AT5G20880 : -
Query Information
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AGICode AT5G20880
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G20880 transposable element gene 1 0.34 -0.31
2 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 0.79 0.33 -0.33
3 AT1G04750 vesicle-associated membrane protein 721 AT VAMP7B, ATVAMP721,
vesicle-associated membrane
protein 721, VESICLE-ASSOCIATED
MEMBRANE PROTEIN 7B		 0.74 0.33 -0.33
4 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.73 0.31 -0.3
5 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.73 0.33 -0.33
6 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 -0.72 0.3 -0.31
7 AT1G17730 vacuolar protein sorting 46.1 CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1B, vacuolar protein
sorting 46.1		 0.72 0.32 -0.33
8 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.33 -0.3
9 AT5G58020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF602 (InterPro:IPR006735); Has 385 Blast
hits to 385 proteins in 189 species: Archae - 0; Bacteria -
0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0;
Other Eukaryotes - 65 (source: NCBI BLink).		 0.72 0.31 -0.32
10 AT5G39510 Vesicle transport v-SNARE family protein VESICLE TRANSPORT V-SNARE 11,
ATVTI1A, SHOOT GRAVITROPSIM 4,
VESICLE TRANSPORT V-SNARE 11,
VTI1A, ZIG, ZIG1		 0.72 0.33 -0.3
11 AT1G69440 Argonaute family protein ARGONAUTE7, ZIPPY -0.72 0.33 -0.33
12 AT5G17640 Protein of unknown function (DUF1005) 0.71 0.31 -0.31
13 AT4G29230 NAC domain containing protein 75 NAC domain containing protein 75,
NAC domain containing protein 75		 0.71 0.33 -0.31
14 AT3G05500 Rubber elongation factor protein (REF) 0.71 0.31 -0.32
15 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein 0.71 0.31 -0.3
16 AT3G29200 chorismate mutase 1 ARABIDOPSIS THALIANA CHORISMATE
MUTASE 1, chorismate mutase 1		 0.71 0.3 -0.31
17 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 0.71 0.3 -0.32
18 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B 0.71 0.33 -0.32
19 AT1G07420 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol
4-alpha-methyl oxidase 1, sterol
4-alpha-methyl-oxidase 2-1		 0.7 0.33 -0.34
20 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.7 0.31 -0.32
21 AT1G64550 general control non-repressible 3 ATP-binding cassette F3, AtABCF3,
AtGCN20, general control
non-repressible 3, general control
non-repressible 20, general
control non-repressible 3,
susceptible to
coronatine-deficient Pst DC3000 5		 0.69 0.3 -0.31
22 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 0.69 0.32 -0.29
23 AT2G23200 Protein kinase superfamily protein -0.69 0.31 -0.31
24 AT1G09150 pseudouridine synthase and archaeosine transglycosylase
(PUA) domain-containing protein		 0.69 0.32 -0.33
25 AT1G50970 Membrane trafficking VPS53 family protein -0.68 0.35 -0.31
26 AT4G05340 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.34 -0.33
27 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.68 0.31 -0.3
28 AT4G21110 G10 family protein 0.68 0.31 -0.32
29 AT5G62640 proline-rich family protein AtELF5, EARLY FLOWERING 5 0.68 0.33 -0.33
30 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.31
31 AT4G23040 Ubiquitin-like superfamily protein 0.67 0.31 -0.3
32 AT5G42000 ORMDL family protein 0.67 0.3 -0.3
33 AT3G52080 cation/hydrogen exchanger 28 cation/hydrogen exchanger 28 -0.67 0.32 -0.29
34 AT1G79050 recA DNA recombination family protein 0.67 0.32 -0.32
35 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 -0.66 0.3 -0.34
36 AT3G60250 casein kinase II beta chain 3 casein kinase II beta chain 3 0.66 0.31 -0.3
37 AT2G10970 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.66 0.33 -0.32
38 AT5G24400 NagB/RpiA/CoA transferase-like superfamily protein EMBRYO DEFECTIVE 2024,
6-PHOSPHOGLUCONOLACTONASE 3		 0.66 0.32 -0.31
39 AT4G12790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.32 -0.32
40 AT1G12280 LRR and NB-ARC domains-containing disease resistance
protein		 -0.66 0.32 -0.32
41 AT1G60670 Protein of unknown function (DUF3755) 0.65 0.3 -0.3
42 AT1G22540 Major facilitator superfamily protein -0.65 0.31 -0.32
43 AT5G14240 Thioredoxin superfamily protein 0.65 0.32 -0.29
44 AT2G12300 transposable element gene -0.65 0.3 -0.32
45 AT3G28490 Oxoglutarate/iron-dependent oxygenase 0.65 0.31 -0.3
46 AT1G65370 TRAF-like family protein -0.65 0.33 -0.32
47 AT3G57390 AGAMOUS-like 18 AGAMOUS-like 18 0.64 0.31 -0.33
48 AT1G12120 Plant protein of unknown function (DUF863) 0.64 0.33 -0.33
49 AT1G51500 ABC-2 type transporter family protein ATP-binding cassette G12,
AtABCG12, ARABIDOPSIS THALIANA
WHITE-BROWN COMPLEX 12, ECERIFERUM
5, D3, WHITE-BROWN COMPLEX 12		 -0.64 0.3 -0.32
50 AT3G16060 ATP binding microtubule motor family protein -0.64 0.3 -0.3
51 AT4G19740 Glycosyl hydrolase superfamily protein -0.63 0.33 -0.32
52 AT3G04200 RmlC-like cupins superfamily protein -0.63 0.33 -0.31
53 AT3G12570 FYD FYD 0.63 0.31 -0.31
54 AT5G14530 Transducin/WD40 repeat-like superfamily protein 0.63 0.34 -0.31
55 AT3G15970 NUP50 (Nucleoporin 50 kDa) protein 0.63 0.32 -0.31
56 AT1G35860 translocon outer membrane complex 75-I translocon outer membrane complex
75-I		 -0.62 0.34 -0.33
57 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 -0.62 0.34 -0.32
58 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.62 0.33 -0.33
59 AT3G28120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.62 0.33 -0.3
60 AT2G13430 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.32
61 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.31 -0.31
62 AT5G06265 hyaluronan mediated motility receptor-related -0.61 0.31 -0.3
63 AT1G61240 Protein of unknown function (DUF707) -0.61 0.32 -0.31
64 AT1G28375 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.6 0.33 -0.3
65 AT4G13150 unknown protein; Has 83 Blast hits to 82 proteins in 37
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.32 -0.33
66 AT3G60790 F-box family protein -0.6 0.31 -0.32
67 AT1G64270 transposable element gene -0.6 0.31 -0.32
68 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 -0.6 0.33 -0.31
69 AT4G13450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.59 0.31 -0.32
70 AT1G24000 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.59 0.32 -0.31
71 AT4G30050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.33 -0.31
72 AT3G51590 lipid transfer protein 12 lipid transfer protein 12 -0.59 0.34 -0.3
73 AT1G67050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits
to 318 proteins in 80 species: Archae - 0; Bacteria - 16;
Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other
Eukaryotes - 268 (source: NCBI BLink).		 -0.59 0.32 -0.33
74 AT5G26190 Cysteine/Histidine-rich C1 domain family protein -0.59 0.33 -0.3
75 AT1G69100 Eukaryotic aspartyl protease family protein -0.58 0.33 -0.29
76 AT1G44740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower,
seed; EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 8 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.34 -0.31
77 AT1G74440 Protein of unknown function (DUF962) -0.58 0.31 -0.33
78 AT1G11990 O-fucosyltransferase family protein -0.57 0.34 -0.32
79 AT1G36550 transposable element gene -0.57 0.31 -0.32
80 AT5G35450 Disease resistance protein (CC-NBS-LRR class) family -0.56 0.3 -0.31
81 AT3G26880 Plant self-incompatibility protein S1 family -0.56 0.31 -0.32
82 AT2G26630 transposable element gene -0.56 0.3 -0.3
83 AT3G53550 FBD-like domain family protein -0.56 0.32 -0.32
84 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.3 -0.33
85 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.72 0.41 -0.43 C0038
87 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.72 0.48 -0.45 C0033