AGICode | AT5G32450 |
Description | RNA binding (RRM/RBD/RNP motifs) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G32450 | RNA binding (RRM/RBD/RNP motifs) family protein | 1 | 0.33 | -0.33 | |||
2 | AT3G06060 | NAD(P)-binding Rossmann-fold superfamily protein | TSC10A | 0.81 | 0.31 | -0.32 | ||
3 | AT1G27310 | nuclear transport factor 2A | nuclear transport factor 2A | 0.79 | 0.33 | -0.33 | ||
4 | AT1G04220 | 3-ketoacyl-CoA synthase 2 | 3-ketoacyl-CoA synthase 2 | -0.79 | 0.31 | -0.31 | ||
5 | AT1G05810 | RAB GTPase homolog A5E | ARA, ARA-1, ATRAB11D, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A5E, RAB GTPase homolog A5E |
0.79 | 0.31 | -0.32 | ||
6 | AT2G30010 | TRICHOME BIREFRINGENCE-LIKE 45 | TRICHOME BIREFRINGENCE-LIKE 45 | 0.78 | 0.32 | -0.33 | ||
7 | AT2G38310 | PYR1-like 4 | PYR1-like 4, regulatory components of ABA receptor 10 |
0.78 | 0.3 | -0.32 | ||
8 | AT3G17390 | S-adenosylmethionine synthetase family protein | METHIONINE ADENOSYLTRANSFERASE 4, METHIONINE OVER-ACCUMULATOR 3, S-ADENOSYLMETHIONINE SYNTHETASE 3 |
0.78 | 0.33 | -0.3 | ||
9 | AT1G03870 | FASCICLIN-like arabinoogalactan 9 | FASCICLIN-like arabinoogalactan 9 | 0.77 | 0.32 | -0.32 | ||
10 | AT1G76990 | ACT domain repeat 3 | ACT domain repeat 3 | 0.77 | 0.31 | -0.31 | ||
11 | AT2G18910 | hydroxyproline-rich glycoprotein family protein | 0.77 | 0.31 | -0.3 | |||
12 | AT4G14000 | Putative methyltransferase family protein | 0.77 | 0.31 | -0.33 | |||
13 | AT1G14730 | Cytochrome b561/ferric reductase transmembrane protein family |
-0.77 | 0.31 | -0.31 | |||
14 | AT3G05000 | Transport protein particle (TRAPP) component | 0.77 | 0.33 | -0.31 | |||
15 | AT1G55740 | seed imbibition 1 | seed imbibition 1, raffinose synthase 1, seed imbibition 1 |
-0.77 | 0.31 | -0.32 | ||
16 | AT3G21200 | proton gradient regulation 7 | proton gradient regulation 7 | 0.76 | 0.35 | -0.31 | ||
17 | AT2G01580 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.76 | 0.34 | -0.29 | |||
18 | AT4G35000 | ascorbate peroxidase 3 | ascorbate peroxidase 3 | 0.75 | 0.31 | -0.29 | ||
19 | AT1G70490 | Ras-related small GTP-binding family protein | ARFA1D, ATARFA1D | 0.75 | 0.32 | -0.31 | ||
20 | AT2G15680 | Calcium-binding EF-hand family protein | AtCML30, calmodulin-like 30 | 0.75 | 0.31 | -0.3 | ||
21 | AT1G18640 | 3-phosphoserine phosphatase | 3-phosphoserine phosphatase | 0.75 | 0.32 | -0.32 | ||
22 | AT5G15350 | early nodulin-like protein 17 | AtENODL17, early nodulin-like protein 17 |
0.75 | 0.28 | -0.34 | ||
23 | AT1G74910 | ADP-glucose pyrophosphorylase family protein | 0.75 | 0.34 | -0.33 | |||
24 | AT4G17870 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
PYRABACTIN RESISTANCE 1, regulatory component of ABA receptor 11 |
0.74 | 0.32 | -0.3 | ||
25 | AT3G01120 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
AtCGS1, A. thaliana cystathionine gamma-synthetase 1, CYSTATHIONINE GAMMA-SYNTHASE, CYSTATHIONINE GAMMA-SYNTHASE 1, METHIONINE OVERACCUMULATION 1 |
0.74 | 0.3 | -0.32 | ||
26 | AT1G33811 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.74 | 0.3 | -0.3 | |||
27 | AT1G22330 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.74 | 0.33 | -0.31 | |||
28 | AT1G11650 | RNA-binding (RRM/RBD/RNP motifs) family protein | ATRBP45B, RBP45B | 0.74 | 0.33 | -0.33 | ||
29 | AT2G47810 | nuclear factor Y, subunit B5 | nuclear factor Y, subunit B5 | -0.74 | 0.35 | -0.33 | ||
30 | AT2G27030 | calmodulin 5 | ACAM-2, calmodulin 5 | 0.74 | 0.3 | -0.31 | ||
31 | AT2G20140 | AAA-type ATPase family protein | regulatory particle AAA-ATPase 2b | 0.73 | 0.33 | -0.31 | ||
32 | AT1G21070 | Nucleotide-sugar transporter family protein | 0.73 | 0.32 | -0.33 | |||
33 | AT2G18050 | histone H1-3 | histone H1-3 | -0.73 | 0.3 | -0.28 | ||
34 | AT1G22330 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.73 | 0.32 | -0.33 | |||
35 | AT2G19900 | NADP-malic enzyme 1 | Arabidopsis thaliana NADP-malic enzyme 1, NADP-malic enzyme 1 |
-0.73 | 0.31 | -0.31 | ||
36 | AT4G21870 | HSP20-like chaperones superfamily protein | 0.73 | 0.3 | -0.33 | |||
37 | AT4G20780 | calmodulin like 42 | calmodulin like 42 | 0.72 | 0.33 | -0.3 | ||
38 | AT1G07140 | Pleckstrin homology (PH) domain superfamily protein | SIRANBP | 0.72 | 0.33 | -0.32 | ||
39 | AT5G11110 | sucrose phosphate synthase 2F | sucrose phosphate synthase 2F, KAONASHI 2, SUCROSE PHOSPHATE SYNTHASE 1, sucrose phosphate synthase 2F, sucrose-phosphate synthase A2 |
-0.72 | 0.32 | -0.31 | ||
40 | AT3G48510 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.32 | -0.31 | |||
41 | AT2G18030 | Peptide methionine sulfoxide reductase family protein | 0.72 | 0.32 | -0.3 | |||
42 | AT5G47435 | formyltetrahydrofolate deformylase, putative | 0.72 | 0.31 | -0.3 | |||
43 | AT1G33240 | GT-2-like 1 | GT2-LIKE 1, GT-2-like 1 | 0.71 | 0.34 | -0.31 | ||
44 | AT3G52290 | IQ-domain 3 | IQ-domain 3 | 0.71 | 0.33 | -0.34 | ||
45 | AT1G24170 | Nucleotide-diphospho-sugar transferases superfamily protein | GALACTURONOSYLTRANSFERASE-LIKE 8, LGT9 |
0.71 | 0.32 | -0.29 | ||
46 | AT5G09650 | pyrophosphorylase 6 | pyrophosphorylase 6, pyrophosphorylase 6 |
0.7 | 0.34 | -0.33 | ||
47 | AT4G34000 | abscisic acid responsive elements-binding factor 3 | abscisic acid responsive elements-binding factor 3, AtABF3, DC3 PROMOTER-BINDING FACTOR 5 |
-0.7 | 0.31 | -0.33 | ||
48 | AT3G13784 | cell wall invertase 5 | cell wall invertase 5, cell wall invertase 5 |
-0.7 | 0.32 | -0.34 | ||
49 | AT5G46790 | PYR1-like 1 | PYR1-like 1, regulatory components of ABA receptor 12 |
0.7 | 0.34 | -0.3 | ||
50 | AT4G33550 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.69 | 0.31 | -0.31 | |||
51 | AT2G01070 | Lung seven transmembrane receptor family protein | 0.69 | 0.27 | -0.3 | |||
52 | AT1G12310 | Calcium-binding EF-hand family protein | 0.69 | 0.32 | -0.31 | |||
53 | AT3G24310 | myb domain protein 305 | MYB DOMAIN PROTEIN 71, myb domain protein 305 |
-0.69 | 0.34 | -0.29 | ||
54 | AT2G41190 | Transmembrane amino acid transporter family protein | -0.69 | 0.33 | -0.32 | |||
55 | AT4G21410 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29 |
0.69 | 0.33 | -0.31 | ||
56 | AT4G13720 | Inosine triphosphate pyrophosphatase family protein | 0.69 | 0.31 | -0.34 | |||
57 | AT5G18830 | squamosa promoter binding protein-like 7 | SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7, squamosa promoter binding protein-like 7 |
-0.69 | 0.31 | -0.32 | ||
58 | AT5G64813 | Ras-related small GTP-binding family protein | Light Insensitive Period1 | 0.69 | 0.31 | -0.34 | ||
59 | AT2G21195 | unknown protein; Has 28 Blast hits to 28 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.68 | 0.33 | -0.29 | |||
60 | AT1G45170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.68 | 0.34 | -0.31 | |||
61 | AT5G07330 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.68 | 0.3 | -0.32 | |||
62 | AT4G30160 | villin 4 | ATVLN4, villin 4 | 0.68 | 0.32 | -0.31 | ||
63 | AT5G63560 | HXXXD-type acyl-transferase family protein | -0.68 | 0.3 | -0.33 | |||
64 | AT3G61130 | galacturonosyltransferase 1 | galacturonosyltransferase 1, LGT1 | 0.68 | 0.33 | -0.31 | ||
65 | AT1G72430 | SAUR-like auxin-responsive protein family | 0.68 | 0.32 | -0.32 | |||
66 | AT4G17300 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
ATNS1, NS1, ovule abortion 8 | 0.68 | 0.32 | -0.32 | ||
67 | AT2G30520 | Phototropic-responsive NPH3 family protein | ROOT PHOTOTROPISM 2 | 0.68 | 0.32 | -0.31 | ||
68 | AT5G64850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.67 | 0.33 | -0.31 | |||
69 | AT3G48750 | cell division control 2 | cell division control 2, CDC2A, CDC2AAT, CDK2, CDKA1, CDKA;1 |
0.67 | 0.33 | -0.33 | ||
70 | AT4G23493 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.67 | 0.31 | -0.32 | |||
71 | AT4G34770 | SAUR-like auxin-responsive protein family | 0.67 | 0.32 | -0.32 | |||
72 | AT4G30060 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
0.67 | 0.31 | -0.31 | |||
73 | AT5G59320 | lipid transfer protein 3 | lipid transfer protein 3 | -0.67 | 0.31 | -0.3 | ||
74 | AT5G53870 | early nodulin-like protein 1 | AtENODL1, early nodulin-like protein 1 |
-0.67 | 0.32 | -0.33 | ||
75 | AT1G24600 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.67 | 0.3 | -0.27 | |||
76 | AT1G75960 | AMP-dependent synthetase and ligase family protein | 0.67 | 0.3 | -0.32 | |||
77 | AT2G46330 | arabinogalactan protein 16 | arabinogalactan protein 16, ATAGP16 |
0.66 | 0.32 | -0.32 | ||
78 | AT1G64110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
DUO1-activated ATPase 1 | -0.66 | 0.32 | -0.3 | ||
79 | AT5G50360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.66 | 0.32 | -0.32 | |||
80 | AT3G26700 | Protein kinase superfamily protein | 0.66 | 0.34 | -0.33 | |||
81 | AT4G18460 | D-Tyr-tRNA(Tyr) deacylase family protein | 0.66 | 0.32 | -0.34 | |||
82 | AT4G34265 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.32 | -0.32 | |||
83 | AT5G37500 | gated outwardly-rectifying K+ channel | gated outwardly-rectifying K+ channel |
-0.66 | 0.3 | -0.3 | ||
84 | AT3G16030 | lectin protein kinase family protein | CALLUS EXPRESSION OF RBCS 101 | -0.66 | 0.31 | -0.34 | ||
85 | AT4G32840 | phosphofructokinase 6 | phosphofructokinase 6 | 0.66 | 0.31 | -0.32 | ||
86 | AT1G52690 | Late embryogenesis abundant protein (LEA) family protein | LATE EMBRYOGENESIS ABUNDANT 7 | -0.65 | 0.31 | -0.33 | ||
87 | AT5G14550 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.65 | 0.3 | -0.32 | |||
88 | AT3G58550 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.65 | 0.33 | -0.31 | |||
89 | AT2G40900 | nodulin MtN21 /EamA-like transporter family protein | -0.65 | 0.29 | -0.3 | |||
90 | AT5G06730 | Peroxidase superfamily protein | -0.65 | 0.33 | -0.33 | |||
91 | AT4G19810 | Glycosyl hydrolase family protein with chitinase insertion domain |
class V chitinase | -0.65 | 0.34 | -0.33 | ||
92 | AT2G22590 | UDP-Glycosyltransferase superfamily protein | -0.64 | 0.33 | -0.32 | |||
93 | AT2G16890 | UDP-Glycosyltransferase superfamily protein | -0.64 | 0.29 | -0.31 | |||
94 | AT2G46920 | Protein phosphatase 2C family protein | poltergeist | -0.64 | 0.32 | -0.32 | ||
95 | AT5G05160 | Leucine-rich repeat protein kinase family protein | REDUCED IN LATERAL GROWTH1 | -0.63 | 0.32 | -0.32 | ||
96 | AT3G25990 | Homeodomain-like superfamily protein | -0.63 | 0.32 | -0.32 | |||
97 | AT3G03170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.31 | -0.33 | |||
98 | AT1G69270 | receptor-like protein kinase 1 | receptor-like protein kinase 1 | -0.63 | 0.36 | -0.32 | ||
99 | AT1G62710 | beta vacuolar processing enzyme | beta vacuolar processing enzyme, BETAVPE |
-0.63 | 0.32 | -0.32 | ||
100 | AT1G23010 | Cupredoxin superfamily protein | Low Phosphate Root1 | -0.63 | 0.3 | -0.33 | ||
101 | AT5G07920 | diacylglycerol kinase1 | DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 |
-0.63 | 0.32 | -0.32 | ||
102 | AT1G66830 | Leucine-rich repeat protein kinase family protein | -0.62 | 0.3 | -0.3 | |||
103 | AT3G51750 | unknown protein; Has 15 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.33 | -0.32 | |||
104 | AT4G18425 | Protein of unknown function (DUF679) | -0.62 | 0.31 | -0.33 | |||
105 | AT2G43570 | chitinase, putative | chitinase, putative | -0.62 | 0.31 | -0.33 | ||
106 | AT4G16240 | unknown protein; Has 17010 Blast hits to 4557 proteins in 509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537; Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes - 1688 (source: NCBI BLink). |
-0.61 | 0.31 | -0.32 | |||
107 | AT4G00200 | AT hook motif DNA-binding family protein | -0.61 | 0.31 | -0.3 | |||
108 | AT1G16850 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.32 | -0.28 | |||
109 | AT1G16310 | Cation efflux family protein | -0.59 | 0.31 | -0.31 | |||
110 | AT5G57810 | tetraspanin15 | tetraspanin15 | -0.59 | 0.32 | -0.31 | ||
111 | AT4G28040 | nodulin MtN21 /EamA-like transporter family protein | -0.59 | 0.33 | -0.3 |