AT5G20420 : chromatin remodeling 42
Query Information
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AGICode AT5G20420
Description chromatin remodeling 42
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G20420 chromatin remodeling 42 chromatin remodeling 42 1 0.33 -0.29
2 AT3G19640 magnesium transporter 4 magnesium transporter 4, MRS2-3 -0.77 0.31 -0.31
3 AT3G56160 Sodium Bile acid symporter family 0.76 0.31 -0.31
4 AT2G39560 Putative membrane lipoprotein 0.75 0.32 -0.33
5 AT4G17260 Lactate/malate dehydrogenase family protein -0.75 0.33 -0.3
6 AT5G25540 CTC-interacting domain 6 CTC-interacting domain 6 -0.74 0.34 -0.3
7 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 -0.74 0.33 -0.31
8 AT4G21450 PapD-like superfamily protein -0.74 0.32 -0.31
9 AT1G54720 early-responsive to dehydration protein-related / ERD
protein-related		 0.73 0.3 -0.31
10 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.73 0.32 -0.32
11 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.73 0.31 -0.3
12 AT1G20696 high mobility group B3 high mobility group B3, NFD03,
NFD3		 -0.73 0.32 -0.3
13 AT3G55140 Pectin lyase-like superfamily protein -0.73 0.31 -0.31
14 AT2G30400 ovate family protein 2 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 2, ovate family protein 2		 -0.72 0.29 -0.34
15 AT3G17020 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.72 0.33 -0.31
16 AT2G45200 golgi snare 12 ATGOS12, golgi snare 12 -0.71 0.33 -0.32
17 AT2G29070 Ubiquitin fusion degradation UFD1 family protein -0.71 0.32 -0.31
18 AT3G46460 ubiquitin-conjugating enzyme 13 ubiquitin-conjugating enzyme 13 -0.71 0.31 -0.32
19 AT2G01310 BEST Arabidopsis thaliana protein match is:
cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.1); Has
37 Blast hits to 37 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.31 -0.33
20 AT2G39760 BTB/POZ/MATH-domains containing protein ATBPM3, BPM3 -0.71 0.3 -0.33
21 AT1G76920 F-box family protein -0.71 0.31 -0.31
22 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 -0.71 0.33 -0.29
23 AT5G10950 Tudor/PWWP/MBT superfamily protein -0.7 0.32 -0.32
24 AT4G39090 Papain family cysteine protease RESPONSIVE TO DEHYDRATION 19,
RESPONSIVE TO DEHYDRATION 19A		 -0.7 0.3 -0.31
25 AT2G29820 Galactose oxidase/kelch repeat superfamily protein 0.7 0.32 -0.33
26 AT3G46130 myb domain protein 48 myb domain protein 48, ATMYB48-1,
ATMYB48-2, ATMYB48-3, myb domain
protein 48		 0.7 0.31 -0.33
27 AT3G60260 ELMO/CED-12 family protein -0.7 0.32 -0.3
28 AT1G66410 calmodulin 4 CALMODULIN 4, calmodulin 4 -0.7 0.32 -0.32
29 AT2G07000 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.7 0.32 -0.31
30 AT1G18610 Galactose oxidase/kelch repeat superfamily protein 0.7 0.32 -0.31
31 AT2G23970 Class I glutamine amidotransferase-like superfamily protein -0.7 0.31 -0.32
32 AT1G05950 unknown protein; Has 50 Blast hits to 45 proteins in 14
species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.69 0.32 -0.32
33 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.69 0.31 -0.3
34 AT5G06140 sorting nexin 1 ARABIDOPSIS THALIANA SORTING NEXIN
1, sorting nexin 1		 -0.69 0.32 -0.33
35 AT2G23080 Protein kinase superfamily protein casein kinase II, alpha chain 3 -0.69 0.3 -0.3
36 AT2G24360 Protein kinase superfamily protein -0.69 0.34 -0.33
37 AT5G52240 membrane steroid binding protein 1 ARABIDOPSIS THALIANA
MEMBRANE-ASSOCIATED PROGESTERONE
BINDING PROTEIN 5, ATMP1, membrane
steroid binding protein 1		 -0.68 0.31 -0.33
38 AT4G17670 Protein of unknown function (DUF581) -0.68 0.3 -0.29
39 AT4G11220 VIRB2-interacting protein 2 VIRB2-interacting protein 2,
Reticulan like protein B2		 -0.68 0.31 -0.31
40 AT3G60250 casein kinase II beta chain 3 casein kinase II beta chain 3 -0.68 0.31 -0.32
41 AT1G68090 annexin 5 annexin 5, ANNEXIN ARABIDOPSIS
THALIANA 5		 0.68 0.33 -0.3
42 AT4G32450 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.32
43 AT2G15270 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1168 (InterPro:IPR009548); Has 1930
Blast hits to 1364 proteins in 219 species: Archae - 0;
Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96;
Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).		 -0.68 0.29 -0.3
44 AT3G56610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sperm cell,
sepal, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C
globular stage; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF784, Arabidopsis thaliana
(InterPro:IPR008502); Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.32 -0.31
45 AT5G58640 Selenoprotein, Rdx type -0.68 0.32 -0.32
46 AT5G06830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF773 (InterPro:IPR008491); Has 365 Blast
hits to 359 proteins in 109 species: Archae - 9; Bacteria -
13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0;
Other Eukaryotes - 80 (source: NCBI BLink).		 -0.68 0.29 -0.32
47 AT2G11090 transposable element gene 0.68 0.33 -0.3
48 AT2G33030 receptor like protein 25 receptor like protein 25, receptor
like protein 25		 -0.68 0.31 -0.32
49 AT3G47510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.67 0.29 -0.29
50 AT3G13050 Major facilitator superfamily protein AtNiaP, nicotinate transporter -0.67 0.32 -0.31
51 AT2G11650 transposable element gene 0.67 0.33 -0.31
52 AT3G54850 plant U-box 14 ATPUB14, plant U-box 14 -0.67 0.33 -0.33
53 AT3G49050 alpha/beta-Hydrolases superfamily protein 0.67 0.32 -0.32
54 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A		 -0.67 0.32 -0.34
55 AT1G59710 Protein of unknown function (DUF569) -0.67 0.32 -0.3
56 AT1G47350 F-box associated ubiquitination effector family protein -0.67 0.32 -0.3
57 AT1G05720 selenoprotein family protein -0.67 0.3 -0.32
58 AT3G42070 transposable element gene 0.67 0.32 -0.32
59 AT1G09920 TRAF-type zinc finger-related -0.67 0.3 -0.3
60 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 -0.67 0.3 -0.31
61 AT1G56160 myb domain protein 72 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 72, myb domain protein 72		 -0.67 0.31 -0.29
62 AT4G14670 casein lytic proteinase B2 casein lytic proteinase B2 0.66 0.31 -0.29
63 AT4G02080 secretion-associated RAS super family 2 ASAR1, secretion-associated RAS
super family 2, ATSARA1C,
secretion-associated RAS super
family 2		 -0.66 0.31 -0.32
64 AT5G13160 Protein kinase superfamily protein avrPphB susceptible 1 -0.66 0.31 -0.3
65 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1		 0.66 0.32 -0.29
66 AT5G55370 MBOAT (membrane bound O-acyl transferase) family protein 0.66 0.31 -0.31
67 AT5G64180 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.31 -0.32
68 AT1G63300 Myosin heavy chain-related protein 0.66 0.33 -0.31
69 AT2G11120 transposable element gene 0.66 0.3 -0.33
70 AT1G64740 alpha-1 tubulin alpha-1 tubulin -0.66 0.3 -0.31
71 AT5G57320 villin, putative villin 5 0.66 0.32 -0.32
72 AT4G27370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MYOSIN VIII B, VIIIB 0.66 0.3 -0.34
73 AT5G30520 unknown protein; Has 50 Blast hits to 50 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.3 -0.31
74 AT1G01230 ORMDL family protein -0.65 0.31 -0.32
75 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 -0.65 0.31 -0.33
76 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 0.65 0.32 -0.32
77 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.65 0.29 -0.32
78 AT5G22360 vesicle-associated membrane protein 714 vesicle-associated membrane
protein 714, VAMP714,
vesicle-associated membrane
protein 714		 -0.65 0.32 -0.32
79 AT2G40680 transposable element gene 0.65 0.31 -0.3
80 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.65 0.32 -0.3
81 AT5G15170 tyrosyl-DNA phosphodiesterase-related tyrosyl-DNA phosphodiesterase 1 0.65 0.31 -0.31
82 AT1G23610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.65 0.32 -0.3
83 AT4G31170 Protein kinase superfamily protein -0.65 0.32 -0.32
84 AT5G53170 FTSH protease 11 FTSH protease 11 0.65 0.32 -0.31
85 AT5G58070 temperature-induced lipocalin TEMPERATURE-INDUCED LIPOCALIN,
temperature-induced lipocalin		 -0.65 0.3 -0.31
86 AT2G45100 Cyclin/Brf1-like TBP-binding protein 0.65 0.29 -0.33
87 AT3G55830 Nucleotide-diphospho-sugar transferases superfamily protein ECTOPICALLY PARTING CELLS -0.64 0.31 -0.31
88 AT1G07420 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol
4-alpha-methyl oxidase 1, sterol
4-alpha-methyl-oxidase 2-1		 -0.64 0.32 -0.33
89 AT3G17360 phragmoplast orienting kinesin 1 phragmoplast orienting kinesin 1 0.64 0.31 -0.31
90 AT3G47120 RNA recognition motif (RRM)-containing protein -0.64 0.31 -0.31
91 AT4G15730 CW-type Zinc Finger 0.64 0.31 -0.32
92 AT5G62910 RING/U-box superfamily protein -0.64 0.32 -0.32
93 AT1G17160 pfkB-like carbohydrate kinase family protein -0.64 0.32 -0.31
94 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 -0.64 0.29 -0.32
95 AT3G56820 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.64 0.32 -0.32
96 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.64 0.34 -0.29
97 AT3G28490 Oxoglutarate/iron-dependent oxygenase -0.64 0.31 -0.3
98 AT3G10590 Duplicated homeodomain-like superfamily protein -0.64 0.31 -0.32
99 AT1G15290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.33 -0.3
100 AT3G24680 transposable element gene 0.64 0.31 -0.31
101 AT5G47100 calcineurin B-like protein 9 ATCBL9, calcineurin B-like protein
9		 0.64 0.33 -0.32
102 AT5G62460 RING/FYVE/PHD zinc finger superfamily protein -0.64 0.29 -0.33
103 AT5G61210 soluble N-ethylmaleimide-sensitive factor adaptor protein
33		 ATSNAP33, ATSNAP33B, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 33, SNP33		 -0.64 0.32 -0.32
104 AT2G47970 Nuclear pore localisation protein NPL4 -0.64 0.32 -0.31
105 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein -0.64 0.3 -0.35
106 AT1G80780 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.64 0.3 -0.3
107 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 -0.64 0.32 -0.31
108 AT3G20340 Expression of the gene is downregulated in the presence of
paraquat, an inducer of photoxidative stress.		 -0.63 0.3 -0.3
109 AT4G27250 NAD(P)-binding Rossmann-fold superfamily protein 0.63 0.32 -0.29
110 AT1G14000 VH1-interacting kinase VH1-interacting kinase -0.63 0.31 -0.3
111 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 -0.63 0.33 -0.31
112 AT2G23270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, sperm cell, root,
stamen; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G37290.1); Has 36 Blast hits to 35 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.3
113 AT5G63640 ENTH/VHS/GAT family protein -0.63 0.32 -0.3
114 AT4G10790 UBX domain-containing protein -0.63 0.34 -0.32
115 AT2G14040 transposable element gene 0.63 0.3 -0.31
116 AT5G55300 DNA topoisomerase I alpha MGOUN 1, TOPOISOMERASE 1, DNA
topoisomerase I alpha		 0.63 0.32 -0.31
117 AT4G12230 alpha/beta-Hydrolases superfamily protein -0.63 0.3 -0.3
118 AT1G19120 Small nuclear ribonucleoprotein family protein -0.63 0.33 -0.29
119 AT3G29770 methyl esterase 11 ARABIDOPSIS THALIANA METHYL
ESTERASE 11, methyl esterase 11		 0.63 0.33 -0.31
120 AT5G39510 Vesicle transport v-SNARE family protein VESICLE TRANSPORT V-SNARE 11,
ATVTI1A, SHOOT GRAVITROPSIM 4,
VESICLE TRANSPORT V-SNARE 11,
VTI1A, ZIG, ZIG1		 -0.63 0.32 -0.3
121 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 -0.63 0.32 -0.3
122 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.63 0.32 -0.33
123 AT1G71697 choline kinase 1 choline kinase 1, CHOLINE KINASE,
choline kinase 1		 -0.63 0.31 -0.32
124 AT3G17310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AtDRM3, domains rearranged
methyltransferase 3		 0.62 0.32 -0.31
125 AT4G19910 Toll-Interleukin-Resistance (TIR) domain family protein 0.62 0.31 -0.32
126 AT4G24710 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.62 0.32 -0.31
127 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 0.62 0.29 -0.31
128 AT1G66550 WRKY DNA-binding protein 67 ATWRKY67, WRKY DNA-binding protein
67		 0.62 0.33 -0.32
129 AT1G78840 F-box/RNI-like/FBD-like domains-containing protein 0.62 0.33 -0.3
130 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.62 0.31 -0.28
131 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.61 0.3 -0.31
132 AT3G11980 Jojoba acyl CoA reductase-related male sterility protein FATTY ACID REDUCTASE 2, MALE
STERILITY 2		 0.61 0.34 -0.29
133 AT4G02660 Beige/BEACH domain ;WD domain, G-beta repeat protein 0.61 0.3 -0.3
134 AT1G49190 response regulator 19 response regulator 19, response
regulator 19		 0.61 0.31 -0.31
135 AT5G35150 transposable element gene 0.61 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
136 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.68 0.44 -0.43 C0131