AGICode | AT4G37210 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G37210 | Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | 0.32 | -0.32 | |||
2 | AT5G56740 | histone acetyltransferase of the GNAT family 2 | HAC07, HAC7, HAG02, histone acetyltransferase of the GNAT family 2 |
0.82 | 0.32 | -0.33 | ||
3 | AT3G62010 | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 553 Blast hits to 216 proteins in 93 species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi - 58; Plants - 108; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). |
-0.79 | 0.33 | -0.27 | |||
4 | AT1G77420 | alpha/beta-Hydrolases superfamily protein | -0.77 | 0.32 | -0.31 | |||
5 | AT3G14920 | Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein |
-0.77 | 0.3 | -0.33 | |||
6 | AT1G75990 | PAM domain (PCI/PINT associated module) protein | 0.77 | 0.31 | -0.3 | |||
7 | AT1G04440 | casein kinase like 13 | casein kinase like 13 | -0.76 | 0.31 | -0.32 | ||
8 | AT5G41600 | VIRB2-interacting protein 3 | VIRB2-interacting protein 3, Reticulan like protein B4 |
0.76 | 0.33 | -0.3 | ||
9 | AT5G27350 | Major facilitator superfamily protein | SFP1 | -0.75 | 0.32 | -0.29 | ||
10 | AT4G28440 | Nucleic acid-binding, OB-fold-like protein | 0.75 | 0.32 | -0.34 | |||
11 | AT5G13760 | Plasma-membrane choline transporter family protein | -0.75 | 0.31 | -0.32 | |||
12 | AT3G58690 | Protein kinase superfamily protein | 0.75 | 0.32 | -0.32 | |||
13 | AT3G20240 | Mitochondrial substrate carrier family protein | 0.75 | 0.31 | -0.32 | |||
14 | AT1G18330 | Homeodomain-like superfamily protein | EARLY-PHYTOCHROME-RESPONSIVE1, REVEILLE 7 |
0.75 | 0.31 | -0.32 | ||
15 | AT4G35750 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
-0.74 | 0.31 | -0.34 | |||
16 | AT5G11150 | vesicle-associated membrane protein 713 | vesicle-associated membrane protein 713, VAMP713, vesicle-associated membrane protein 713 |
0.74 | 0.32 | -0.32 | ||
17 | AT4G28990 | RNA-binding protein-related | 0.73 | 0.3 | -0.34 | |||
18 | AT1G17130 | Family of unknown function (DUF572) | 0.73 | 0.31 | -0.33 | |||
19 | AT4G20890 | tubulin beta-9 chain | tubulin beta-9 chain | 0.73 | 0.31 | -0.31 | ||
20 | AT1G53280 | Class I glutamine amidotransferase-like superfamily protein | DJ-1 homolog B, DJ-1 homolog B | -0.73 | 0.31 | -0.31 | ||
21 | AT1G53560 | Ribosomal protein L18ae family | -0.73 | 0.31 | -0.3 | |||
22 | AT3G53500 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain |
arginine/serine-rich zinc knuckle-containing protein 32, arginine/serine-rich zinc knuckle-containing protein 32, arginine/serine-rich zinc knuckle-containing protein 32 |
0.73 | 0.3 | -0.31 | ||
23 | AT2G41480 | Peroxidase superfamily protein | -0.72 | 0.31 | -0.32 | |||
24 | AT4G28320 | Glycosyl hydrolase superfamily protein | AtMAN5, endo-beta-mannase 5 | 0.72 | 0.3 | -0.29 | ||
25 | AT3G11230 | Yippee family putative zinc-binding protein | -0.72 | 0.34 | -0.32 | |||
26 | AT4G16130 | arabinose kinase | arabinose kinase, ATISA1, ISA1 | -0.72 | 0.31 | -0.33 | ||
27 | AT1G36310 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.71 | 0.31 | -0.31 | |||
28 | AT5G18440 | CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink). |
AtNUFIP, nuclear FMRP-interacting protein |
0.71 | 0.35 | -0.31 | ||
29 | AT2G37560 | origin recognition complex second largest subunit 2 | ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2, origin recognition complex second largest subunit 2 |
0.71 | 0.32 | -0.32 | ||
30 | AT3G04470 | Ankyrin repeat family protein | 0.71 | 0.33 | -0.3 | |||
31 | AT5G65120 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.71 | 0.31 | -0.3 | |||
32 | AT1G71710 | DNAse I-like superfamily protein | 0.71 | 0.29 | -0.32 | |||
33 | AT1G75180 | Erythronate-4-phosphate dehydrogenase family protein | 0.7 | 0.32 | -0.34 | |||
34 | AT1G04970 | lipid-binding serum glycoprotein family protein | -0.7 | 0.34 | -0.32 | |||
35 | AT1G53035 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.7 | 0.31 | -0.33 | |||
36 | AT2G31360 | 16:0delta9 desaturase 2 | 16:0delta9 desaturase 2, 16:0delta9 desaturase 2 |
0.7 | 0.31 | -0.31 | ||
37 | AT3G13570 | SC35-like splicing factor 30A | SC35-like splicing factor 30A, SC35-like splicing factor 30A |
0.7 | 0.3 | -0.33 | ||
38 | AT1G67560 | PLAT/LH2 domain-containing lipoxygenase family protein | Arabidopsis thaliana lipoxygenase 6, lipoxygenase 6 |
-0.7 | 0.3 | -0.32 | ||
39 | AT1G18040 | cyclin-dependent kinase D1;3 | CYCLIN-DEPENDENT KINASE D1;3, CAK2AT, cyclin-dependent kinase D1;3 |
0.7 | 0.32 | -0.31 | ||
40 | AT5G06980 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.7 | 0.32 | -0.32 | |||
41 | AT3G28050 | nodulin MtN21 /EamA-like transporter family protein | -0.7 | 0.29 | -0.32 | |||
42 | AT1G51600 | ZIM-LIKE 2 | GATA TRANSCRIPTION FACTOR 28, TIFY2A, ZIM-LIKE 2 |
0.7 | 0.3 | -0.32 | ||
43 | AT4G15415 | Protein phosphatase 2A regulatory B subunit family protein | ATB' GAMMA | 0.7 | 0.31 | -0.32 | ||
44 | AT2G28720 | Histone superfamily protein | 0.7 | 0.31 | -0.33 | |||
45 | AT2G02880 | mucin-related | 0.7 | 0.31 | -0.34 | |||
46 | AT1G15660 | centromere protein C | CENP-C HOMOLOGUE, centromere protein C |
0.69 | 0.34 | -0.3 | ||
47 | AT1G17340 | Phosphoinositide phosphatase family protein | -0.69 | 0.31 | -0.31 | |||
48 | AT2G32080 | purin-rich alpha 1 | purin-rich alpha 1 | -0.69 | 0.32 | -0.34 | ||
49 | AT2G40780 | Nucleic acid-binding, OB-fold-like protein | 0.69 | 0.3 | -0.32 | |||
50 | AT1G56700 | Peptidase C15, pyroglutamyl peptidase I-like | -0.69 | 0.32 | -0.31 | |||
51 | AT1G07360 | CCCH-type zinc fingerfamily protein with RNA-binding domain | MOS4-associated complex subunit 5A | 0.69 | 0.32 | -0.3 | ||
52 | AT1G32860 | Glycosyl hydrolase superfamily protein | 0.69 | 0.31 | -0.3 | |||
53 | AT5G07860 | HXXXD-type acyl-transferase family protein | -0.68 | 0.31 | -0.3 | |||
54 | AT5G66750 | chromatin remodeling 1 | ATDDM1, CHA1, CHROMATIN REMODELING 1, chromatin remodeling 1, DECREASED DNA METHYLATION 1, SOMNIFEROUS 1, SOM4 |
0.68 | 0.28 | -0.3 | ||
55 | AT5G45400 | Replication factor-A protein 1-related | ATRPA70C, RPA70C | 0.68 | 0.32 | -0.31 | ||
56 | AT1G55850 | cellulose synthase like E1 | ATCSLE1, cellulose synthase like E1 |
-0.68 | 0.33 | -0.31 | ||
57 | AT2G28380 | dsRNA-binding protein 2 | dsRNA-binding protein 2 | 0.68 | 0.31 | -0.31 | ||
58 | AT5G55760 | sirtuin 1 | sirtuin 1 | 0.68 | 0.32 | -0.32 | ||
59 | AT1G78650 | DNA-directed DNA polymerases | POLD3 | 0.67 | 0.31 | -0.3 | ||
60 | AT3G14890 | phosphoesterase | 0.67 | 0.32 | -0.34 | |||
61 | AT2G17560 | high mobility group B4 | high mobility group B4, NFD04, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D4 |
0.67 | 0.33 | -0.32 | ||
62 | AT3G23200 | Uncharacterised protein family (UPF0497) | -0.67 | 0.32 | -0.31 | |||
63 | AT1G03420 | transposable element gene | sadhu non-coding retrotransposon 4-2 |
0.67 | 0.31 | -0.33 | ||
64 | AT5G49220 | Protein of unknown function (DUF789) | 0.67 | 0.32 | -0.31 | |||
65 | AT5G56020 | Got1/Sft2-like vescicle transport protein family | -0.67 | 0.31 | -0.31 | |||
66 | AT1G01490 | Heavy metal transport/detoxification superfamily protein | -0.67 | 0.33 | -0.29 | |||
67 | AT4G35310 | calmodulin-domain protein kinase 5 | ATCPK5, calmodulin-domain protein kinase 5 |
0.66 | 0.33 | -0.31 | ||
68 | AT3G05660 | receptor like protein 33 | receptor like protein 33, receptor like protein 33 |
0.66 | 0.3 | -0.32 | ||
69 | AT1G09350 | galactinol synthase 3 | galactinol synthase 3, galactinol synthase 3 |
0.66 | 0.32 | -0.3 | ||
70 | AT1G80950 | Phospholipid/glycerol acyltransferase family protein | -0.66 | 0.32 | -0.3 | |||
71 | AT1G55090 | carbon-nitrogen hydrolase family protein | -0.66 | 0.3 | -0.3 | |||
72 | AT2G38730 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.66 | 0.33 | -0.32 | |||
73 | AT3G12280 | retinoblastoma-related 1 | RETINOBLASTOMA-RELATED PROTEIN 1, RB, RETINOBLASTOMA 1, RETINOBLASTOMA-RELATED, retinoblastoma-related 1 |
0.66 | 0.31 | -0.34 | ||
74 | AT1G48580 | unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.66 | 0.33 | -0.31 | |||
75 | AT1G64530 | Plant regulator RWP-RK family protein | 0.66 | 0.28 | -0.33 | |||
76 | AT2G04940 | scramblase-related | -0.66 | 0.3 | -0.3 | |||
77 | AT1G62010 | Mitochondrial transcription termination factor family protein |
0.66 | 0.32 | -0.34 | |||
78 | AT1G60560 | SWIM zinc finger family protein | 0.65 | 0.31 | -0.31 | |||
79 | AT3G01360 | Family of unknown function (DUF716) | -0.65 | 0.31 | -0.33 | |||
80 | AT5G63380 | AMP-dependent synthetase and ligase family protein | 0.65 | 0.3 | -0.32 | |||
81 | AT5G23810 | amino acid permease 7 | amino acid permease 7 | -0.65 | 0.31 | -0.31 | ||
82 | AT4G17090 | chloroplast beta-amylase | BETA-AMYLASE 3, BETA-AMYLASE 8, chloroplast beta-amylase |
0.65 | 0.31 | -0.33 | ||
83 | AT3G19650 | cyclin-related | 0.65 | 0.33 | -0.31 | |||
84 | AT4G38580 | farnesylated protein 6 | farnesylated protein 6, farnesylated protein 6, HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 |
0.65 | 0.33 | -0.31 | ||
85 | AT1G19860 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.65 | 0.33 | -0.31 | |||
86 | AT3G05675 | BTB/POZ domain-containing protein | 0.65 | 0.33 | -0.31 | |||
87 | AT1G78490 | cytochrome P450, family 708, subfamily A, polypeptide 3 | cytochrome P450, family 708, subfamily A, polypeptide 3 |
-0.64 | 0.32 | -0.3 | ||
88 | AT2G42490 | Copper amine oxidase family protein | -0.64 | 0.32 | -0.3 | |||
89 | AT1G01770 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). |
-0.64 | 0.3 | -0.34 | |||
90 | AT4G16770 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.63 | 0.3 | -0.32 | |||
91 | AT1G28320 | protease-related | DEG15 | -0.63 | 0.33 | -0.31 | ||
92 | AT4G35070 | SBP (S-ribonuclease binding protein) family protein | -0.63 | 0.29 | -0.31 | |||
93 | AT1G03030 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.63 | 0.31 | -0.34 | |||
94 | AT5G11850 | Protein kinase superfamily protein | -0.62 | 0.32 | -0.32 | |||
95 | AT3G63080 | glutathione peroxidase 5 | glutathione peroxidase 5, glutathione peroxidase 5, maternal effect embryo arrest 42 |
-0.61 | 0.34 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
96 | C0221 | Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside | Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside | - | quercetin glucoside biosynthesis (Arabidopsis) | -0.65 | 0.46 | -0.46 |