AT4G36810 : geranylgeranyl pyrophosphate synthase 1
Query Information
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AGICode AT4G36810
Description geranylgeranyl pyrophosphate synthase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G36810 geranylgeranyl pyrophosphate synthase 1 geranylgeranyl pyrophosphate
synthase 1		 1 0.3 -0.31
2 AT5G09480 hydroxyproline-rich glycoprotein family protein -0.85 0.33 -0.32
3 AT1G56320 BEST Arabidopsis thaliana protein match is: Glycine-rich
protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.82 0.32 -0.3
4 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.8 0.33 -0.32
5 AT3G18400 NAC domain containing protein 58 NAC domain containing protein 58,
NAC domain containing protein 58		 -0.8 0.31 -0.32
6 AT4G21860 methionine sulfoxide reductase B 2 methionine sulfoxide reductase B 2 0.8 0.3 -0.32
7 AT2G15290 translocon at inner membrane of chloroplasts 21 TRANSLOCON AT INNER MEMBRANE OF
CHLOROPLASTS 21, CHLOROPLAST
IMPORT APPARATUS 5, PERMEASE IN
CHLOROPLASTS 1, translocon at
inner membrane of chloroplasts 21		 0.8 0.31 -0.33
8 AT2G03200 Eukaryotic aspartyl protease family protein -0.8 0.32 -0.32
9 AT2G18980 Peroxidase superfamily protein -0.79 0.32 -0.3
10 AT4G20390 Uncharacterised protein family (UPF0497) -0.78 0.28 -0.31
11 AT5G37690 SGNH hydrolase-type esterase superfamily protein -0.78 0.29 -0.3
12 AT2G48140 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 embryo sac development arrest 4 -0.78 0.31 -0.31
13 AT3G24240 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.77 0.3 -0.3
14 AT1G74460 GDSL-like Lipase/Acylhydrolase superfamily protein -0.77 0.3 -0.32
15 AT1G27700 Syntaxin/t-SNARE family protein 0.76 0.33 -0.33
16 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 -0.76 0.3 -0.31
17 AT5G13120 cyclophilin 20-2 ARABIDOPSIS THALIANA CYCLOPHILIN
20-2, cyclophilin 20-2,
Photosynthetic NDH subcomplex L 5		 0.75 0.3 -0.3
18 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.75 0.3 -0.31
19 AT1G05260 Peroxidase superfamily protein RARE COLD INDUCIBLE GENE 3, RCI3A -0.75 0.32 -0.31
20 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.75 0.29 -0.3
21 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.75 0.31 -0.35
22 AT5G58860 cytochrome P450, family 86, subfamily A, polypeptide 1 CYP86, cytochrome P450, family 86,
subfamily A, polypeptide 1		 -0.75 0.32 -0.31
23 AT1G60060 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 0.74 0.3 -0.31
24 AT2G23540 GDSL-like Lipase/Acylhydrolase superfamily protein -0.74 0.33 -0.32
25 AT2G30210 laccase 3 laccase 3 -0.74 0.32 -0.34
26 AT3G53510 ABC-2 type transporter family protein ATP-binding cassette G20 -0.74 0.33 -0.29
27 AT3G57950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast
hits to 81 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.3 -0.3
28 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.74 0.32 -0.32
29 AT4G38080 hydroxyproline-rich glycoprotein family protein -0.74 0.31 -0.31
30 AT5G09520 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.73 0.32 -0.31
31 AT5G19410 ABC-2 type transporter family protein ATP-binding cassette G23 -0.73 0.29 -0.3
32 AT5G51590 AT hook motif DNA-binding family protein -0.73 0.33 -0.32
33 AT1G71870 MATE efflux family protein -0.73 0.28 -0.31
34 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.32 -0.35
35 AT5G45210 Disease resistance protein (TIR-NBS-LRR class) family -0.73 0.32 -0.31
36 AT5G49880 mitotic checkpoint family protein -0.73 0.31 -0.32
37 AT3G28920 homeobox protein 34 homeobox protein 34, homeobox
protein 34, ZINC FINGER
HOMEODOMAIN 9		 0.73 0.32 -0.32
38 AT2G28670 Disease resistance-responsive (dirigent-like protein)
family protein		 ENHANCED SUBERIN 1 -0.73 0.32 -0.31
39 AT1G02560 nuclear encoded CLP protease 5 nuclear encoded CLP protease 5,
NUCLEAR-ENCODED CLPP 1, NUCLEAR
CLPP 5		 0.72 0.32 -0.31
40 AT4G36610 alpha/beta-Hydrolases superfamily protein -0.72 0.3 -0.31
41 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 -0.72 0.31 -0.31
42 AT3G48410 alpha/beta-Hydrolases superfamily protein -0.72 0.3 -0.31
43 AT4G16490 ARM repeat superfamily protein 0.72 0.32 -0.31
44 AT5G49940 NIFU-like protein 2 CHLOROPLAST-LOCALIZED NIFU-LIKE
PROTEIN 2, NIFU-like protein 2		 0.71 0.33 -0.29
45 AT4G17215 Pollen Ole e 1 allergen and extensin family protein -0.71 0.32 -0.32
46 AT5G13900 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.71 0.34 -0.32
47 AT5G48940 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.71 0.32 -0.33
48 AT3G04570 AT-hook motif nuclear-localized protein 19 AT-hook motif nuclear-localized
protein 19		 -0.71 0.32 -0.31
49 AT3G55920 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.71 0.32 -0.31
50 AT5G23440 ferredoxin/thioredoxin reductase subunit A (variable
subunit) 1		 ferredoxin/thioredoxin reductase
subunit A (variable subunit) 1		 0.71 0.34 -0.31
51 AT2G04480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits
to 38 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.32 -0.31
52 AT2G31670 Stress responsive alpha-beta barrel domain protein 0.71 0.31 -0.3
53 AT5G41040 HXXXD-type acyl-transferase family protein -0.71 0.32 -0.31
54 AT2G32300 uclacyanin 1 uclacyanin 1 -0.71 0.31 -0.34
55 AT1G34670 myb domain protein 93 myb domain protein 93, myb domain
protein 93		 -0.71 0.33 -0.29
56 AT5G38030 MATE efflux family protein -0.7 0.31 -0.32
57 AT1G09380 nodulin MtN21 /EamA-like transporter family protein -0.7 0.3 -0.29
58 AT3G21770 Peroxidase superfamily protein -0.7 0.31 -0.31
59 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1		 -0.7 0.3 -0.34
60 AT2G43950 chloroplast outer envelope protein 37 ARABIDOPSIS CHLOROPLAST OUTER
ENVELOPE PROTEIN 37, chloroplast
outer envelope protein 37		 0.7 0.31 -0.31
61 AT3G44540 fatty acid reductase 4 fatty acid reductase 4 -0.7 0.29 -0.31
62 AT4G38020 tRNA/rRNA methyltransferase (SpoU) family protein 0.7 0.34 -0.31
63 AT3G53560 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.32 -0.31
64 AT1G21740 Protein of unknown function (DUF630 and DUF632) -0.69 0.3 -0.29
65 AT3G26550 Cysteine/Histidine-rich C1 domain family protein -0.69 0.3 -0.31
66 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.69 0.32 -0.33
67 AT1G79580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 33, SOMBRERO		 -0.69 0.3 -0.32
68 AT1G32500 non-intrinsic ABC protein 6 ATP-binding cassette I7,
non-intrinsic ABC protein 6,
non-intrinsic ABC protein 6		 0.69 0.31 -0.32
69 AT2G35380 Peroxidase superfamily protein -0.69 0.29 -0.33
70 AT1G28130 Auxin-responsive GH3 family protein GH3.17 -0.69 0.32 -0.3
71 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 0.69 0.32 -0.33
72 AT4G26500 chloroplast sulfur E ARABIDOPSIS THALIANA SULFUR E,
chloroplast sulfur E, MBRYO
DEFECTIVE 1374, SULFUR E 1		 0.69 0.33 -0.31
73 AT1G31950 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.69 0.32 -0.32
74 AT5G15440 EID1-like 1 EID1-like 1 0.69 0.31 -0.32
75 AT5G14020 Endosomal targeting BRO1-like domain-containing protein -0.69 0.32 -0.33
76 AT1G53830 pectin methylesterase 2 pectin methylesterase 2, pectin
methylesterase 2		 -0.68 0.3 -0.33
77 AT2G22920 serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 -0.68 0.33 -0.32
78 AT1G65410 non-intrinsic ABC protein 11 ATP-binding cassette I13,
non-intrinsic ABC protein 11,
non-intrinsic ABC protein 11,
TRIGALACTOSYLDIACYLGLYCEROL 3		 0.68 0.34 -0.31
79 AT3G06390 Uncharacterised protein family (UPF0497) -0.68 0.31 -0.32
80 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 0.68 0.32 -0.32
81 AT1G15210 pleiotropic drug resistance 7 ATP-binding cassette G35,
PLEIOTROPIC DRUG RESISTANCE 7,
pleiotropic drug resistance 7		 -0.68 0.3 -0.31
82 AT1G48510 Surfeit locus 1 cytochrome c oxidase biogenesis protein -0.68 0.31 -0.31
83 AT3G10850 Metallo-hydrolase/oxidoreductase superfamily protein GLYOXALASE 2-2, GLY2 0.68 0.32 -0.29
84 AT1G08490 chloroplastic NIFS-like cysteine desulfurase ATCPNIFS, ATNFS2, ATSUFS,
chloroplastic NIFS-like cysteine
desulfurase, SUFS		 0.68 0.31 -0.28
85 AT2G36250 Tubulin/FtsZ family protein ATFTSZ2-1, FTSZ2-1 0.68 0.32 -0.32
86 AT4G25130 peptide met sulfoxide reductase 4 peptide met sulfoxide reductase 4 0.68 0.35 -0.3
87 AT3G46010 actin depolymerizing factor 1 actin depolymerizing factor 1,
atadf, ATADF1		 0.68 0.3 -0.29
88 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 -0.68 0.29 -0.36
89 AT2G42130 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.68 0.3 -0.33
90 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B 0.67 0.31 -0.32
91 AT3G52340 sucrose-6F-phosphate phosphohydrolase 2 SUCROSE-PHOSPHATASE 2,
sucrose-6F-phosphate
phosphohydrolase 2		 0.67 0.31 -0.32
92 AT2G47200 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.32 -0.31
93 AT2G37920 copper ion transmembrane transporters embryo defective 1513 0.67 0.33 -0.31
94 AT1G52150 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-15, ATHB15, CORONA, INCURVATA
4		 -0.67 0.31 -0.34
95 AT5G49350 Glycine-rich protein family -0.67 0.3 -0.3
96 AT2G45430 AT-hook motif nuclear-localized protein 22 AT-hook motif nuclear-localized
protein 22		 -0.67 0.33 -0.32
97 AT3G02570 Mannose-6-phosphate isomerase, type I MATERNAL EFFECT EMBRYO ARREST 31,
PHOSPHOMANNOSE ISOMERASE 1		 0.67 0.3 -0.31
98 AT1G68850 Peroxidase superfamily protein -0.67 0.33 -0.3
99 AT1G12160 Flavin-binding monooxygenase family protein -0.67 0.33 -0.31
100 AT2G32620 cellulose synthase-like B cellulose synthase-like B,
CELLULOSE SYNTHASE LIKE B2,
CELLULOSE SYNTHASE LIKE B2,
cellulose synthase-like B		 -0.67 0.34 -0.3
101 AT1G18980 RmlC-like cupins superfamily protein -0.67 0.31 -0.29
102 AT3G09310 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast
hits to 5781 proteins in 1903 species: Archae - 0; Bacteria
- 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3;
Other Eukaryotes - 1778 (source: NCBI BLink).		 0.67 0.31 -0.31
103 AT1G75520 SHI-related sequence 5 SHI-related sequence 5 -0.67 0.32 -0.3
104 AT1G44970 Peroxidase superfamily protein -0.66 0.33 -0.32
105 AT5G53090 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.33 -0.31
106 AT2G21100 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.66 0.31 -0.32
107 AT1G74110 cytochrome P450, family 78, subfamily A, polypeptide 10 cytochrome P450, family 78,
subfamily A, polypeptide 10		 -0.66 0.31 -0.32
108 AT5G54540 Uncharacterised conserved protein (UCP012943) 0.66 0.32 -0.3
109 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 -0.66 0.32 -0.31
110 AT1G53230 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
3		 TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 3		 0.66 0.31 -0.31
111 AT5G25510 Protein phosphatase 2A regulatory B subunit family protein 0.66 0.33 -0.33
112 AT1G30910 Molybdenum cofactor sulfurase family protein 0.65 0.33 -0.33
113 AT2G03680 spiral1 SKU6, SPIRAL1 0.65 0.31 -0.31
114 AT3G11430 glycerol-3-phosphate acyltransferase 5 GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 5,
glycerol-3-phosphate
acyltransferase 5		 -0.65 0.31 -0.32
115 AT4G37410 cytochrome P450, family 81, subfamily F, polypeptide 4 cytochrome P450, family 81,
subfamily F, polypeptide 4		 -0.65 0.31 -0.33
116 AT3G06470 GNS1/SUR4 membrane protein family 0.65 0.33 -0.3
117 AT4G37650 GRAS family transcription factor SHOOT GRAVITROPISM 7, SHORT ROOT -0.65 0.32 -0.31
118 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 -0.65 0.31 -0.32
119 AT5G28300 Duplicated homeodomain-like superfamily protein 0.65 0.3 -0.33
120 AT3G18420 Protein prenylyltransferase superfamily protein 0.65 0.31 -0.31
121 AT4G21600 endonuclease 5 endonuclease 5 -0.65 0.33 -0.31
122 AT1G30750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: hypocotyl, root, pollen
tube; Has 1177 Blast hits to 607 proteins in 189 species:
Archae - 0; Bacteria - 312; Metazoa - 195; Fungi - 185;
Plants - 27; Viruses - 16; Other Eukaryotes - 442 (source:
NCBI BLink).		 -0.65 0.32 -0.34
123 AT1G18880 Major facilitator superfamily protein nitrate transporter 1.9 -0.65 0.32 -0.31
124 AT1G47670 Transmembrane amino acid transporter family protein -0.65 0.34 -0.31
125 AT5G44550 Uncharacterised protein family (UPF0497) -0.65 0.32 -0.31
126 AT5G42180 Peroxidase superfamily protein peroxidase 64 -0.65 0.33 -0.32
127 AT5G05960 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.31 -0.31
128 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein 0.64 0.33 -0.32
129 AT1G67030 zinc finger protein 6 zinc finger protein 6 -0.64 0.31 -0.33
130 AT2G19310 HSP20-like chaperones superfamily protein 0.64 0.33 -0.34
131 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.64 0.32 -0.3
132 AT3G16440 myrosinase-binding protein-like protein-300B myrosinase-binding protein-like
protein-300B, maternal effect
embryo arrest 36,
myrosinase-binding protein-like
protein-300B		 -0.64 0.31 -0.3
133 AT3G48070 RING/U-box superfamily protein 0.64 0.29 -0.32
134 AT4G29120 6-phosphogluconate dehydrogenase family protein 0.64 0.32 -0.32
135 AT4G36910 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 1,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 2, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 2		 0.64 0.32 -0.31
136 AT1G10310 NAD(P)-binding Rossmann-fold superfamily protein 0.64 0.32 -0.31
137 AT3G61440 cysteine synthase C1 BETA-SUBSTITUTED ALA SYNTHASE 3;1,
CYSTEINE SYNTHASE C1, cysteine
synthase C1		 0.64 0.3 -0.31
138 AT2G36290 alpha/beta-Hydrolases superfamily protein -0.64 0.32 -0.31
139 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.64 0.31 -0.31
140 AT2G23050 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 4, NAKED PINS
IN YUC MUTANTS 4		 -0.63 0.31 -0.32
141 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.63 0.32 -0.28
142 AT3G57010 Calcium-dependent phosphotriesterase superfamily protein -0.63 0.31 -0.31
143 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 -0.63 0.33 -0.3
144 AT5G65780 branched-chain amino acid aminotransferase 5 /
branched-chain amino acid transaminase 5 (BCAT5)		 ATBCAT-5 0.63 0.32 -0.32
145 AT5G67280 receptor-like kinase receptor-like kinase 0.63 0.31 -0.33
146 AT2G36460 Aldolase superfamily protein 0.63 0.31 -0.29
147 AT4G28890 RING/U-box superfamily protein -0.63 0.33 -0.32
148 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.63 0.32 -0.3
149 AT3G50400 GDSL-like Lipase/Acylhydrolase superfamily protein -0.63 0.32 -0.32
150 AT5G14750 myb domain protein 66 myb domain protein 66, myb domain
protein 66, WEREWOLF, WEREWOLF 1		 -0.63 0.31 -0.31
151 AT5G50020 DHHC-type zinc finger family protein 0.63 0.33 -0.33
152 AT4G13580 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.63 0.31 -0.32
153 AT5G63860 Regulator of chromosome condensation (RCC1) family protein UVB-RESISTANCE 8 0.63 0.31 -0.31
154 AT5G06800 myb-like HTH transcriptional regulator family protein -0.63 0.34 -0.32
155 AT5G10510 AINTEGUMENTA-like 6 AINTEGUMENTA-like 6, PLETHORA 3 -0.63 0.31 -0.32
156 AT4G17280 Auxin-responsive family protein -0.63 0.32 -0.32
157 AT3G28840 Protein of unknown function (DUF1216) 0.63 0.31 -0.32
158 AT4G31780 monogalactosyl diacylglycerol synthase 1 EMBRYO DEFECTIVE 2797,
monogalactosyl diacylglycerol
synthase 1,
MONOGALACTOSYLDIACYLGLYCEROL
SYNTHASE A, UDP-glycosyl
transferase 81A1		 0.62 0.31 -0.3
159 AT1G74940 Protein of unknown function (DUF581) 0.62 0.3 -0.29
160 AT5G49230 Drought-responsive family protein HYPERSENSITIVE TO RED AND BLUE 0.62 0.32 -0.31
161 AT5G59610 Chaperone DnaJ-domain superfamily protein 0.62 0.3 -0.31