AT4G36390 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G36390
Description Methylthiotransferase
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G36390 Methylthiotransferase 1 0.32 -0.31
2 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.92 0.32 -0.31
3 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.92 0.32 -0.32
4 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.91 0.32 -0.33
5 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.9 0.31 -0.34
6 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.9 0.32 -0.3
7 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.9 0.3 -0.3
8 AT1G60230 Radical SAM superfamily protein 0.89 0.35 -0.32
9 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.89 0.32 -0.3
10 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.89 0.31 -0.3
11 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C 0.89 0.32 -0.33
12 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.89 0.34 -0.33
13 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.88 0.31 -0.3
14 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 0.88 0.3 -0.3
15 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.88 0.31 -0.32
16 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.88 0.31 -0.34
17 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.88 0.31 -0.32
18 AT1G79850 ribosomal protein S17 CS17, PIGMENT DEFECTIVE 347,
PLASTID RIBOSOMAL SMALL SUBUNIT
PROTEIN 17, ribosomal protein S17		 0.88 0.32 -0.33
19 AT1G06190 Rho termination factor 0.87 0.31 -0.31
20 AT3G08740 elongation factor P (EF-P) family protein 0.87 0.32 -0.33
21 AT3G21300 RNA methyltransferase family protein 0.87 0.3 -0.32
22 AT5G54600 Translation protein SH3-like family protein 0.87 0.3 -0.31
23 AT2G21860 violaxanthin de-epoxidase-related 0.87 0.32 -0.32
24 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.87 0.32 -0.31
25 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.87 0.31 -0.35
26 AT1G56050 GTP-binding protein-related 0.86 0.31 -0.32
27 AT3G51870 Mitochondrial substrate carrier family protein 0.86 0.33 -0.34
28 AT1G62750 Translation elongation factor EFG/EF2 protein SNOWY COTYLEDON 1, ATSCO1/CPEF-G,
SNOWY COTYLEDON 1		 0.86 0.31 -0.34
29 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.32 -0.31
30 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.86 0.31 -0.33
31 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.86 0.31 -0.31
32 AT5G63050 embryo defective 2759 embryo defective 2759 0.86 0.31 -0.32
33 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.86 0.32 -0.31
34 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.86 0.3 -0.32
35 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 0.86 0.31 -0.32
36 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.86 0.33 -0.31
37 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.85 0.3 -0.32
38 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.85 0.34 -0.32
39 AT4G39120 myo-inositol monophosphatase like 2 HISTIDINE BIOSYNTHESIS 7,
myo-inositol monophosphatase like
2		 0.85 0.3 -0.3
40 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.85 0.32 -0.32
41 AT5G48630 Cyclin family protein 0.85 0.3 -0.32
42 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.85 0.31 -0.31
43 AT1G06950 translocon at the inner envelope membrane of chloroplasts
110		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE INNER ENVELOPE MEMBRANE OF
CHLOROPLASTS 110, translocon at
the inner envelope membrane of
chloroplasts 110		 0.85 0.31 -0.3
44 AT2G14880 SWIB/MDM2 domain superfamily protein 0.85 0.3 -0.32
45 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.85 0.31 -0.32
46 AT3G51140 Protein of unknown function (DUF3353) 0.85 0.3 -0.34
47 AT5G12860 dicarboxylate transporter 1 dicarboxylate transporter 1 0.84 0.31 -0.32
48 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.84 0.31 -0.31
49 AT5G16620 hydroxyproline-rich glycoprotein family protein translocon at the inner envelope
membrane of chloroplasts 40,
pigment defective embryo 120,
translocon at the inner envelope
membrane of chloroplasts 40		 0.84 0.32 -0.31
50 AT3G57560 N-acetyl-l-glutamate kinase N-acetyl-l-glutamate kinase 0.84 0.3 -0.33
51 AT2G20020 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ATCAF1, CAF1 0.84 0.35 -0.31
52 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.83 0.31 -0.33
53 AT3G60750 Transketolase 0.83 0.32 -0.29
54 AT3G02450 cell division protein ftsH, putative 0.83 0.32 -0.29
55 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.83 0.33 -0.34
56 AT4G31040 CemA-like proton extrusion protein-related 0.83 0.32 -0.33
57 AT4G24175 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0307
(InterPro:IPR006839); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.83 0.32 -0.31
58 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.83 0.32 -0.3
59 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.83 0.31 -0.3
60 AT3G07430 YGGT family protein ATYLMG1-1, embryo defective 1990,
YLMG1-1		 0.82 0.3 -0.31
61 AT3G56680 Single-stranded nucleic acid binding R3H protein 0.82 0.31 -0.33
62 AT1G15690 Inorganic H pyrophosphatase family protein ARABIDOPSIS THALIANA V-PPASE 3,
AtVHP1;1, AVP-3, AVP1, FUGU 5		 0.82 0.31 -0.32
63 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.82 0.33 -0.31
64 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.82 0.34 -0.32
65 AT1G50000 methyltransferases 0.82 0.32 -0.31
66 AT3G20320 trigalactosyldiacylglycerol2 ATP-binding cassette I15,
trigalactosyldiacylglycerol2		 0.82 0.3 -0.3
67 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.82 0.32 -0.33
68 AT5G20720 chaperonin 20 ATCPN21, CHLOROPLAST CHAPERONIN
10, CHLOROPLAST CHAPERONIN 10,
chaperonin 20, CPN21		 0.82 0.31 -0.31
69 AT4G19710 aspartate kinase-homoserine dehydrogenase ii ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase ii		 0.82 0.31 -0.34
70 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.79 0.32 -0.3
71 AT5G54840 Ras-related small GTP-binding family protein ATSGP1, SGP1 -0.78 0.32 -0.32
72 AT3G14620 cytochrome P450, family 72, subfamily A, polypeptide 8 cytochrome P450, family 72,
subfamily A, polypeptide 8		 -0.77 0.32 -0.31
73 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.77 0.32 -0.31
74 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.74 0.3 -0.31
75 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 -0.74 0.32 -0.35
76 AT1G77920 bZIP transcription factor family protein -0.73 0.32 -0.32
77 AT4G36830 GNS1/SUR4 membrane protein family HOS3-1 -0.72 0.32 -0.33
78 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.71 0.29 -0.33
79 AT1G24440 RING/U-box superfamily protein -0.7 0.29 -0.32
80 AT5G66250 kinectin-related -0.69 0.34 -0.32
81 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.68 0.34 -0.32
82 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.68 0.3 -0.3
83 AT4G01070 UDP-Glycosyltransferase superfamily protein GT72B1, UDP-GLUCOSE-DEPENDENT
GLUCOSYLTRANSFERASE 72 B1		 -0.67 0.31 -0.29
84 AT2G15230 lipase 1 lipase 1, lipase 1 -0.66 0.31 -0.3
85 AT2G43290 Calcium-binding EF-hand family protein multicopy suppressors of snf4
deficiency in yeast 3		 -0.66 0.35 -0.33
86 AT1G76040 calcium-dependent protein kinase 29 calcium-dependent protein kinase
29		 -0.66 0.3 -0.32
87 AT3G04060 NAC domain containing protein 46 NAC domain containing protein 46,
NAC domain containing protein 46		 -0.66 0.31 -0.31
88 AT1G74590 glutathione S-transferase TAU 10 GLUTATHIONE S-TRANSFERASE TAU 10,
glutathione S-transferase TAU 10		 -0.65 0.29 -0.32
89 AT1G55265 Protein of unknown function, DUF538 -0.64 0.32 -0.3
90 AT5G14130 Peroxidase superfamily protein -0.64 0.3 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
91 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.71 0.47 -0.46