AT5G28760 : -
Query Information
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AGICode AT5G28760
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G28760 transposable element gene 1 0.32 -0.31
2 AT4G12990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 4 Blast hits to 4
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.67 0.33 -0.33
3 AT1G08980 amidase 1 amidase 1, AMIDASE-LIKE PROTEIN 1,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-I, TRANSLOCON AT THE OUTER
MEMBRANE OF CHLOROPLASTS 64-I		 0.65 0.3 -0.3
4 AT5G25210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.32 -0.32
5 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 -0.6 0.31 -0.33
6 AT3G17490 F-box and associated interaction domains-containing protein 0.57 0.32 -0.32
7 AT1G15850 Transducin/WD40 repeat-like superfamily protein 0.56 0.31 -0.32
8 AT2G39620 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.31 -0.34
9 AT5G46770 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.55 0.34 -0.31
10 AT1G75870 unknown protein; Has 10 Blast hits to 10 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.33 -0.33
11 AT2G12870 transposable element gene 0.54 0.31 -0.32
12 AT1G77980 AGAMOUS-like 66 AGAMOUS-like 66 0.54 0.31 -0.3
13 AT5G30440 transposable element gene 0.54 0.3 -0.34
14 AT4G05510 transposable element gene 0.52 0.3 -0.32
15 AT1G34100 choline kinase, putative, similar to choline kinase
(GmCK2p) GI:1438881 from (Glycine max); contains Pfam
profile PF01633: Choline/ethanolamine kinase; could not
find a suitable start codon; this may be a pseudogene, a
transposon insertion is found immediately upstream.		 0.52 0.31 -0.32
16 AT4G03800 transposable element gene 0.52 0.32 -0.32
17 AT5G59370 actin 4 actin 4 0.52 0.3 -0.34
18 AT5G40130 60S ribosomal protein L5 (RPL5C), pseudogene, 60S RIBOSOMAL
PROTEIN L5, Arabidopsis thaliana, SWISSPROT:RL5_ARATH;
blastp match of 70% identity and 7.9e-26 P-value to
GP|13359453|dbj|BAB33422.1||AB049724 putative
senescence-associated protein {Pisum sativum}		 -0.51 0.31 -0.32
19 AT1G60180 pseudogene of F-box family protein 0.51 0.31 -0.31
20 AT4G01890 Pectin lyase-like superfamily protein 0.51 0.32 -0.33
21 AT5G14870 cyclic nucleotide-gated channel 18 CYCLIC NUCLEOTIDE-GATED CHANNEL
18, cyclic nucleotide-gated
channel 18		 -0.51 0.31 -0.3
22 AT2G41160 Ubiquitin-associated (UBA) protein -0.5 0.3 -0.33
23 AT2G19150 Pectin lyase-like superfamily protein 0.5 0.3 -0.32
24 AT4G21800 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 quatre-quart2 -0.5 0.34 -0.31
25 AT1G50050 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.49 0.31 -0.31
26 AT5G05490 Rad21/Rec8-like family protein ATREC8, DETERMINATE, INFERTILE 1,
REC8, SYNAPTIC 1		 0.49 0.31 -0.31
27 AT1G60020 transposable element gene 0.49 0.34 -0.34
28 AT5G41490 F-box associated ubiquitination effector family protein 0.48 0.33 -0.29
29 AT2G21420 IBR domain containing protein 0.48 0.32 -0.32
30 AT3G03750 SET domain protein 20 SET domain protein 20, SUVR3 -0.48 0.32 -0.31
31 AT3G27070 translocase outer membrane 20-1 translocase outer membrane 20-1 0.48 0.32 -0.33
32 AT3G26390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39782.1); Has 16 Blast hits
to 16 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.47 0.32 -0.32
33 AT5G35270 transposable element gene -0.46 0.33 -0.31
34 AT1G72350 MADS-box transcription factor family protein -0.46 0.3 -0.31
35 AT2G32370 homeodomain GLABROUS 3 homeodomain GLABROUS 3 -0.45 0.32 -0.33
36 AT2G13900 Cysteine/Histidine-rich C1 domain family protein -0.44 0.32 -0.31
37 AT3G04360 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.44 0.33 -0.32
38 AT3G45540 RING/U-box protein with C6HC-type zinc finger -0.41 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
39 C0103 Glutaric acid - - - -0.71 0.48 -0.44