AT5G20690 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G20690
Description Leucine-rich repeat protein kinase family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G20690 Leucine-rich repeat protein kinase family protein 1 0.31 -0.33
2 AT3G11870 Endoribonuclease/protein kinase IRE1-like 0.77 0.33 -0.32
3 AT2G24320 alpha/beta-Hydrolases superfamily protein 0.76 0.32 -0.33
4 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein
0.75 0.32 -0.3
5 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11
0.75 0.33 -0.33
6 AT5G39560 Galactose oxidase/kelch repeat superfamily protein 0.74 0.32 -0.31
7 AT4G03860 transposable element gene -0.74 0.32 -0.32
8 AT3G44830 Lecithin:cholesterol acyltransferase family protein -0.74 0.32 -0.31
9 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1
0.73 0.33 -0.33
10 AT2G06230 transposable element gene 0.73 0.31 -0.31
11 AT2G19200 unknown protein 0.72 0.31 -0.31
12 AT1G11070 BEST Arabidopsis thaliana protein match is:
Hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in
152 species: Archae - 0; Bacteria - 68; Metazoa - 159;
Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes -
67 (source: NCBI BLink).
0.72 0.3 -0.32
13 AT3G49480 Protein with RNI-like/FBD-like domains -0.72 0.29 -0.32
14 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1
0.7 0.3 -0.32
15 AT4G39110 Malectin/receptor-like protein kinase family protein 0.7 0.32 -0.33
16 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.7 0.33 -0.32
17 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.7 0.31 -0.29
18 AT1G05950 unknown protein; Has 50 Blast hits to 45 proteins in 14
species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).
0.69 0.31 -0.35
19 AT3G53940 Mitochondrial substrate carrier family protein 0.69 0.29 -0.31
20 AT1G69100 Eukaryotic aspartyl protease family protein 0.69 0.32 -0.33
21 AT5G39640 Putative endonuclease or glycosyl hydrolase 0.69 0.33 -0.31
22 AT2G33610 switch subunit 3 switch subunit 3, CHROMATIN
REMODELING COMPLEX SUBUNIT B,
switch subunit 3
-0.69 0.29 -0.31
23 AT1G26300 BSD domain-containing protein -0.69 0.3 -0.3
24 AT4G27370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
MYOSIN VIII B, VIIIB 0.69 0.32 -0.32
25 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6
0.69 0.33 -0.31
26 AT3G30570 transposable element gene 0.69 0.3 -0.3
27 AT3G13820 F-box and associated interaction domains-containing protein 0.68 0.32 -0.31
28 AT1G52470 alpha/beta-Hydrolases superfamily protein -0.68 0.32 -0.31
29 AT4G17486 PPPDE putative thiol peptidase family protein -0.68 0.32 -0.31
30 AT2G30740 Protein kinase superfamily protein -0.68 0.31 -0.33
31 AT2G06120 transposable element gene 0.68 0.32 -0.32
32 AT1G18510 tetraspanin 16 tetraspanin 16 0.68 0.33 -0.33
33 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).
0.68 0.32 -0.31
34 AT2G13510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G13500.1); Has 136 Blast hits
to 116 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.68 0.3 -0.3
35 AT3G57900 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.68 0.31 -0.31
36 AT3G61940 Cation efflux family protein ATMTPA1, MTPA1 0.68 0.33 -0.29
37 AT2G34370 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.29
38 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein
ATPHOS32, PHOS32 -0.68 0.32 -0.31
39 AT3G42220 transposable element gene 0.68 0.32 -0.31
40 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM
-0.68 0.29 -0.31
41 AT5G51090 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.68 0.32 -0.3
42 AT4G29230 NAC domain containing protein 75 NAC domain containing protein 75,
NAC domain containing protein 75
-0.67 0.33 -0.3
43 AT1G31530 DNAse I-like superfamily protein 0.67 0.3 -0.32
44 AT5G41850 alpha/beta-Hydrolases superfamily protein 0.67 0.35 -0.31
45 AT4G37950 Rhamnogalacturonate lyase family protein 0.67 0.32 -0.31
46 AT3G42790 alfin-like 3 alfin-like 3 -0.67 0.31 -0.3
47 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5
0.67 0.3 -0.29
48 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 0.67 0.32 -0.34
49 AT5G18110 novel cap-binding protein novel cap-binding protein -0.67 0.33 -0.31
50 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 0.67 0.31 -0.31
51 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4
0.67 0.32 -0.31
52 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8
0.67 0.32 -0.3
53 AT1G80870 Protein kinase superfamily protein 0.67 0.35 -0.3
54 AT3G55770 GATA type zinc finger transcription factor family protein WLIM2b -0.67 0.32 -0.31
55 AT4G10820 F-box family protein 0.67 0.31 -0.32
56 AT3G31915 transposable element gene -0.67 0.31 -0.31
57 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E
0.66 0.31 -0.31
58 AT1G76660 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 353 Blast hits to 231 proteins in
60 species: Archae - 0; Bacteria - 6; Metazoa - 57; Fungi -
22; Plants - 125; Viruses - 4; Other Eukaryotes - 139
(source: NCBI BLink).
-0.66 0.3 -0.33
59 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase
0.66 0.31 -0.28
60 AT3G24515 ubiquitin-conjugating enzyme 37 ubiquitin-conjugating enzyme 37 0.66 0.3 -0.33
61 AT3G04970 DHHC-type zinc finger family protein -0.66 0.3 -0.32
62 AT2G30400 ovate family protein 2 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 2, ovate family protein 2
-0.66 0.33 -0.3
63 AT3G20800 Cell differentiation, Rcd1-like protein -0.66 0.32 -0.31
64 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A
-0.66 0.32 -0.32
65 AT2G10610 transposable element gene 0.66 0.33 -0.31
66 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4
-0.66 0.31 -0.3
67 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1
-0.66 0.31 -0.32
68 AT4G13790 SAUR-like auxin-responsive protein family -0.65 0.31 -0.33
69 AT5G52870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).
MEMBRANE-ASSOCIATED KINASE
REGULATOR 5
-0.65 0.32 -0.29
70 AT2G37800 Cysteine/Histidine-rich C1 domain family protein -0.65 0.3 -0.3
71 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.3 -0.32
72 AT4G17060 FRIGIDA interacting protein 2 FRIGIDA interacting protein 2 -0.65 0.31 -0.3
73 AT1G14400 ubiquitin carrier protein 1 ATUBC1, ubiquitin carrier protein
1, UBIQUITIN CONJUGATING ENZYME 1
-0.65 0.31 -0.3
74 AT5G44330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.32 -0.3
75 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10
0.65 0.32 -0.32
76 AT2G16010 transposable element gene -0.65 0.31 -0.32
77 AT5G22420 fatty acid reductase 7 fatty acid reductase 7 -0.65 0.31 -0.31
78 AT1G51950 indole-3-acetic acid inducible 18 indole-3-acetic acid inducible 18 -0.65 0.34 -0.32
79 AT3G60260 ELMO/CED-12 family protein -0.65 0.3 -0.31
80 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3
0.65 0.29 -0.3
81 AT3G44910 cation/H+ exchanger 12 ATCHX12, cation/H+ exchanger 12 0.65 0.31 -0.31
82 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23
-0.65 0.31 -0.32
83 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3
-0.65 0.29 -0.32
84 AT5G41610 cation/H+ exchanger 18 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 18, cation/H+ exchanger
18
-0.64 0.33 -0.33
85 AT2G07560 H(+)-ATPase 6 H(+)-ATPase 6, H(+)-ATPase 6 -0.64 0.33 -0.32
86 AT3G46750 unknown protein; Has 2631 Blast hits to 1984 proteins in
271 species: Archae - 6; Bacteria - 163; Metazoa - 1232;
Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes -
828 (source: NCBI BLink).
-0.64 0.31 -0.3
87 AT1G75760 ER lumen protein retaining receptor family protein 0.63 0.3 -0.34
88 AT5G04500 glycosyltransferase family protein 47 0.63 0.33 -0.31
89 AT1G24000 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
0.63 0.3 -0.34
90 AT4G20200 Terpenoid cyclases/Protein prenyltransferases superfamily
protein
0.63 0.33 -0.32
91 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein
-0.63 0.32 -0.33
92 AT5G02430 Transducin/WD40 repeat-like superfamily protein 0.63 0.32 -0.29
93 AT5G28620 protein kinase C-related -0.63 0.31 -0.3
94 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E
-0.63 0.32 -0.3
95 AT5G39380 Plant calmodulin-binding protein-related 0.63 0.3 -0.31
96 AT3G22990 ARM repeat superfamily protein LEAF AND FLOWER RELATED -0.63 0.33 -0.33
97 AT2G01710 Chaperone DnaJ-domain superfamily protein -0.63 0.34 -0.32
98 AT1G79640 Protein kinase superfamily protein 0.63 0.34 -0.32
99 AT4G18080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: stem; BEST Arabidopsis
thaliana protein match is: Protein of unknown function
(DUF1184) (TAIR:AT3G27900.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).
0.63 0.31 -0.32
100 AT4G21070 breast cancer susceptibility1 ARABIDOPSIS THALIANA BREAST CANCER
SUSCEPTIBILITY1, breast cancer
susceptibility1
0.63 0.31 -0.3
101 AT3G26125 cytochrome P450, family 86, subfamily C, polypeptide 2 cytochrome P450, family 86,
subfamily C, polypeptide 2
-0.63 0.33 -0.31
102 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT
-0.63 0.31 -0.33
103 AT5G23080 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein
TOUGH -0.63 0.33 -0.29
104 AT1G07680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23903.1); Has 7 Blast
hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.63 0.31 -0.32
105 AT3G48940 Remorin family protein 0.62 0.32 -0.33
106 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 -0.62 0.3 -0.31
107 AT3G13280 Putative endonuclease or glycosyl hydrolase 0.62 0.33 -0.32
108 AT1G02750 Drought-responsive family protein -0.62 0.29 -0.32
109 AT5G53190 Nodulin MtN3 family protein AtSWEET3, SWEET3 0.62 0.31 -0.3
110 AT4G03570 Cystatin/monellin superfamily protein 0.62 0.32 -0.33
111 AT1G57590 Pectinacetylesterase family protein 0.62 0.32 -0.32
112 AT3G59950 Peptidase family C54 protein -0.62 0.31 -0.33
113 AT5G39420 CDC2C CDC2C -0.62 0.3 -0.29
114 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7
-0.62 0.31 -0.33
115 AT2G27375 transposable element gene 0.62 0.33 -0.33
116 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).
-0.61 0.3 -0.31
117 AT5G27430 Signal peptidase subunit -0.61 0.31 -0.32
118 AT5G10950 Tudor/PWWP/MBT superfamily protein -0.61 0.3 -0.31
119 AT4G07380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.61 0.33 -0.33
120 AT3G28960 Transmembrane amino acid transporter family protein 0.61 0.28 -0.32
121 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.61 0.33 -0.32
122 AT1G15460 HCO3- transporter family ARABIDOPSIS THALIANA REQUIRES HIGH
BORON 4, REQUIRES HIGH BORON 4
0.61 0.32 -0.32
123 AT3G11730 Ras-related small GTP-binding family protein ATFP8, ARABIDOPSIS THALIANA RAB
GTPASE HOMOLOG D1, RAB GTPASE
HOMOLOG D1
-0.61 0.32 -0.32
124 AT3G52090 DNA-directed RNA polymerase, RBP11-like ATRPB13.6, NRPB11, NRPD11, NRPE11 -0.61 0.3 -0.31
125 AT5G07480 KAR-UP oxidoreductase 1 KAR-UP oxidoreductase 1 0.61 0.31 -0.31
126 AT1G70460 root hair specific 10 proline-rich extensin-like
receptor kinase 13, proline-rich
extensin-like receptor kinase 13,
root hair specific 10
-0.61 0.34 -0.32
127 AT5G35550 Duplicated homeodomain-like superfamily protein MYB DOMAIN PROTEIN 123, ATTT2, MYB
DOMAIN PROTEIN 123, TRANSPARENT
TESTA 2
-0.61 0.32 -0.34
128 AT5G50910 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.6 0.31 -0.31
129 AT1G18750 AGAMOUS-like 65 AGAMOUS-like 65 -0.6 0.3 -0.31
130 AT2G01410 NHL domain-containing protein -0.6 0.33 -0.3
131 AT3G57240 beta-1,3-glucanase 3 beta-1,3-glucanase 3 0.6 0.33 -0.33
132 AT4G09830 Uncharacterised conserved protein UCP009193 -0.6 0.34 -0.32
133 AT1G64410 transposable element gene 0.6 0.3 -0.32
134 AT5G07270 XB3 ortholog 3 in Arabidopsis thaliana XB3 ortholog 3 in Arabidopsis
thaliana
-0.6 0.32 -0.31
135 AT5G32490 transposable element gene 0.6 0.3 -0.32
136 AT1G28375 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
0.6 0.31 -0.31
137 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 0.6 0.31 -0.32
138 AT2G14835 RING/U-box superfamily protein -0.6 0.31 -0.31
139 AT5G64130 cAMP-regulated phosphoprotein 19-related protein -0.6 0.32 -0.33
140 AT4G25170 Uncharacterised conserved protein (UCP012943) -0.6 0.32 -0.29
141 AT4G27980 Domain of unknown function (DUF3444) 0.6 0.32 -0.32
142 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).
0.6 0.3 -0.3
143 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-
0.6 0.32 -0.33
144 AT5G66430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
-0.6 0.33 -0.3
145 AT3G10100 transposable element gene 0.6 0.31 -0.31
146 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.6 0.33 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
147 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II
-0.76 0.48 -0.47 C0228