AT5G19350 : -
Query Information
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AGICode AT5G19350
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.31 -0.3
2 AT5G22840 Protein kinase superfamily protein 0.84 0.33 -0.33
3 AT4G28450 nucleotide binding;protein binding 0.82 0.32 -0.32
4 AT1G61640 Protein kinase superfamily protein 0.82 0.32 -0.32
5 AT4G38890 FMN-linked oxidoreductases superfamily protein 0.82 0.33 -0.29
6 AT4G23540 ARM repeat superfamily protein 0.81 0.31 -0.32
7 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.8 0.3 -0.32
8 AT3G19630 Radical SAM superfamily protein 0.8 0.31 -0.31
9 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 0.8 0.33 -0.32
10 AT1G31020 thioredoxin O2 thioredoxin O2, thioredoxin O2 0.8 0.29 -0.32
11 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A 0.8 0.3 -0.31
12 AT3G12130 KH domain-containing protein / zinc finger (CCCH type)
family protein		 0.8 0.33 -0.32
13 AT4G38150 Pentatricopeptide repeat (PPR) superfamily protein 0.8 0.34 -0.32
14 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.79 0.32 -0.31
15 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.79 0.33 -0.32
16 AT1G69250 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.79 0.32 -0.33
17 AT2G44510 CDK inhibitor P21 binding protein 0.78 0.31 -0.31
18 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 0.78 0.3 -0.3
19 AT5G12220 las1-like family protein 0.77 0.32 -0.33
20 AT2G25590 Plant Tudor-like protein -0.77 0.32 -0.3
21 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 0.77 0.31 -0.32
22 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1		 0.77 0.33 -0.3
23 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 0.76 0.32 -0.34
24 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.76 0.33 -0.3
25 AT1G33230 TMPIT-like protein 0.76 0.34 -0.33
26 AT1G30580 GTP binding 0.76 0.31 -0.33
27 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 -0.76 0.31 -0.32
28 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 0.76 0.32 -0.3
29 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.31 -0.33
30 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 0.75 0.31 -0.3
31 AT1G22730 MA3 domain-containing protein 0.75 0.34 -0.31
32 AT5G58130 RNA-binding (RRM/RBD/RNP motifs) family protein REPRESSOR OF SILENCING 3 0.75 0.33 -0.3
33 AT3G26782 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.31 -0.29
34 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.75 0.29 -0.33
35 AT5G15640 Mitochondrial substrate carrier family protein 0.75 0.31 -0.3
36 AT5G50315 transposable element gene 0.75 0.33 -0.31
37 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.75 0.33 -0.3
38 AT5G54580 RNA-binding (RRM/RBD/RNP motifs) family protein 0.75 0.33 -0.32
39 AT5G59980 Polymerase/histidinol phosphatase-like 0.75 0.32 -0.32
40 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
biogenesis		 0.75 0.34 -0.31
41 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 0.75 0.32 -0.32
42 AT4G30993 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.74 0.32 -0.32
43 AT3G15000 cobalt ion binding 0.74 0.3 -0.32
44 AT1G04945 HIT-type Zinc finger family protein 0.74 0.31 -0.3
45 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 -0.74 0.3 -0.32
46 AT5G18420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2363
(InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.73 0.31 -0.31
47 AT5G16930 AAA-type ATPase family protein 0.73 0.3 -0.33
48 AT2G41630 transcription factor IIB transcription factor IIB 0.73 0.32 -0.3
49 AT1G62730 Terpenoid synthases superfamily protein 0.73 0.31 -0.33
50 AT3G63400 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.73 0.3 -0.31
51 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.73 0.32 -0.31
52 AT1G80720 Mitochondrial glycoprotein family protein 0.73 0.31 -0.33
53 AT1G55150 DEA(D/H)-box RNA helicase family protein 0.73 0.32 -0.31
54 AT3G07590 Small nuclear ribonucleoprotein family protein 0.73 0.29 -0.33
55 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.73 0.3 -0.3
56 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.72 0.32 -0.31
57 AT2G44020 Mitochondrial transcription termination factor family
protein		 0.72 0.33 -0.32
58 AT1G02460 Pectin lyase-like superfamily protein 0.72 0.33 -0.33
59 AT1G51600 ZIM-LIKE 2 GATA TRANSCRIPTION FACTOR 28,
TIFY2A, ZIM-LIKE 2		 0.72 0.3 -0.3
60 AT3G44110 DNAJ homologue 3 ATJ, DNAJ homologue 3, J3 0.72 0.32 -0.34
61 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 0.72 0.32 -0.33
62 AT2G24500 Zinc finger protein 622 FZF 0.72 0.32 -0.29
63 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.32 -0.3
64 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein -0.71 0.31 -0.29
65 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.71 0.3 -0.33
66 AT5G22460 alpha/beta-Hydrolases superfamily protein -0.7 0.32 -0.32
67 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.32 -0.32
68 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.7 0.29 -0.33
69 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.69 0.31 -0.32
70 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.69 0.31 -0.32
71 AT5G11350 DNAse I-like superfamily protein -0.68 0.32 -0.32
72 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.67 0.32 -0.31
73 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 -0.66 0.3 -0.31
74 AT3G09410 Pectinacetylesterase family protein -0.66 0.29 -0.33
75 AT2G06005 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 -0.65 0.29 -0.3
76 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 -0.65 0.31 -0.31
77 AT5G47720 Thiolase family protein -0.65 0.32 -0.3
78 AT3G13672 TRAF-like superfamily protein -0.65 0.33 -0.31
79 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.64 0.31 -0.33
80 AT5G44310 Late embryogenesis abundant protein (LEA) family protein -0.64 0.3 -0.31
81 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.31 -0.33
82 AT1G16730 unknown protein 6 unknown protein 6 -0.64 0.31 -0.32
83 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.63 0.31 -0.32
84 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.62 0.31 -0.32
85 AT1G74300 alpha/beta-Hydrolases superfamily protein -0.62 0.32 -0.31
86 AT5G63800 Glycosyl hydrolase family 35 protein beta-galactosidase 6,
MUCILAGE-MODIFIED 2		 -0.61 0.31 -0.31
87 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.61 0.32 -0.31
88 AT5G07080 HXXXD-type acyl-transferase family protein -0.61 0.34 -0.3
89 AT3G23010 receptor like protein 36 receptor like protein 36, receptor
like protein 36		 -0.61 0.31 -0.33
90 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.61 0.32 -0.31
91 AT3G49060 U-box domain-containing protein kinase family protein -0.6 0.31 -0.32
92 AT2G02780 Leucine-rich repeat protein kinase family protein -0.59 0.31 -0.33
93 AT2G01680 Ankyrin repeat family protein -0.59 0.35 -0.32
94 AT1G68530 3-ketoacyl-CoA synthase 6 ECERIFERUM 6, CUTICULAR 1, G2,
3-ketoacyl-CoA synthase 6,
POLLEN-PISTIL INCOMPATIBILITY 1		 -0.59 0.31 -0.35
95 AT2G26170 cytochrome P450, family 711, subfamily A, polypeptide 1 cytochrome P450, family 711,
subfamily A, polypeptide 1, MORE
AXILLARY BRANCHES 1		 -0.58 0.33 -0.31
96 AT3G16990 Haem oxygenase-like, multi-helical -0.58 0.31 -0.29