AT4G37200 : HIGH CHLOROPHYLL FLUORESCENCE 164
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G37200
Description Thioredoxin superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G37200 Thioredoxin superfamily protein HIGH CHLOROPHYLL FLUORESCENCE 164 1 0.29 -0.3
2 AT1G68830 STT7 homolog STN7 STT7 homolog STN7 0.87 0.32 -0.31
3 AT1G69935 short hypocotyl in white light1 SHORT HYPOCOTYL IN WHITE LIGHT1 0.86 0.3 -0.32
4 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.86 0.3 -0.31
5 AT1G31800 cytochrome P450, family 97, subfamily A, polypeptide 3 cytochrome P450, family 97,
subfamily A, polypeptide 3, LUTEIN
DEFICIENT 5		 0.85 0.32 -0.3
6 AT2G33255 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.84 0.32 -0.31
7 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 0.82 0.3 -0.36
8 AT1G31190 myo-inositol monophosphatase like 1 myo-inositol monophosphatase like
1		 0.82 0.3 -0.33
9 AT1G35340 ATP-dependent protease La (LON) domain protein 0.82 0.29 -0.31
10 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.82 0.3 -0.3
11 AT1G77930 Chaperone DnaJ-domain superfamily protein 0.81 0.31 -0.3
12 AT5G18100 copper/zinc superoxide dismutase 3 copper/zinc superoxide dismutase 3 0.81 0.33 -0.32
13 AT4G13200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 97 Blast hits to 97 proteins
in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2;
Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 0.81 0.32 -0.33
14 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.8 0.34 -0.31
15 AT2G01110 Sec-independent periplasmic protein translocase ALBINO AND PALE GREEN 2, PGA2,
TWIN-ARGININE TRANSLOCATION C,
unfertilized embryo sac 3		 0.8 0.33 -0.3
16 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.79 0.3 -0.29
17 AT2G26340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast thylakoid
lumen, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38
proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.79 0.31 -0.32
18 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 0.79 0.31 -0.31
19 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 0.78 0.29 -0.33
20 AT1G32160 Protein of unknown function (DUF760) 0.78 0.3 -0.3
21 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10		 0.78 0.33 -0.31
22 AT5G06130 chaperone protein dnaJ-related 0.78 0.3 -0.32
23 AT3G26085 CAAX amino terminal protease family protein 0.77 0.34 -0.29
24 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.3 -0.31
25 AT5G22620 phosphoglycerate/bisphosphoglycerate mutase family protein 0.77 0.32 -0.33
26 AT5G05200 Protein kinase superfamily protein 0.77 0.32 -0.32
27 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 0.76 0.31 -0.32
28 AT4G28740 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF3493 (InterPro:IPR021883); BEST
Arabidopsis thaliana protein match is: tetratricopeptide
repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.76 0.31 -0.32
29 AT5G03880 Thioredoxin family protein 0.76 0.32 -0.3
30 AT5G16710 dehydroascorbate reductase 1 dehydroascorbate reductase 1 0.76 0.32 -0.31
31 AT1G66330 senescence-associated family protein 0.76 0.32 -0.32
32 AT3G19900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3067 (InterPro:IPR021420);
Has 276 Blast hits to 276 proteins in 83 species: Archae -
0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59;
Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).		 0.76 0.32 -0.32
33 AT5G58330 lactate/malate dehydrogenase family protein 0.76 0.32 -0.3
34 AT3G53470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
Has 35 Blast hits to 35 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.33 -0.32
35 AT2G27290 Protein of unknown function (DUF1279) 0.76 0.31 -0.31
36 AT5G04440 Protein of unknown function (DUF1997) 0.76 0.3 -0.34
37 AT4G32320 ascorbate peroxidase 6 ascorbate peroxidase 6 0.76 0.32 -0.3
38 AT1G04350 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.75 0.31 -0.33
39 AT5G12130 integral membrane TerC family protein TELLURITE RESISTANCE C, PIGMENT
DEFECTIVE 149		 0.75 0.3 -0.32
40 AT2G45740 peroxin 11D peroxin 11D 0.75 0.32 -0.31
41 AT4G33500 Protein phosphatase 2C family protein 0.74 0.33 -0.31
42 AT5G61670 Encodes a close homolog of the Cauliflower OR (Orange)
protein. The function of OR is to induce the
differentiation of proplastids or other noncolored plastids
into chromoplasts for carotenoid accumulation. Both
proteins contain a Cysteine-rich zinc finger domain that is
highly specific to DnaJ-like molecular chaperons.		 0.74 0.3 -0.32
43 AT1G69390 homologue of bacterial MinE 1 accumulation and replication of
chloroplasts 12, homologue of
bacterial MinE 1, homologue of
bacterial MinE 1		 0.74 0.31 -0.34
44 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein 0.74 0.31 -0.3
45 AT5G22830 magnesium (Mg) transporter 10 magnesium (Mg) transporter 10,
GMN10, magnesium (Mg) transporter
10, MAGNESIUM TRANSPORTER 10,
MRS2-11		 0.74 0.34 -0.32
46 AT1G31410 putrescine-binding periplasmic protein-related 0.74 0.31 -0.32
47 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 0.74 0.34 -0.33
48 AT4G27390 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.74 0.33 -0.31
49 AT3G17930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3007
(InterPro:IPR021562); Has 236 Blast hits to 236 proteins in
83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80
(source: NCBI BLink).		 0.74 0.33 -0.33
50 AT1G32070 nuclear shuttle interacting nuclear shuttle interacting,
nuclear shuttle interacting		 0.73 0.31 -0.31
51 AT4G33580 beta carbonic anhydrase 5 A. THALIANA BETA CARBONIC
ANHYDRASE 5, beta carbonic
anhydrase 5		 0.73 0.32 -0.31
52 AT1G33330 Class I peptide chain release factor 0.73 0.33 -0.31
53 AT5G06060 NAD(P)-binding Rossmann-fold superfamily protein 0.73 0.31 -0.31
54 AT3G50790 esterase/lipase/thioesterase family protein 0.73 0.34 -0.32
55 AT1G27385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF493 (InterPro:IPR007454);
Has 76 Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.73 0.31 -0.31
56 AT2G46580 Pyridoxamine 5'-phosphate oxidase family protein 0.73 0.33 -0.32
57 AT4G01940 NFU domain protein 1 AtCNFU1, NFU domain protein 1 0.73 0.27 -0.3
58 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 0.73 0.29 -0.31
59 AT4G19830 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.73 0.33 -0.31
60 AT2G25830 YebC-related 0.73 0.29 -0.31
61 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 0.72 0.31 -0.3
62 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.72 0.33 -0.33
63 AT2G38780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.72 0.28 -0.31
64 AT5G38660 acclimation of photosynthesis to environment ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT		 0.72 0.34 -0.32
65 AT2G03390 uvrB/uvrC motif-containing protein 0.72 0.33 -0.29
66 AT5G43680 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.72 0.32 -0.31
67 AT3G15900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.72 0.33 -0.32
68 AT5G16810 Protein kinase superfamily protein 0.72 0.31 -0.31
69 AT3G29310 calmodulin-binding protein-related -0.72 0.29 -0.3
70 AT2G39690 Protein of unknown function, DUF547 0.71 0.32 -0.33
71 AT1G65410 non-intrinsic ABC protein 11 ATP-binding cassette I13,
non-intrinsic ABC protein 11,
non-intrinsic ABC protein 11,
TRIGALACTOSYLDIACYLGLYCEROL 3		 0.71 0.3 -0.34
72 AT2G46735 unknown protein; Has 14 Blast hits to 14 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.31 -0.3
73 AT3G16175 Thioesterase superfamily protein 0.71 0.3 -0.33
74 AT1G65070 DNA mismatch repair protein MutS, type 2 0.71 0.32 -0.32
75 AT3G23400 Plastid-lipid associated protein PAP / fibrillin family
protein		 fibrillin 4 0.71 0.32 -0.31
76 AT3G09250 Nuclear transport factor 2 (NTF2) family protein 0.71 0.32 -0.32
77 AT5G04900 NYC1-like NYC1-like 0.71 0.32 -0.31
78 AT2G45990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 312
Blast hits to 312 proteins in 90 species: Archae - 0;
Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.71 0.33 -0.33
79 AT3G21760 UDP-Glycosyltransferase superfamily protein HYPOSTATIN RESISTANCE 1 0.71 0.32 -0.33
80 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE -0.7 0.3 -0.33
81 AT4G39550 Galactose oxidase/kelch repeat superfamily protein -0.68 0.32 -0.3
82 AT1G13970 Protein of unknown function (DUF1336) -0.68 0.35 -0.29
83 AT2G28450 zinc finger (CCCH-type) family protein -0.68 0.32 -0.31
84 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 -0.67 0.3 -0.31
85 AT1G05260 Peroxidase superfamily protein RARE COLD INDUCIBLE GENE 3, RCI3A -0.67 0.34 -0.31
86 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 -0.66 0.32 -0.32
87 AT1G30080 Glycosyl hydrolase superfamily protein -0.66 0.33 -0.3
88 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 -0.66 0.33 -0.34
89 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 -0.65 0.32 -0.3
90 AT2G43480 Peroxidase superfamily protein -0.65 0.3 -0.31
91 AT1G53200 unknown protein; Has 21 Blast hits to 21 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.32
92 AT5G02820 Spo11/DNA topoisomerase VI, subunit A protein BRASSINOSTEROID INSENSITIVE 5,
ROOT HAIRLESS 2		 -0.64 0.29 -0.32
93 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.64 0.33 -0.29
94 AT2G23050 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 4, NAKED PINS
IN YUC MUTANTS 4		 -0.63 0.31 -0.31
95 AT1G26660 Prefoldin chaperone subunit family protein -0.63 0.33 -0.31
96 AT2G26480 UDP-glucosyl transferase 76D1 UDP-glucosyl transferase 76D1 -0.61 0.32 -0.31
97 AT5G12970 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 -0.6 0.3 -0.31
98 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.6 0.33 -0.3
99 AT2G45430 AT-hook motif nuclear-localized protein 22 AT-hook motif nuclear-localized
protein 22		 -0.6 0.3 -0.3
100 AT2G23410 cis-prenyltransferase cis-prenyltransferase,
cis-prenyltransferase		 -0.6 0.32 -0.33
101 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.59 0.33 -0.33
102 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.59 0.33 -0.34
103 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein -0.59 0.34 -0.29
104 AT2G25640 SPOC domain / Transcription elongation factor S-II protein -0.59 0.32 -0.31
105 AT5G07190 seed gene 3 seed gene 3 -0.59 0.33 -0.31
106 AT3G20840 Integrase-type DNA-binding superfamily protein PLETHORA 1 -0.59 0.32 -0.29
107 AT2G03880 Pentatricopeptide repeat (PPR) superfamily protein required for efficiency of
mitochondrial editing 1		 -0.58 0.31 -0.3
108 AT1G73160 UDP-Glycosyltransferase superfamily protein -0.58 0.31 -0.31
109 AT5G65390 arabinogalactan protein 7 arabinogalactan protein 7 -0.58 0.33 -0.31
110 AT2G18500 ovate family protein 7 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 7, ovate family protein 7		 -0.58 0.31 -0.33
111 AT2G28360 SIT4 phosphatase-associated family protein -0.58 0.3 -0.33
112 AT5G05960 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.3 -0.29
113 AT4G33160 F-box family protein -0.57 0.32 -0.32
114 AT1G71830 somatic embryogenesis receptor-like kinase 1 SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 1, somatic
embryogenesis receptor-like kinase
1		 -0.57 0.32 -0.32
115 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.31 -0.33
116 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.57 0.3 -0.31
117 AT1G64320 myosin heavy chain-related -0.57 0.33 -0.32
118 AT3G26750 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme
E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits
to 25 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.33
119 AT5G14020 Endosomal targeting BRO1-like domain-containing protein -0.57 0.3 -0.29
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0208 Phosphatidylinositol-34:2 - Phosphatidylinositol-34:2 3-phosphoinositide biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
sphingolipid biosynthesis,
linoleate biosynthesis I,
cutin biosynthesis,
glycerophosphodiester degradation,
phosphate acquisition,
glutathione redox reactions I 		-0.7 0.49 -0.52 C0208
121 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.7 0.51 -0.5 C0199
122 C0081 Digalactosyldiacylglycerol-36:2 - Digalactosyldiacylglycerol-36:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.66 0.48 -0.48 C0081
123 C0238 Sitosterol 3-O-β-D-glucoside - 3-O-β-D-Glucosyl-β-sitosterol sphingolipid biosynthesis -0.63 0.33 -0.34 C0238
124 C0197 Phosphatidylcholine-36:1 - Phosphatidylcholine-36:1 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		-0.6 0.5 -0.52 C0197