADMIUM RESISTANCE 11 -0.62 0.32 -0.32
56 AT5G07550 glycine-rich protein 19 ATGRP19, glycine-rich protein 19 0.62 0.33 -0.3
57 AT4G37970 cinnamyl alcohol dehydrogenase 6 ATCAD6, cinnamyl alcohol
dehydrogenase 6		 -0.61 0.31 -0.29
58 AT2G44810 alpha/beta-Hydrolases superfamily protein DEFECTIVE ANTHER DEHISCENCE 1 0.61 0.33 -0.31
59 AT5G37300 O-acyltransferase (WSD1-like) family protein WSD1 -0.61 0.3 -0.34
60 AT3G07860 Ubiquitin-like superfamily protein 0.61 0.31 -0.32
61 AT5G15610 Proteasome component (PCI) domain protein 0.61 0.32 -0.3
62 AT4G16750 Integrase-type DNA-binding superfamily protein -0.61 0.31 -0.32
63 AT1G72560 ARM repeat superfamily protein PAUSED 0.61 0.31 -0.3
64 AT4G21400 cysteine-rich RLK (RECEPTOR-like protein kinase) 28 cysteine-rich RLK (RECEPTOR-like
protein kinase) 28		 0.61 0.3 -0.33
65 AT1G16490 myb domain protein 58 MYB DOMAIN PROTEIN 58, myb domain
protein 58		 -0.61 0.32 -0.31
66 AT1G12830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 39778
Blast hits to 22088 proteins in 1060 species: Archae - 152;
Bacteria - 6161; Metazoa - 14109; Fungi - 6144; Plants -
2156; Viruses - 601; Other Eukaryotes - 10455 (source: NCBI
BLink).		 0.61 0.3 -0.33
67 AT4G29190 Zinc finger C-x8-C-x5-C-x3-H type family protein Arabidopsis thaliana
oxidation-related zinc finger 2,
oxidation-related zinc finger 2		 -0.61 0.33 -0.31
68 AT5G57160 DNA ligase IV ATLIG4, DNA LIGASE IV 0.61 0.32 -0.31
69 AT2G05290 transposable element gene -0.6 0.34 -0.32
70 AT4G28240 Wound-responsive family protein -0.6 0.29 -0.3
71 AT4G18850 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.33
72 AT4G20350 oxidoreductases 0.6 0.32 -0.3
73 AT2G04305 Magnesium transporter CorA-like family protein 0.59 0.34 -0.31
74 AT4G16090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G45930.1); Has 76 Blast hits to 76
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.31 -0.3
75 AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE4, IRREGULAR XYLEM 6 -0.59 0.31 -0.33
76 AT3G22440 FRIGIDA-like protein -0.59 0.32 -0.33
77 AT4G13000 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.59 0.31 -0.3
78 AT1G22640 myb domain protein 3 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 3, myb domain protein 3		 -0.59 0.33 -0.3
79 AT3G26680 DNA repair metallo-beta-lactamase family protein SENSITIVE TO NITROGEN MUSTARD 1,
SENSITIVE TO NITROGEN MUSTARD 1		 0.58 0.33 -0.33
80 AT2G14420 transposable element gene 0.58 0.29 -0.31
81 AT5G60080 Protein kinase superfamily protein 0.58 0.31 -0.32
82 AT3G18230 Octicosapeptide/Phox/Bem1p family protein 0.58 0.33 -0.31
83 AT2G25780 Protein of unknown function (DUF1677) 0.58 0.32 -0.29
84 AT2G15600 transposable element gene 0.58 0.29 -0.31
85 AT1G27190 Leucine-rich repeat protein kinase family protein -0.58 0.31 -0.32
86 AT5G28440 unknown protein -0.58 0.32 -0.32
87 AT4G00440 Protein of unknown function (DUF3741) -0.58 0.32 -0.31
88 AT3G56960 phosphatidyl inositol monophosphate 5 kinase 4 phosphatidyl inositol
monophosphate 5 kinase 4		 0.58 0.32 -0.31
89 AT1G45180 RING/U-box superfamily protein 0.58 0.31 -0.31
90 AT3G03900 adenosine-5'-phosphosulfate (APS) kinase 3 adenosine-5'-phosphosulfate (APS)
kinase 3		 -0.58 0.29 -0.32
91 AT1G25380 NAD+ transporter 2 ARABIDOPSIS THALIANA NAD+
TRANSPORTER 2, NAD+ transporter 2		 0.58 0.31 -0.3
92 AT5G60720 Protein of unknown function, DUF547 -0.58 0.32 -0.32
93 AT3G16920 chitinase-like protein 2 ATCTL2, chitinase-like protein 2 -0.57 0.33 -0.3
94 AT3G24060 Plant self-incompatibility protein S1 family 0.57 0.31 -0.33
95 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.57 0.34 -0.33
96 AT3G47840 Tetratricopeptide repeat (TPR)-like superfamily protein 0.57 0.33 -0.3
97 AT2G04630 RNA polymerase Rpb6 NRPB6B, NRPE6B 0.57 0.3 -0.31
98 AT5G60680 Protein of unknown function, DUF584 -0.57 0.32 -0.32
99 AT2G04240 RING/U-box superfamily protein XERICO -0.57 0.32 -0.31
100 AT4G05140 Nucleoside transporter family protein -0.57 0.32 -0.31
101 AT5G48150 GRAS family transcription factor phytochrome a signal transduction
1		 -0.57 0.32 -0.3
102 AT3G08000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.57 0.31 -0.32
103 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL -0.57 0.3 -0.33
104 AT3G55530 RING/U-box superfamily protein SALT- AND DROUGHT-INDUCED RING
FINGER1		 -0.57 0.3 -0.32
105 AT5G55910 D6 protein kinase D6 protein kinase -0.57 0.3 -0.31
106 AT1G22830 Tetratricopeptide repeat (TPR)-like superfamily protein 0.56 0.3 -0.31
107 AT1G47340 F-box and associated interaction domains-containing protein -0.56 0.31 -0.33
108 AT5G22500 fatty acid reductase 1 fatty acid reductase 1 -0.56 0.33 -0.31
109 AT4G17785 myb domain protein 39 myb domain protein 39 0.56 0.33 -0.32
110 AT1G80620 S15/NS1, RNA-binding protein 0.56 0.29 -0.28
111 AT1G79200 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.56 0.3 -0.31
112 AT2G26350 peroxin 10 ATPEX10, peroxin 10 0.56 0.35 -0.31
113 AT5G09490 Ribosomal protein S19 family protein -0.56 0.32 -0.32
114 AT2G29040 Exostosin family protein -0.56 0.3 -0.33