AT5G28410 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G28410
Description unknown protein; Has 8 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G28410 unknown protein; Has 8 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
1 0.32 -0.32
2 AT5G19700 MATE efflux family protein 0.76 0.33 -0.33
3 AT2G23360 Plant protein of unknown function (DUF869) 0.74 0.31 -0.32
4 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.3 -0.31
5 AT3G59130 Cysteine/Histidine-rich C1 domain family protein -0.71 0.33 -0.32
6 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 0.7 0.31 -0.32
7 AT5G39370 Curculin-like (mannose-binding) lectin family protein -0.69 0.33 -0.32
8 AT1G68270 AMP-dependent synthetase and ligase family protein 0.68 0.33 -0.32
9 AT3G22070 proline-rich family protein -0.68 0.31 -0.31
10 AT2G47160 HCO3- transporter family AtBOR1, REQUIRES HIGH BORON 1 0.67 0.34 -0.31
11 AT3G12000 S-locus related protein SLR1, putative (S1) 0.67 0.29 -0.31
12 AT2G11360 transposable element gene 0.66 0.3 -0.31
13 AT1G15870 Mitochondrial glycoprotein family protein 0.66 0.31 -0.32
14 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 0.66 0.34 -0.32
15 AT2G36480 ENTH/VHS family protein 0.65 0.32 -0.3
16 AT2G21710 Mitochondrial transcription termination factor family
protein
embryo defective 2219 0.65 0.33 -0.31
17 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 0.65 0.32 -0.3
18 AT5G57200 ENTH/ANTH/VHS superfamily protein 0.65 0.31 -0.3
19 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.32 -0.31
20 AT2G29220 Concanavalin A-like lectin protein kinase family protein 0.65 0.3 -0.31
21 AT3G09430 unknown protein; Has 17 Blast hits to 17 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.65 0.3 -0.33
22 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).
-0.65 0.27 -0.3
23 AT5G43710 Glycosyl hydrolase family 47 protein 0.64 0.32 -0.31
24 AT2G35750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
0.64 0.32 -0.29
25 AT4G28400 Protein phosphatase 2C family protein -0.64 0.32 -0.3
26 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.64 0.32 -0.32
27 AT4G14460 transposable element gene 0.64 0.3 -0.31
28 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
MINIYO 0.63 0.32 -0.33
29 AT5G51760 Protein phosphatase 2C family protein ABA-hypersensitive germination 1 0.63 0.33 -0.32
30 AT5G66130 RADIATION SENSITIVE 17 RADIATION SENSITIVE 17, RADIATION
SENSITIVE 17
0.63 0.32 -0.34
31 AT1G36990 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in
339 species: Archae - 2; Bacteria - 1372; Metazoa - 990;
Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes -
1593 (source: NCBI BLink).
0.63 0.33 -0.32
32 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein
-0.63 0.31 -0.31
33 AT1G07300 josephin protein-related -0.63 0.31 -0.32
34 AT5G26180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
0.63 0.3 -0.31
35 AT4G08210 Pentatricopeptide repeat (PPR-like) superfamily protein 0.63 0.32 -0.32
36 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.63 0.32 -0.34
37 AT1G08100 nitrate transporter 2.2 ACH2, NITRATE TRANSPORTER 2.2,
nitrate transporter 2.2, NRT2;2AT
0.62 0.32 -0.31
38 AT4G13230 Late embryogenesis abundant protein (LEA) family protein -0.62 0.33 -0.33
39 AT5G61140 U5 small nuclear ribonucleoprotein helicase 0.62 0.34 -0.31
40 AT1G22050 membrane-anchored ubiquitin-fold protein 6 precursor membrane-anchored ubiquitin-fold
protein 6 precursor
-0.62 0.31 -0.32
41 AT5G44880 transposable element gene -0.62 0.31 -0.35
42 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain
0.61 0.3 -0.31
43 AT1G32030 Domain of unknown function (DUF313) 0.61 0.32 -0.31
44 AT5G06320 NDR1/HIN1-like 3 NDR1/HIN1-like 3 -0.61 0.31 -0.3
45 AT2G31130 unknown protein; Has 116 Blast hits to 113 proteins in 44
species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2;
Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source:
NCBI BLink).
-0.61 0.33 -0.31
46 AT4G33800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.61 0.32 -0.32
47 AT5G15070 Phosphoglycerate mutase-like family protein 0.61 0.31 -0.33
48 AT5G22750 DNA/RNA helicase protein RAD5, RAD5A 0.61 0.31 -0.33
49 AT5G25410 Protein of Unknown Function (DUF239) 0.61 0.33 -0.3
50 AT2G10760 transposable element gene 0.6 0.31 -0.32
51 AT2G11150 transposable element gene 0.6 0.33 -0.31
52 AT2G04830 Protein of unknown function (DUF295) 0.6 0.31 -0.3
53 AT1G68000 phosphatidylinositol synthase 1 PHOSPHATIDYLINOSITOL SYNTHASE,
phosphatidylinositol synthase 1,
phosphatidylinositol synthase 1
-0.6 0.32 -0.3
54 AT3G42350 transposable element gene 0.6 0.34 -0.31
55 AT4G31900 chromatin remodeling factor, putative PICKLE RELATED 2 0.6 0.33 -0.31
56 AT2G15130 Plant basic secretory protein (BSP) family protein 0.6 0.3 -0.31
57 AT1G17790 DNA-binding bromodomain-containing protein -0.6 0.31 -0.3
58 AT1G79990 structural molecules 0.6 0.33 -0.31
59 AT2G30680 BEST Arabidopsis thaliana protein match is: glucan
synthase-like 3 (TAIR:AT2G31960.2); Has 80 Blast hits to 80
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.59 0.32 -0.31
60 AT2G24000 serine carboxypeptidase-like 22 serine carboxypeptidase-like 22 -0.59 0.31 -0.32
61 AT2G03520 ureide permease 4 ureide permease 4, ureide permease
4
0.59 0.31 -0.34
62 AT1G32840 transposable element gene -0.59 0.3 -0.31
63 AT3G24650 AP2/B3-like transcriptional factor family protein ABA INSENSITIVE 3, ABSCISIC ACID
INSENSITIVE 3, SUGAR INSENSITIVE
10
0.59 0.34 -0.32
64 AT3G53440 Homeodomain-like superfamily protein 0.59 0.32 -0.31
65 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein 0.58 0.32 -0.33
66 AT5G42960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, plastid, chloroplast envelope;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).
-0.58 0.29 -0.3
67 AT3G01880 Plant protein of unknown function (DUF946) 0.58 0.33 -0.33
68 AT4G36050 endonuclease/exonuclease/phosphatase family protein 0.58 0.31 -0.32
69 AT3G28780 Protein of unknown function (DUF1216) 0.58 0.34 -0.31
70 AT1G20135 GDSL-like Lipase/Acylhydrolase family protein 0.58 0.3 -0.34
71 AT3G58390 Eukaryotic release factor 1 (eRF1) family protein -0.58 0.31 -0.3
72 AT1G25460 NAD(P)-binding Rossmann-fold superfamily protein -0.58 0.33 -0.33
73 AT4G08030 transposable element gene -0.58 0.31 -0.32
74 AT3G03860 APR-like 5 APR-like 5, APR-like 5 -0.57 0.31 -0.3
75 AT3G42400 transposable element gene -0.57 0.31 -0.31
76 AT1G73290 serine carboxypeptidase-like 5 serine carboxypeptidase-like 5 -0.57 0.31 -0.32
77 AT4G25720 glutaminyl cyclase ARABIDOPSIS THALIANA GLUTAMINYL
CYCLASE, glutaminyl cyclase,
GLUTAMINYL CYCLOTRANSFERASE
-0.57 0.32 -0.32
78 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ARABIDOPSIS THALIANA ATAXIA
TELANGIECTASIA-MUTATED AND
RAD3-RELATED, Ataxia
telangiectasia-mutated and
RAD3-related, ATRAD3
0.57 0.33 -0.34
79 AT4G00870 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
-0.56 0.31 -0.32
80 AT5G60320 Concanavalin A-like lectin protein kinase family protein -0.56 0.3 -0.33
81 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 -0.56 0.33 -0.32
82 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.56 0.32 -0.3
83 AT4G27280 Calcium-binding EF-hand family protein -0.56 0.3 -0.33
84 AT1G09070 soybean gene regulated by cold-2 SOYBEAN GENE REGULATED BY COLD-2,
soybean gene regulated by cold-2
-0.56 0.33 -0.32
85 AT4G10940 RING/U-box protein -0.56 0.32 -0.31
86 AT1G42690 transposable element gene -0.55 0.32 -0.33
87 AT3G04100 AGAMOUS-like 57 AGAMOUS-like 57 -0.55 0.3 -0.29
88 AT3G43530 transposable element gene -0.55 0.3 -0.33
89 AT2G22500 uncoupling protein 5 PLANT UNCOUPLING MITOCHONDRIAL
PROTEIN 5, DICARBOXYLATE CARRIER
1, uncoupling protein 5
-0.55 0.33 -0.32
90 AT5G24540 beta glucosidase 31 beta glucosidase 31 -0.55 0.32 -0.31
91 AT3G56710 sigma factor binding protein 1 sigma factor binding protein 1 -0.54 0.33 -0.32
92 AT2G45320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 10 growth stages; Has 45 Blast hits to 45 proteins
in 16 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
-0.53 0.34 -0.33
93 AT2G04560 transferases, transferring glycosyl groups AtLpxB, lipid X B -0.53 0.32 -0.35
94 AT4G11280 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 1-aminocyclopropane-1-carboxylic
acid (acc) synthase 6, ATACS6
-0.52 0.32 -0.33
95 AT3G55870 ADC synthase superfamily protein -0.52 0.31 -0.29
96 AT3G51560 Disease resistance protein (TIR-NBS-LRR class) family -0.52 0.3 -0.32
97 AT2G22750 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
-0.52 0.32 -0.31
98 AT1G09610 Protein of unknown function (DUF579) -0.52 0.32 -0.3
99 AT4G11190 Disease resistance-responsive (dirigent-like protein)
family protein
-0.52 0.34 -0.3