AT4G37170 : -
Query Information
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AGICode AT4G37170
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein 1 0.32 -0.32
2 AT3G53940 Mitochondrial substrate carrier family protein 0.8 0.32 -0.32
3 AT5G58740 HSP20-like chaperones superfamily protein -0.78 0.31 -0.33
4 AT1G70650 Ran BP2/NZF zinc finger-like superfamily protein 0.77 0.31 -0.32
5 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.77 0.31 -0.31
6 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 0.76 0.3 -0.31
7 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.32 -0.33
8 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.75 0.33 -0.31
9 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 -0.75 0.3 -0.32
10 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.75 0.33 -0.31
11 AT2G20710 Tetratricopeptide repeat (TPR)-like superfamily protein 0.75 0.32 -0.32
12 AT5G25540 CTC-interacting domain 6 CTC-interacting domain 6 -0.74 0.33 -0.3
13 AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.29 -0.33
14 AT1G14020 O-fucosyltransferase family protein 0.74 0.3 -0.31
15 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.74 0.33 -0.34
16 AT1G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.3 -0.33
17 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 -0.74 0.31 -0.31
18 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 0.73 0.31 -0.34
19 AT2G03160 SKP1-like 19 SKP1-like 19, SKP1-like 19 -0.73 0.32 -0.3
20 AT3G23490 cyanase cyanase -0.73 0.33 -0.3
21 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.73 0.32 -0.31
22 AT1G29040 unknown protein; LOCATED IN: chloroplast, vacuole;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Conserved
hypothetical protein CHP02058 (InterPro:IPR011719); Has 344
Blast hits to 344 proteins in 122 species: Archae - 2;
Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32;
Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).		 -0.73 0.29 -0.32
23 AT3G21800 UDP-glucosyl transferase 71B8 UDP-glucosyl transferase 71B8 0.73 0.33 -0.32
24 AT3G55140 Pectin lyase-like superfamily protein -0.73 0.31 -0.3
25 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 -0.72 0.33 -0.32
26 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 -0.72 0.31 -0.36
27 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 0.72 0.28 -0.34
28 AT4G39100 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 short life -0.72 0.32 -0.31
29 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.72 0.3 -0.31
30 AT3G62310 RNA helicase family protein 0.72 0.32 -0.33
31 AT1G34160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.31 -0.35
32 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.31 -0.33
33 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.72 0.32 -0.32
34 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 -0.72 0.31 -0.31
35 AT1G69470 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.72 0.32 -0.31
36 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.71 0.32 -0.31
37 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 0.71 0.31 -0.3
38 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 -0.71 0.32 -0.29
39 AT3G13820 F-box and associated interaction domains-containing protein 0.71 0.3 -0.32
40 AT4G10330 glycine-rich protein -0.71 0.32 -0.34
41 AT2G11650 transposable element gene 0.71 0.31 -0.33
42 AT5G21090 Leucine-rich repeat (LRR) family protein -0.71 0.32 -0.3
43 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.32 -0.3
44 AT3G11100 sequence-specific DNA binding transcription factors -0.71 0.31 -0.3
45 AT1G11280 S-locus lectin protein kinase family protein 0.71 0.33 -0.32
46 AT4G18530 Protein of unknown function (DUF707) -0.71 0.29 -0.33
47 AT5G28700 transposable element gene 0.71 0.31 -0.31
48 AT4G25770 alpha/beta-Hydrolases superfamily protein -0.7 0.29 -0.31
49 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 -0.7 0.3 -0.3
50 AT2G22690 zinc ion binding -0.7 0.32 -0.32
51 AT1G11060 WAPL (Wings apart-like protein regulation of
heterochromatin) protein		 0.7 0.32 -0.3
52 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 0.7 0.33 -0.33
53 AT2G02040 peptide transporter 2 ARABIDOPSIS THALIANA PEPTIDE
TRANSPORTER 2, ATPTR2-B, NITRATE
TRANSPORTER 1, peptide transporter
2, PTR2-B		 -0.7 0.31 -0.31
54 AT2G46080 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF793)
(TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in
20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi -
0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.32 -0.34
55 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.7 0.31 -0.32
56 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 0.7 0.31 -0.31
57 AT3G09085 Protein of unknown function (DUF962) -0.7 0.37 -0.32
58 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 -0.7 0.3 -0.29
59 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.7 0.32 -0.3
60 AT2G38710 AMMECR1 family -0.7 0.3 -0.29
61 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.29
62 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 -0.7 0.31 -0.3
63 AT3G18430 Calcium-binding EF-hand family protein -0.69 0.31 -0.34
64 AT4G29160 SNF7 family protein SNF7.1 -0.69 0.32 -0.33
65 AT5G30380 transposable element gene 0.69 0.32 -0.32
66 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.33 -0.31
67 AT1G04960 Protein of unknown function (DUF1664) -0.69 0.33 -0.31
68 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 -0.69 0.29 -0.32
69 AT5G07880 synaptosomal-associated protein SNAP25-like 29 ARABIDOPSIS THALIANA
SYNAPTOSOMAL-ASSOCIATED PROTEIN
SNAP25-LIKE 29,
synaptosomal-associated protein
SNAP25-like 29		 0.69 0.32 -0.33
70 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 -0.69 0.3 -0.31
71 AT3G52090 DNA-directed RNA polymerase, RBP11-like ATRPB13.6, NRPB11, NRPD11, NRPE11 -0.69 0.29 -0.31
72 AT2G39230 LATERAL ORGAN JUNCTION LATERAL ORGAN JUNCTION 0.69 0.33 -0.29
73 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.69 0.32 -0.34
74 AT5G27190 transposable element gene 0.69 0.32 -0.31
75 AT1G03100 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.32
76 AT2G21480 Malectin/receptor-like protein kinase family protein 0.69 0.31 -0.3
77 AT4G29490 Metallopeptidase M24 family protein -0.69 0.33 -0.32
78 AT2G21090 Pentatricopeptide repeat (PPR-like) superfamily protein 0.68 0.31 -0.32
79 AT2G19200 unknown protein 0.68 0.3 -0.32
80 AT1G06630 F-box/RNI-like superfamily protein -0.68 0.31 -0.3
81 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.3
82 AT2G30120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits
to 241 proteins in 42 species: Archae - 4; Bacteria - 15;
Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink).		 -0.68 0.29 -0.31
83 AT5G53070 Ribosomal protein L9/RNase H1 0.68 0.34 -0.32
84 AT2G45080 cyclin p3;1 cyclin p3;1 0.68 0.31 -0.3
85 AT3G17100 sequence-specific DNA binding transcription factors -0.68 0.32 -0.31
86 AT2G16400 BEL1-like homeodomain 7 BEL1-like homeodomain 7 0.68 0.31 -0.31
87 AT1G32610 hydroxyproline-rich glycoprotein family protein 0.68 0.3 -0.34
88 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.68 0.3 -0.32
89 AT3G13620 Amino acid permease family protein -0.68 0.31 -0.32
90 AT4G23950 Galactose-binding protein 0.68 0.33 -0.31
91 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 -0.68 0.29 -0.32
92 AT3G27430 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBB1 -0.68 0.32 -0.3
93 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 -0.68 0.3 -0.29
94 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 -0.68 0.32 -0.31
95 AT1G17080 Ribosomal protein L18ae family -0.68 0.33 -0.31
96 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family 0.67 0.33 -0.29
97 AT3G06760 Drought-responsive family protein -0.67 0.32 -0.31
98 AT3G20770 Ethylene insensitive 3 family protein AtEIN3, ETHYLENE-INSENSITIVE3 -0.67 0.34 -0.33
99 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.32 -0.31
100 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.67 0.29 -0.31
101 AT1G39430 transposable element gene 0.67 0.33 -0.28
102 AT1G13880 ELM2 domain-containing protein -0.67 0.3 -0.32
103 AT1G19230 Riboflavin synthase-like superfamily protein -0.67 0.31 -0.3
104 AT4G29420 F-box/RNI-like superfamily protein -0.67 0.34 -0.3
105 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 -0.67 0.3 -0.28
106 AT4G38170 FAR1-related sequence 9 FAR1-related sequence 9 0.67 0.31 -0.33
107 AT1G73120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; EXPRESSED IN:
root, cultured cell; Has 36 Blast hits to 36 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.33
108 AT2G24320 alpha/beta-Hydrolases superfamily protein 0.67 0.33 -0.32
109 AT1G23960 Protein of unknown function (DUF626) -0.67 0.31 -0.3
110 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.34 -0.32
111 AT1G42420 transposable element gene -0.67 0.33 -0.34
112 AT3G47510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.31 -0.33
113 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 -0.66 0.31 -0.31
114 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 -0.66 0.32 -0.3
115 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 0.66 0.3 -0.3
116 AT5G27330 Prefoldin chaperone subunit family protein 0.66 0.32 -0.3
117 AT3G20260 Protein of unknown function (DUF1666) 0.66 0.32 -0.32
118 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 0.66 0.31 -0.33
119 AT1G63300 Myosin heavy chain-related protein 0.66 0.32 -0.32
120 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 -0.66 0.3 -0.3
121 AT1G62085 Mitochondrial transcription termination factor family
protein		 0.66 0.32 -0.31
122 AT5G39960 GTP binding;GTP binding 0.66 0.32 -0.31
123 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.66 0.33 -0.3
124 AT1G26300 BSD domain-containing protein -0.66 0.32 -0.32
125 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 -0.66 0.31 -0.32
126 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 -0.66 0.31 -0.32
127 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.66 0.31 -0.31
128 AT3G31915 transposable element gene -0.66 0.33 -0.29
129 AT3G45310 Cysteine proteinases superfamily protein -0.65 0.31 -0.33
130 AT1G77820 transposable element gene 0.65 0.31 -0.31
131 AT1G54210 Ubiquitin-like superfamily protein AUTOPHAGY 12, ATATG12, AUTOPHAGY
12 A		 -0.65 0.31 -0.31
132 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.65 0.33 -0.32
133 AT5G66960 Prolyl oligopeptidase family protein 0.65 0.31 -0.31
134 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein 0.65 0.32 -0.32
135 AT2G30920 coenzyme Q 3 coenzyme Q 3, COQ3, coenzyme Q 3,
embryo defective 3002		 -0.65 0.32 -0.32
136 AT3G04970 DHHC-type zinc finger family protein -0.65 0.31 -0.33
137 AT1G53660 nodulin MtN21 /EamA-like transporter family protein 0.65 0.31 -0.3
138 AT2G01310 BEST Arabidopsis thaliana protein match is:
cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.1); Has
37 Blast hits to 37 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.33 -0.3
139 AT2G06120 transposable element gene 0.65 0.33 -0.31
140 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 -0.65 0.3 -0.34
141 AT4G32430 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.32 -0.29
142 AT3G22920 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.65 0.32 -0.3
143 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.32 -0.31
144 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8		 0.65 0.31 -0.32
145 AT3G61350 SKP1 interacting partner 4 SKP1 interacting partner 4 -0.65 0.34 -0.32
146 AT1G27880 DEAD/DEAH box RNA helicase family protein 0.65 0.31 -0.32
147 AT1G55540 Nuclear pore complex protein 0.65 0.33 -0.31
148 AT1G20750 RAD3-like DNA-binding helicase protein -0.65 0.34 -0.31
149 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 -0.65 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
150 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - 0.66 0.3 -0.3