AT5G20200 : -
Query Information
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AGICode AT5G20200
Description nucleoporin-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G20200 nucleoporin-related 1 0.3 -0.31
2 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.81 0.32 -0.34
3 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.8 0.32 -0.32
4 AT5G17270 Protein prenylyltransferase superfamily protein 0.78 0.31 -0.32
5 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.78 0.31 -0.31
6 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.77 0.31 -0.32
7 AT2G34750 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.77 0.32 -0.31
8 AT5G61970 signal recognition particle-related / SRP-related 0.76 0.32 -0.31
9 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.76 0.29 -0.32
10 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.76 0.31 -0.32
11 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase 0.76 0.32 -0.31
12 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.75 0.31 -0.33
13 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.74 0.31 -0.31
14 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.74 0.32 -0.31
15 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.74 0.33 -0.3
16 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.73 0.31 -0.31
17 AT5G65900 DEA(D/H)-box RNA helicase family protein 0.73 0.3 -0.31
18 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.73 0.33 -0.32
19 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.72 0.33 -0.3
20 AT1G19450 Major facilitator superfamily protein 0.72 0.32 -0.3
21 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.72 0.31 -0.32
22 AT4G30990 ARM repeat superfamily protein 0.72 0.33 -0.31
23 AT4G19210 RNAse l inhibitor protein 2 ATP-binding cassette E2,
ARABIDOPSIS THALIANA RNASE L
INHIBITOR PROTEIN 2, RNAse l
inhibitor protein 2		 0.72 0.32 -0.31
24 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 0.72 0.32 -0.3
25 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.34 -0.32
26 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0.71 0.31 -0.31
27 AT2G04030 Chaperone protein htpG family protein HEAT SHOCK PROTEIN 90.5, CR88,
EMBRYO DEFECTIVE 1956, HEAT SHOCK
PROTEIN 88.1, HEAT SHOCK PROTEIN
90.5		 0.71 0.31 -0.33
28 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein -0.71 0.32 -0.33
29 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.71 0.35 -0.32
30 AT3G59020 ARM repeat superfamily protein 0.71 0.34 -0.32
31 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.71 0.32 -0.3
32 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 0.71 0.3 -0.33
33 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 0.7 0.32 -0.29
34 AT4G27640 ARM repeat superfamily protein 0.7 0.31 -0.32
35 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 0.7 0.31 -0.33
36 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 0.7 0.32 -0.34
37 AT1G48040 Protein phosphatase 2C family protein 0.7 0.33 -0.3
38 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 0.7 0.3 -0.31
39 AT5G46210 cullin4 ATCUL4, cullin4 0.69 0.32 -0.32
40 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.29
41 AT1G11660 heat shock protein 70 (Hsp 70) family protein 0.69 0.3 -0.31
42 AT2G22125 binding cellulose synthase-interactive
protein 1, POM-POM 2		 0.69 0.32 -0.29
43 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 -0.69 0.34 -0.31
44 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.68 0.32 -0.3
45 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).		 0.68 0.3 -0.32
46 AT1G47330 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.68 0.31 -0.31
47 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.68 0.3 -0.29
48 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.68 0.31 -0.32
49 AT2G11360 transposable element gene 0.67 0.33 -0.33
50 AT1G06630 F-box/RNI-like superfamily protein -0.67 0.31 -0.33
51 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 -0.67 0.31 -0.32
52 AT1G14850 nucleoporin 155 nucleoporin 155 0.67 0.32 -0.32
53 AT1G26370 RNA helicase family protein 0.67 0.32 -0.31
54 AT3G44530 homolog of histone chaperone HIRA homolog of histone chaperone HIRA 0.67 0.31 -0.3
55 AT2G38180 SGNH hydrolase-type esterase superfamily protein 0.67 0.31 -0.33
56 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.67 0.3 -0.3
57 AT5G39960 GTP binding;GTP binding 0.67 0.31 -0.31
58 AT1G34550 Protein of unknown function (DUF616) EMBRYO DEFECTIVE 2756 0.67 0.31 -0.33
59 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.67 0.33 -0.35
60 AT3G10690 DNA GYRASE A DNA GYRASE A 0.67 0.32 -0.32
61 AT1G11270 F-box and associated interaction domains-containing protein -0.66 0.31 -0.29
62 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 -0.66 0.32 -0.32
63 AT4G29420 F-box/RNI-like superfamily protein -0.65 0.33 -0.3
64 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 -0.65 0.32 -0.32
65 AT5G66250 kinectin-related -0.64 0.33 -0.3
66 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.64 0.29 -0.32
67 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.64 0.32 -0.34
68 AT2G44850 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0565
(InterPro:IPR018881); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G45380.1); Has 138 Blast
hits to 138 proteins in 53 species: Archae - 0; Bacteria -
0; Metazoa - 73; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.64 0.31 -0.3
69 AT3G11730 Ras-related small GTP-binding family protein ATFP8, ARABIDOPSIS THALIANA RAB
GTPASE HOMOLOG D1, RAB GTPASE
HOMOLOG D1		 -0.63 0.31 -0.29
70 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.33
71 AT2G40410 Staphylococcal nuclease homologue -0.62 0.31 -0.31
72 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.62 0.32 -0.33
73 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 -0.62 0.32 -0.34
74 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.29 -0.31
75 AT1G72760 Protein kinase superfamily protein -0.61 0.33 -0.33
76 AT5G12310 RING/U-box superfamily protein -0.61 0.32 -0.32
77 AT4G18330 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.6 0.3 -0.32
78 AT5G56070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G56050.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.6 0.31 -0.3
79 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.6 0.32 -0.32
80 AT1G79420 Protein of unknown function (DUF620) -0.59 0.29 -0.32
81 AT3G30370 CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant
(InterPro:IPR004332); BEST Arabidopsis thaliana protein
match is: SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein (TAIR:AT1G18050.1);
Has 35 Blast hits to 35 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.32 -0.32
82 AT3G13140 hydroxyproline-rich glycoprotein family protein -0.58 0.32 -0.29
83 AT1G53060 Legume lectin family protein -0.58 0.35 -0.31
84 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.57 0.32 -0.33
85 AT3G44950 glycine-rich protein -0.57 0.32 -0.33
86 AT2G18610 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.33 -0.33
87 AT4G27660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits
to 109 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 5 (source: NCBI BLink).		 -0.56 0.32 -0.33
88 AT2G20620 Protein of unknown function (DUF626) -0.56 0.3 -0.34
89 AT1G26860 transposable element gene -0.56 0.32 -0.32
90 AT2G41590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G25200.1); Has 221 Blast hits
to 217 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.32 -0.32
91 AT5G24540 beta glucosidase 31 beta glucosidase 31 -0.56 0.33 -0.3
92 AT5G14990 BEST Arabidopsis thaliana protein match is: myosin heavy
chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to
6001 proteins in 578 species: Archae - 107; Bacteria - 678;
Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16;
Other Eukaryotes - 2578 (source: NCBI BLink).		 -0.55 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		0.73 0.47 -0.46 C0105