AT5G28700 : -
Query Information
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AGICode AT5G28700
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G28700 transposable element gene 1 0.31 -0.32
2 AT5G27190 transposable element gene 0.76 0.32 -0.31
3 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.74 0.32 -0.31
4 AT4G39100 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 short life -0.73 0.31 -0.33
5 AT4G27980 Domain of unknown function (DUF3444) 0.72 0.32 -0.3
6 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.33 -0.32
7 AT4G15470 Bax inhibitor-1 family protein -0.71 0.3 -0.31
8 AT2G46080 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF793)
(TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in
20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi -
0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.33 -0.32
9 AT1G18340 basal transcription factor complex subunit-related 0.71 0.31 -0.29
10 AT2G05630 Ubiquitin-like superfamily protein ATG8D -0.71 0.3 -0.3
11 AT5G60140 AP2/B3-like transcriptional factor family protein 0.71 0.32 -0.31
12 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.33 -0.31
13 AT3G53940 Mitochondrial substrate carrier family protein 0.7 0.31 -0.32
14 AT5G11570 Major facilitator superfamily protein 0.7 0.33 -0.33
15 AT1G39430 transposable element gene 0.7 0.31 -0.3
16 AT2G05000 transposable element gene 0.69 0.32 -0.32
17 AT2G45080 cyclin p3;1 cyclin p3;1 0.69 0.31 -0.3
18 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 -0.69 0.33 -0.32
19 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 0.69 0.3 -0.32
20 AT2G33220 GRIM-19 protein -0.69 0.31 -0.32
21 AT3G51990 Protein kinase superfamily protein -0.69 0.33 -0.3
22 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.68 0.33 -0.32
23 AT4G10330 glycine-rich protein -0.68 0.31 -0.31
24 AT5G14980 alpha/beta-Hydrolases superfamily protein 0.68 0.3 -0.33
25 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein -0.67 0.31 -0.32
26 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.67 0.29 -0.3
27 AT2G36440 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.31 -0.31
28 AT5G58150 Leucine-rich repeat protein kinase family protein 0.67 0.32 -0.31
29 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 0.67 0.31 -0.33
30 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 -0.67 0.31 -0.32
31 AT3G55140 Pectin lyase-like superfamily protein -0.67 0.32 -0.31
32 AT1G20750 RAD3-like DNA-binding helicase protein -0.67 0.32 -0.32
33 AT5G51060 NADPH/respiratory burst oxidase protein D A. THALIANA RESPIRATORY BURST
OXIDASE HOMOLOG C, RESPIRATORY
BURST OXIDASE HOMOLOG C, ROOT HAIR
DEFECTIVE 2		 -0.66 0.3 -0.32
34 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D -0.66 0.31 -0.33
35 AT2G30920 coenzyme Q 3 coenzyme Q 3, COQ3, coenzyme Q 3,
embryo defective 3002		 -0.66 0.3 -0.31
36 AT5G66160 receptor homology region transmembrane domain ring H2 motif
protein 1		 ARABIDOPSIS THALIANA RECEPTOR
HOMOLOGY REGION TRANSMEMBRANE
DOMAIN RING H2 MOTIF PROTEIN 1,
receptor homology region
transmembrane domain ring H2 motif
protein 1		 -0.66 0.32 -0.31
37 AT5G60310 Concanavalin A-like lectin protein kinase family protein 0.66 0.31 -0.31
38 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.66 0.33 -0.33
39 AT5G07480 KAR-UP oxidoreductase 1 KAR-UP oxidoreductase 1 0.66 0.31 -0.3
40 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.66 0.31 -0.3
41 AT2G06640 transposable element gene -0.66 0.32 -0.32
42 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.3 -0.31
43 AT3G17100 sequence-specific DNA binding transcription factors -0.65 0.31 -0.33
44 AT1G74640 alpha/beta-Hydrolases superfamily protein -0.65 0.31 -0.33
45 AT4G03570 Cystatin/monellin superfamily protein 0.65 0.32 -0.31
46 AT1G17744 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.3 -0.31
47 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 0.65 0.32 -0.33
48 AT5G58840 Subtilase family protein -0.65 0.33 -0.33
49 AT1G32950 Subtilase family protein -0.65 0.33 -0.32
50 AT5G42980 thioredoxin 3 thioredoxin H-type 3, thioredoxin
3, ATTRXH3, thioredoxin 3,
THIOREDOXIN H3		 -0.65 0.3 -0.31
51 AT2G29410 metal tolerance protein B1 ATMTPB1, metal tolerance protein
B1		 -0.65 0.31 -0.32
52 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.65 0.31 -0.32
53 AT5G17640 Protein of unknown function (DUF1005) -0.64 0.3 -0.31
54 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 0.64 0.33 -0.33
55 AT2G17350 unknown protein; Has 119 Blast hits to 93 proteins in 40
species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi -
12; Plants - 44; Viruses - 0; Other Eukaryotes - 42
(source: NCBI BLink).		 -0.64 0.32 -0.31
56 AT2G31910 cation/H+ exchanger 21 cation/H+ exchanger 21, cation/H+
exchanger 21		 0.64 0.31 -0.31
57 AT3G13620 Amino acid permease family protein -0.64 0.32 -0.31
58 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 -0.64 0.34 -0.31
59 AT1G06740 transposable element gene 0.64 0.29 -0.31
60 AT5G09230 sirtuin 2 SIRTUIN 2, sirtuin 2 -0.64 0.3 -0.32
61 AT4G11440 Mitochondrial substrate carrier family protein 0.63 0.31 -0.33
62 AT3G10620 nudix hydrolase homolog 26 nudix hydrolase homolog 26, nudix
hydrolase homolog 26		 -0.63 0.3 -0.33
63 AT2G04730 pseudogene, F-box protein-related, contains TIGRFAM
TIGR01640 : F-box protein interaction domain; similar to
F-box protein family, AtFBX9 (GI:20197985) (Arabidopsis
thaliana)		 0.63 0.31 -0.31
64 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases -0.63 0.31 -0.33
65 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.63 0.32 -0.33
66 AT5G41350 RING/U-box superfamily protein -0.63 0.33 -0.32
67 AT5G17260 NAC domain containing protein 86 NAC domain containing protein 86,
NAC domain containing protein 86		 -0.63 0.3 -0.33
68 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.32 -0.32
69 AT3G63110 isopentenyltransferase 3 isopentenyltransferase 3,
isopentenyltransferase 3		 0.63 0.31 -0.3
70 AT1G55540 Nuclear pore complex protein 0.63 0.31 -0.31
71 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.33 -0.3
72 AT1G42420 transposable element gene -0.63 0.33 -0.32
73 AT3G05740 RECQ helicase l1 RECQ helicase l1 0.62 0.28 -0.31
74 AT1G52180 Aquaporin-like superfamily protein 0.62 0.29 -0.31
75 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.31 -0.31
76 AT1G26330 DNA binding 0.61 0.32 -0.3
77 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.31 -0.3
78 AT5G66890 Leucine-rich repeat (LRR) family protein 0.61 0.33 -0.31
79 AT2G04600 transposable element gene 0.61 0.32 -0.31
80 AT1G15460 HCO3- transporter family ARABIDOPSIS THALIANA REQUIRES HIGH
BORON 4, REQUIRES HIGH BORON 4		 0.61 0.3 -0.3
81 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.31 -0.31
82 AT2G37730 Protein of unknown function (DUF604) 0.61 0.33 -0.3
83 AT5G17960 Cysteine/Histidine-rich C1 domain family protein 0.61 0.31 -0.29
84 AT1G12220 Disease resistance protein (CC-NBS-LRR class) family RESISTANT TO P. SYRINGAE 5 0.61 0.31 -0.33
85 AT2G29680 cell division control 6 ATCDC6, cell division control 6 0.61 0.33 -0.3
86 AT3G23630 isopentenyltransferase 7 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 7,
isopentenyltransferase 7		 0.6 0.31 -0.33
87 AT2G11120 transposable element gene 0.6 0.31 -0.32
88 AT1G03720 Cysteine proteinases superfamily protein 0.6 0.31 -0.3
89 AT5G24340 3'-5' exonuclease domain-containing protein 0.6 0.32 -0.31
90 AT1G67570 Protein of unknown function (DUF3537) 0.59 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
91 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - -0.87 0.49 -0.44 C0067