AT5G20030 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G20030
Description Plant Tudor-like RNA-binding protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G20030 Plant Tudor-like RNA-binding protein 1 0.32 -0.31
2 AT4G23460 Adaptin family protein -0.85 0.33 -0.34
3 AT2G41710 Integrase-type DNA-binding superfamily protein 0.85 0.31 -0.32
4 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 -0.83 0.29 -0.31
5 AT1G68520 B-box type zinc finger protein with CCT domain 0.82 0.3 -0.3
6 AT5G65720 nitrogen fixation S (NIFS)-like 1 ARABIDOPSIS THALIANA NITROGEN
FIXATION S (NIFS)-LIKE 1, NITROGEN
FIXATION S HOMOLOG 1, nitrogen
fixation S (NIFS)-like 1, NITROGEN
FIXATION S HOMOLOG 1		 -0.82 0.33 -0.3
7 AT5G57440 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 GLYCEROL-3-PHOSPHATASE 2, GS1 0.82 0.34 -0.32
8 AT1G66230 myb domain protein 20 myb domain protein 20, myb domain
protein 20		 0.8 0.3 -0.3
9 AT4G11380 Adaptin family protein -0.8 0.31 -0.33
10 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.79 0.33 -0.34
11 AT4G13345 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 maternal effect embryo arrest 55 -0.79 0.32 -0.28
12 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.78 0.33 -0.33
13 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.78 0.33 -0.33
14 AT5G35480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.78 0.33 -0.31
15 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 -0.78 0.3 -0.31
16 AT1G07510 FTSH protease 10 FTSH protease 10 -0.77 0.3 -0.31
17 AT5G55040 DNA-binding bromodomain-containing protein -0.77 0.35 -0.33
18 AT1G50030 target of rapamycin target of rapamycin -0.77 0.33 -0.34
19 AT1G75850 VPS35 homolog B VPS35 homolog B -0.77 0.31 -0.31
20 AT1G07880 Protein kinase superfamily protein ATMPK13 0.77 0.32 -0.27
21 AT3G08590 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 2		 -0.76 0.32 -0.32
22 AT5G08560 transducin family protein / WD-40 repeat family protein -0.75 0.3 -0.31
23 AT1G68820 Transmembrane Fragile-X-F-associated protein -0.74 0.31 -0.32
24 AT3G53230 ATPase, AAA-type, CDC48 protein -0.74 0.32 -0.32
25 AT4G35020 RAC-like 3 RAC-like 3, ATROP6, RAC-like 3,
RHO1PS, RHO-RELATED PROTEIN FROM
PLANTS 6		 0.74 0.3 -0.32
26 AT3G52780 Purple acid phosphatases superfamily protein ATPAP20, PAP20 -0.73 0.3 -0.3
27 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 0.73 0.31 -0.33
28 AT3G44940 Protein of unknown function (DUF1635) 0.73 0.3 -0.3
29 AT1G08620 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 PKDM7D -0.73 0.31 -0.33
30 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING -0.73 0.31 -0.34
31 AT4G13250 NAD(P)-binding Rossmann-fold superfamily protein NON-YELLOW COLORING 1 -0.73 0.31 -0.3
32 AT5G51950 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 0.73 0.3 -0.32
33 AT1G15130 Endosomal targeting BRO1-like domain-containing protein -0.73 0.31 -0.31
34 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 -0.73 0.31 -0.33
35 AT1G30515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.31 -0.3
36 AT2G17040 NAC domain containing protein 36 NAC domain containing protein 36,
NAC domain containing protein 36		 0.72 0.32 -0.35
37 AT3G10370 FAD-dependent oxidoreductase family protein SUGAR-DEPENDENT 6 -0.72 0.32 -0.31
38 AT1G78210 alpha/beta-Hydrolases superfamily protein -0.72 0.3 -0.32
39 AT4G29940 pathogenesis related homeodomain protein A pathogenesis related homeodomain
protein A		 -0.72 0.31 -0.33
40 AT1G10390 Nucleoporin autopeptidase -0.72 0.33 -0.31
41 AT5G39040 transporter associated with antigen processing protein 2 ATP-binding cassette B27, ALUMINUM
SENSITIVE 1, AtALS1, ARABIDOPSIS
THALIANA TRANSPORTER ASSOCIATED
WITH ANTIGEN PROCESSING PROTEIN 2,
transporter associated with
antigen processing protein 2		 -0.71 0.31 -0.3
42 AT4G29380 protein kinase family protein / WD-40 repeat family protein Arabidopsis thaliana vacuolar
protein sorting 15, vacuolar
protein sorting 15		 -0.71 0.31 -0.31
43 AT5G64230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.71 0.32 -0.33
44 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.31 -0.31
45 AT1G22940 thiamin biosynthesis protein, putative TH-1, THIAMINE REQUIRING 1,
THIAMINEE		 0.71 0.31 -0.33
46 AT4G04620 Ubiquitin-like superfamily protein autophagy 8b -0.7 0.32 -0.32
47 AT3G26050 TPX2 (targeting protein for Xklp2) protein family 0.7 0.32 -0.33
48 AT3G53310 AP2/B3-like transcriptional factor family protein 0.7 0.33 -0.31
49 AT3G14010 CTC-interacting domain 4 CTC-interacting domain 4 -0.7 0.33 -0.33
50 AT1G66340 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 AtETR1, ETHYLENE INSENSITIVE 1,
ETHYLENE RESPONSE, ETHYLENE
RESPONSE 1		 -0.7 0.3 -0.3
51 AT5G06120 ARM repeat superfamily protein -0.7 0.33 -0.32
52 AT2G22890 Kua-ubiquitin conjugating enzyme hybrid localisation domain 0.7 0.32 -0.31
53 AT5G59580 UDP-glucosyl transferase 76E1 UDP-glucosyl transferase 76E1 -0.7 0.31 -0.33
54 AT1G78610 mechanosensitive channel of small conductance-like 6 mechanosensitive channel of small
conductance-like 6		 -0.7 0.3 -0.32
55 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.32 -0.32
56 AT4G10040 cytochrome c-2 cytochrome c-2 -0.7 0.3 -0.31
57 AT5G57130 Clp amino terminal domain-containing protein -0.69 0.31 -0.32
58 AT4G32800 Integrase-type DNA-binding superfamily protein 0.69 0.32 -0.3
59 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 -0.69 0.31 -0.34
60 AT2G07360 SH3 domain-containing protein -0.69 0.31 -0.3
61 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 -0.69 0.3 -0.31
62 AT5G09590 mitochondrial HSO70 2 HEAT SHOCK COGNATE, mitochondrial
HSO70 2		 -0.69 0.29 -0.31
63 AT2G20320 DENN (AEX-3) domain-containing protein -0.69 0.33 -0.33
64 AT3G61210 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.69 0.32 -0.31
65 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 0.69 0.3 -0.32
66 AT3G51620 PAP/OAS1 substrate-binding domain superfamily -0.69 0.32 -0.32
67 AT5G56190 Transducin/WD40 repeat-like superfamily protein -0.69 0.32 -0.31
68 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 0.69 0.32 -0.33
69 AT5G47480 RGPR-related -0.69 0.34 -0.31
70 AT5G43560 TRAF-like superfamily protein -0.69 0.32 -0.33
71 AT4G25940 ENTH/ANTH/VHS superfamily protein 0.69 0.3 -0.29
72 AT3G23790 AMP-dependent synthetase and ligase family protein acyl activating enzyme 16 -0.69 0.3 -0.32
73 AT1G20630 catalase 1 catalase 1 -0.69 0.32 -0.32
74 AT5G11040 TRS120 AtTRS120, TRS120 -0.68 0.32 -0.31
75 AT4G00900 ER-type Ca2+-ATPase 2 ARABIDOPSIS THALIANA ER-TYPE
CA2+-ATPASE 2, ER-type Ca2+-ATPase
2		 -0.68 0.31 -0.31
76 AT5G55780 Cysteine/Histidine-rich C1 domain family protein 0.68 0.34 -0.3
77 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1		 0.68 0.31 -0.33
78 AT4G17140 pleckstrin homology (PH) domain-containing protein -0.68 0.33 -0.31
79 AT2G04450 nudix hydrolase homolog 6 nudix hydrolase homolog 6,
Arabidopsis thaliana nucleoside
diphosphate linked to some moiety
X 6, nudix hydrolase homolog 6,
nucleoside diphosphates linked to
some moiety X 6		 0.68 0.31 -0.31
80 AT1G21630 Calcium-binding EF hand family protein -0.68 0.32 -0.3
81 AT3G48360 BTB and TAZ domain protein 2 ATBT2, BTB and TAZ domain protein
2		 0.68 0.31 -0.32
82 AT1G72820 Mitochondrial substrate carrier family protein 0.68 0.32 -0.32
83 AT1G74250 DNAJ heat shock N-terminal domain-containing protein -0.68 0.31 -0.3
84 AT3G58200 TRAF-like family protein 0.68 0.34 -0.29
85 AT5G56350 Pyruvate kinase family protein -0.68 0.31 -0.3
86 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein 0.68 0.33 -0.35
87 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 -0.68 0.32 -0.3
88 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 -0.68 0.31 -0.3
89 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 -0.68 0.32 -0.32
90 AT5G65350 histone 3 11 histone 3 11 0.68 0.31 -0.32
91 AT4G31870 glutathione peroxidase 7 GLUTATHIONE PEROXIDASE 7,
glutathione peroxidase 7		 -0.68 0.29 -0.3
92 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS 0.68 0.31 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - -0.82 0.44 -0.46 C0067
94 C0074 Cystine L-Cystine L-Cystine protein precursor -0.78 0.44 -0.46 C0074
95 C0144 Maltose D-Maltose α-Maltose starch degradation II -0.69 0.43 -0.47 C0144