AT5G10650 : -
Query Information
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AGICode AT5G10650
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G10650 RING/U-box superfamily protein 1 0.32 -0.33
2 AT3G03960 TCP-1/cpn60 chaperonin family protein -0.87 0.33 -0.33
3 AT5G56710 Ribosomal protein L31e family protein -0.86 0.31 -0.32
4 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 -0.86 0.29 -0.31
5 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein -0.85 0.32 -0.31
6 AT3G28900 Ribosomal protein L34e superfamily protein -0.85 0.32 -0.32
7 AT1G22930 T-complex protein 11 0.85 0.33 -0.32
8 AT5G53350 CLP protease regulatory subunit X CLP protease regulatory subunit X 0.84 0.32 -0.31
9 AT2G47600 magnesium/proton exchanger magnesium/proton exchanger,
ATMHX1, magnesium/proton
exchanger, MAGNESIUM/PROTON
EXCHANGER 1		 0.84 0.3 -0.31
10 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 -0.84 0.3 -0.33
11 AT4G32250 Protein kinase superfamily protein 0.83 0.33 -0.31
12 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 -0.83 0.33 -0.3
13 AT3G26380 Melibiase family protein 0.83 0.31 -0.33
14 AT3G51730 saposin B domain-containing protein 0.83 0.33 -0.3
15 AT4G03030 Galactose oxidase/kelch repeat superfamily protein 0.83 0.3 -0.3
16 AT1G07070 Ribosomal protein L35Ae family protein -0.83 0.34 -0.34
17 AT5G39520 Protein of unknown function (DUF1997) 0.83 0.32 -0.32
18 AT2G36620 ribosomal protein L24 ribosomal protein L24 -0.83 0.31 -0.3
19 AT1G20560 acyl activating enzyme 1 acyl activating enzyme 1 0.82 0.32 -0.31
20 AT3G06610 DNA-binding enhancer protein-related -0.82 0.32 -0.34
21 AT1G27400 Ribosomal protein L22p/L17e family protein -0.82 0.31 -0.3
22 AT4G17520 Hyaluronan / mRNA binding family -0.82 0.31 -0.31
23 AT3G56340 Ribosomal protein S26e family protein -0.82 0.32 -0.31
24 AT4G29410 Ribosomal L28e protein family -0.82 0.31 -0.31
25 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 -0.82 0.3 -0.31
26 AT2G20450 Ribosomal protein L14 -0.82 0.31 -0.33
27 AT3G61960 Protein kinase superfamily protein 0.82 0.32 -0.33
28 AT3G58100 plasmodesmata callose-binding protein 5 plasmodesmata callose-binding
protein 5		 -0.82 0.3 -0.32
29 AT1G04680 Pectin lyase-like superfamily protein -0.81 0.31 -0.31
30 AT1G20950 Phosphofructokinase family protein -0.81 0.32 -0.32
31 AT3G04840 Ribosomal protein S3Ae -0.81 0.3 -0.3
32 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.31 -0.32
33 AT1G08230 Transmembrane amino acid transporter family protein ATGAT1, L-GAMMA-AMINOBUTYRIC ACID
TRANSPORTER 1		 0.81 0.32 -0.32
34 AT1G02470 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.81 0.33 -0.33
35 AT1G05940 cationic amino acid transporter 9 cationic amino acid transporter 9 0.81 0.32 -0.34
36 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e -0.81 0.3 -0.31
37 AT1G73230 Nascent polypeptide-associated complex NAC -0.81 0.29 -0.31
38 AT3G10610 Ribosomal S17 family protein -0.81 0.31 -0.34
39 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 -0.81 0.32 -0.31
40 AT3G07110 Ribosomal protein L13 family protein -0.81 0.33 -0.3
41 AT3G06680 Ribosomal L29e protein family -0.81 0.32 -0.29
42 AT5G61170 Ribosomal protein S19e family protein -0.81 0.32 -0.31
43 AT5G17860 calcium exchanger 7 calcium exchanger 7 0.81 0.3 -0.3
44 AT3G16780 Ribosomal protein L19e family protein -0.81 0.31 -0.31
45 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 -0.81 0.3 -0.32
46 AT3G56620 nodulin MtN21 /EamA-like transporter family protein 0.81 0.33 -0.32
47 AT1G21410 F-box/RNI-like superfamily protein SKP2A 0.8 0.32 -0.3
48 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 0.8 0.32 -0.32
49 AT5G15520 Ribosomal protein S19e family protein -0.8 0.3 -0.31
50 AT3G11250 Ribosomal protein L10 family protein -0.8 0.3 -0.3
51 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.8 0.31 -0.3
52 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase 0.8 0.3 -0.3
53 AT1G19950 HVA22-like protein H (ATHVA22H) HVA22-like protein H (ATHVA22H) -0.8 0.33 -0.32
54 AT2G18480 Major facilitator superfamily protein 0.8 0.32 -0.32
55 AT4G14320 Zinc-binding ribosomal protein family protein -0.8 0.3 -0.32
56 AT1G29250 Alba DNA/RNA-binding protein -0.8 0.32 -0.3
57 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b 0.8 0.31 -0.35
58 AT3G22550 Protein of unknown function (DUF581) 0.8 0.32 -0.33
59 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 -0.8 0.32 -0.32
60 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 -0.8 0.3 -0.3
61 AT3G48690 alpha/beta-Hydrolases superfamily protein ARABIDOPSIS THALIANA
CARBOXYESTERASE 12, CXE12		 0.8 0.33 -0.31
62 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 -0.8 0.31 -0.31
63 AT4G10450 Ribosomal protein L6 family -0.8 0.33 -0.32
64 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.79 0.31 -0.31
65 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).		 0.79 0.32 -0.3
66 AT3G58610 ketol-acid reductoisomerase -0.79 0.33 -0.3
67 AT2G31725 Eukaryotic protein of unknown function (DUF842) -0.79 0.28 -0.31
68 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.79 0.33 -0.31
69 AT4G34555 Ribosomal protein S25 family protein -0.79 0.3 -0.3
70 AT3G11510 Ribosomal protein S11 family protein -0.79 0.33 -0.31
71 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 -0.79 0.32 -0.31
72 AT1G42470 Patched family protein 0.79 0.34 -0.32
73 AT2G01250 Ribosomal protein L30/L7 family protein -0.79 0.32 -0.32
74 AT5G64140 ribosomal protein S28 ribosomal protein S28 -0.79 0.33 -0.31
75 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 -0.79 0.32 -0.33
76 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM 0.79 0.33 -0.33
77 AT4G29720 polyamine oxidase 5 polyamine oxidase 5, polyamine
oxidase 5		 -0.79 0.34 -0.32
78 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta -0.79 0.32 -0.31
79 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 -0.79 0.31 -0.31
80 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.79 0.31 -0.31
81 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.79 0.31 -0.31
82 AT3G11660 NDR1/HIN1-like 1 NDR1/HIN1-like 1 0.79 0.31 -0.32
83 AT4G37310 cytochrome P450, family 81, subfamily H, polypeptide 1 cytochrome P450, family 81,
subfamily H, polypeptide 1		 0.78 0.32 -0.3
84 AT1G21000 PLATZ transcription factor family protein 0.78 0.31 -0.3
85 AT5G60990 DEA(D/H)-box RNA helicase family protein -0.78 0.33 -0.32
86 AT3G25520 ribosomal protein L5 ribosomal protein L5, OLIGOCELLULA
5, PIGGYBACK3, RIBOSOMAL PROTEIN
L5 A		 -0.78 0.33 -0.32
87 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 0.78 0.33 -0.28
88 AT4G17390 Ribosomal protein L23/L15e family protein -0.78 0.29 -0.32
89 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein 0.78 0.31 -0.29
90 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 0.78 0.3 -0.29
91 AT3G02530 TCP-1/cpn60 chaperonin family protein -0.78 0.32 -0.31
92 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.78 0.32 -0.31
93 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 0.78 0.31 -0.32
94 AT2G21540 SEC14-like 3 SEC14-LIKE 3, SEC14-like 3 -0.78 0.32 -0.32
95 AT5G24330 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 6, SET DOMAIN PROTEIN 34		 -0.78 0.31 -0.33
96 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A -0.78 0.3 -0.33
97 AT3G52580 Ribosomal protein S11 family protein -0.78 0.32 -0.33
98 AT3G60770 Ribosomal protein S13/S15 -0.78 0.31 -0.3
99 AT1G21690 ATPase family associated with various cellular activities
(AAA) 		embryo defective 1968, replication
factor C 4		 -0.78 0.3 -0.31
100 AT3G26100 Regulator of chromosome condensation (RCC1) family protein 0.78 0.33 -0.31
101 AT1G48630 receptor for activated C kinase 1B receptor for activated C kinase
1B, receptor for activated C
kinase 1B		 -0.78 0.3 -0.3
102 AT5G09510 Ribosomal protein S19 family protein -0.77 0.35 -0.3
103 AT5G64770 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 9 -0.77 0.32 -0.32
104 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase 0.77 0.32 -0.34
105 AT3G57000 nucleolar essential protein-related -0.77 0.31 -0.31
106 AT1G71260 WHIRLY 2 WHIRLY 2, WHIRLY 2 -0.77 0.31 -0.35
107 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 -0.77 0.31 -0.31
108 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 -0.77 0.32 -0.31
109 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.77 0.32 -0.3
110 AT3G26000 Ribonuclease inhibitor 0.77 0.31 -0.31
111 AT2G38810 histone H2A 8 histone H2A 8 -0.77 0.35 -0.31
112 AT3G58700 Ribosomal L5P family protein -0.77 0.31 -0.33
113 AT3G23390 Zinc-binding ribosomal protein family protein -0.77 0.32 -0.32
114 AT2G36230 Aldolase-type TIM barrel family protein ALBINO AND PALE GREEN 10, HISN3 -0.77 0.35 -0.3
115 AT2G37190 Ribosomal protein L11 family protein -0.77 0.31 -0.33
116 AT2G19730 Ribosomal L28e protein family -0.77 0.3 -0.32
117 AT2G37150 RING/U-box superfamily protein 0.77 0.34 -0.32
118 AT1G03080 kinase interacting (KIP1-like) family protein 0.77 0.3 -0.32
119 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 -0.77 0.31 -0.31
120 AT4G25740 RNA binding Plectin/S10 domain-containing protein -0.77 0.31 -0.32
121 AT1G28395 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast
hits to 89 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.31 -0.3
122 AT1G21880 lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1
precursor		 -0.76 0.32 -0.31
123 AT3G42660 transducin family protein / WD-40 repeat family protein -0.76 0.31 -0.31
124 AT3G12710 DNA glycosylase superfamily protein -0.76 0.31 -0.32
125 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family
protein		 -0.76 0.34 -0.32
126 AT5G58420 Ribosomal protein S4 (RPS4A) family protein -0.76 0.32 -0.29
127 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 -0.76 0.3 -0.32
128 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 -0.76 0.31 -0.33
129 AT2G42890 MEI2-like 2 MEI2-like 2, MEI2-like 2 0.76 0.3 -0.3
130 AT3G50650 GRAS family transcription factor 0.76 0.32 -0.33
131 AT5G16130 Ribosomal protein S7e family protein -0.76 0.32 -0.33
132 AT3G62120 Class II aaRS and biotin synthetases superfamily protein -0.76 0.3 -0.32
133 AT5G35370 S-locus lectin protein kinase family protein 0.76 0.31 -0.34
134 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 0.76 0.32 -0.31
135 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.76 0.33 -0.3
136 AT3G16080 Zinc-binding ribosomal protein family protein -0.76 0.33 -0.32
137 AT3G47960 Major facilitator superfamily protein 0.76 0.32 -0.31
138 AT3G02080 Ribosomal protein S19e family protein -0.76 0.3 -0.32
139 AT1G03110 Transducin/WD40 repeat-like superfamily protein AtTRM82, tRNA modification 82 -0.76 0.32 -0.3
140 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.76 0.33 -0.33
141 AT5G64330 Phototropic-responsive NPH3 family protein JK218, NON-PHOTOTROPIC HYPOCOTYL
3, ROOT PHOTOTROPISM 3		 -0.76 0.31 -0.32
142 AT3G20240 Mitochondrial substrate carrier family protein -0.76 0.33 -0.31
143 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 -0.76 0.32 -0.31
144 AT3G53380 Concanavalin A-like lectin protein kinase family protein -0.76 0.32 -0.32
145 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B -0.76 0.3 -0.32
146 AT2G36950 Heavy metal transport/detoxification superfamily protein 0.76 0.32 -0.3
147 AT2G44130 Galactose oxidase/kelch repeat superfamily protein 0.76 0.33 -0.32
148 AT3G53960 Major facilitator superfamily protein 0.75 0.33 -0.3
149 AT1G74410 RING/U-box superfamily protein 0.75 0.3 -0.34
150 AT3G12520 sulfate transporter 4;2 sulfate transporter 4;2 0.75 0.33 -0.29
151 AT3G57520 seed imbibition 2 seed imbibition 2, raffinose
synthase 2, seed imbibition 2		 0.75 0.31 -0.3
152 AT1G73980 Phosphoribulokinase / Uridine kinase family 0.75 0.34 -0.33
153 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.75 0.3 -0.34
154 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 0.75 0.31 -0.31
155 AT1G80160 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 7 0.75 0.32 -0.33
156 AT2G32830 phosphate transporter 1;5 phosphate transporter 1;5,
PHOSPHATE TRANSPORTER 5		 0.75 0.31 -0.3
157 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 0.74 0.32 -0.31
158 AT3G25010 receptor like protein 41 receptor like protein 41, receptor
like protein 41		 0.74 0.32 -0.3
159 AT3G60140 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 30, DARK
INDUCIBLE 2, SENESCENCE-RELATED
GENE 2		 0.74 0.33 -0.32
160 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 0.74 0.33 -0.32
161 AT4G12580 unknown protein; Has 24 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 15 (source:
NCBI BLink).		 0.74 0.31 -0.32
162 AT3G24740 Protein of unknown function (DUF1644) 0.74 0.33 -0.3
163 AT2G25950 Protein of unknown function (DUF1000) 0.74 0.32 -0.32
164 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 0.74 0.31 -0.32
165 AT2G38050 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATDET2, DE-ETIOLATED 2, DWARF 6 0.74 0.31 -0.29
166 AT4G10050 esterase/lipase/thioesterase family protein 0.74 0.3 -0.33
167 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 0.74 0.32 -0.32
168 AT4G36210 Protein of unknown function (DUF726) 0.74 0.3 -0.33