AT3G56890 : -
Query Information
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AGICode AT3G56890
Description F-box associated ubiquitination effector family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56890 F-box associated ubiquitination effector family protein 1 0.31 -0.31
2 AT3G44980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G07215.1); Has 2 Blast hits to
2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.74 0.3 -0.32
3 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.73 0.32 -0.32
4 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.72 0.32 -0.32
5 AT3G47380 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.7 0.33 -0.31
6 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 0.7 0.34 -0.35
7 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.7 0.33 -0.32
8 AT4G34500 Protein kinase superfamily protein -0.68 0.32 -0.32
9 AT2G45610 alpha/beta-Hydrolases superfamily protein 0.67 0.31 -0.31
10 AT5G14180 Myzus persicae-induced lipase 1 Myzus persicae-induced lipase 1 0.67 0.32 -0.34
11 AT3G16570 rapid alkalinization factor 23 ARABIDOPSIS RAPID ALKALINIZATION
FACTOR 23, rapid alkalinization
factor 23		 -0.67 0.33 -0.31
12 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.67 0.31 -0.33
13 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 0.66 0.32 -0.28
14 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 -0.66 0.31 -0.34
15 AT1G62914 pentatricopeptide (PPR) repeat-containing protein 0.66 0.31 -0.31
16 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 0.66 0.33 -0.32
17 AT4G38120 ARM repeat superfamily protein 0.66 0.3 -0.32
18 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH -0.65 0.32 -0.32
19 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 -0.65 0.31 -0.32
20 AT2G14260 proline iminopeptidase proline iminopeptidase -0.65 0.28 -0.32
21 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 0.65 0.33 -0.31
22 AT2G30620 winged-helix DNA-binding transcription factor family
protein		 -0.65 0.32 -0.33
23 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 0.65 0.31 -0.32
24 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 0.65 0.32 -0.31
25 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 -0.65 0.32 -0.32
26 AT2G07180 Protein kinase superfamily protein -0.65 0.31 -0.31
27 AT3G63180 TIC-like TICKLE, TIC-like 0.64 0.32 -0.32
28 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein -0.64 0.32 -0.32
29 AT2G33160 glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein		 -0.64 0.34 -0.32
30 AT1G60450 galactinol synthase 7 galactinol synthase 7, galactinol
synthase 7		 0.64 0.32 -0.32
31 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.64 0.32 -0.31
32 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.33 -0.32
33 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.63 0.33 -0.34
34 AT4G11730 Cation transporter/ E1-E2 ATPase family protein -0.63 0.3 -0.31
35 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 -0.63 0.33 -0.3
36 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 -0.63 0.31 -0.31
37 AT3G49160 pyruvate kinase family protein 0.63 0.31 -0.33
38 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.63 0.32 -0.29
39 AT3G43760 transposable element gene 0.63 0.32 -0.31
40 AT1G13610 alpha/beta-Hydrolases superfamily protein -0.63 0.31 -0.32
41 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.62 0.31 -0.31
42 AT5G07040 RING/U-box superfamily protein -0.62 0.33 -0.31
43 AT1G20180 Protein of unknown function (DUF677) 0.62 0.3 -0.33
44 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.62 0.32 -0.32
45 AT3G01350 Major facilitator superfamily protein -0.61 0.31 -0.32
46 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.31 -0.32
47 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.61 0.32 -0.3
48 AT3G20210 delta vacuolar processing enzyme delta vacuolar processing enzyme,
DELTA VACUOLAR PROCESSING ENZYME		 0.61 0.3 -0.33
49 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.61 0.31 -0.32
50 AT1G13540 Protein of unknown function (DUF1262) -0.61 0.32 -0.32
51 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 0.61 0.3 -0.31
52 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.33 -0.31
53 AT4G05550 transposable element gene -0.61 0.34 -0.31
54 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 -0.61 0.3 -0.31
55 AT5G04180 alpha carbonic anhydrase 3 alpha carbonic anhydrase 3, ALPHA
CARBONIC ANHYDRASE 3		 -0.61 0.33 -0.29
56 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 0.61 0.31 -0.32
57 AT4G21326 subtilase 3.12 subtilase 3.12, subtilase 3.12 0.6 0.3 -0.33
58 AT1G49250 ATP-dependent DNA ligase 0.6 0.3 -0.31
59 AT5G43930 Transducin family protein / WD-40 repeat family protein 0.6 0.34 -0.34
60 AT2G24950 Protein of Unknown Function (DUF239) -0.6 0.32 -0.33
61 AT1G20120 GDSL-like Lipase/Acylhydrolase superfamily protein 0.6 0.29 -0.32
62 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.6 0.3 -0.31
63 AT3G02770 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.6 0.29 -0.3
64 AT3G19610 Plant protein of unknown function (DUF936) -0.6 0.31 -0.31
65 AT1G49350 pfkB-like carbohydrate kinase family protein -0.6 0.31 -0.33
66 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.3 -0.31
67 AT1G44050 Cysteine/Histidine-rich C1 domain family protein -0.6 0.32 -0.33
68 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.32 -0.3
69 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 0.6 0.32 -0.32
70 AT1G41797 transposable element gene -0.6 0.32 -0.3
71 AT4G22650 CONTAINS InterPro DOMAIN/s: Plant lipid transfer
protein/seed storage/trypsin-alpha amylase inhibitor
(InterPro:IPR003612); BEST Arabidopsis thaliana protein
match is: Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein
(TAIR:AT4G22640.1); Has 25 Blast hits to 25 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.33 -0.32
72 AT3G18170 Glycosyltransferase family 61 protein -0.6 0.32 -0.3
73 AT2G45720 ARM repeat superfamily protein -0.59 0.31 -0.32
74 AT5G06610 Protein of unknown function (DUF620) -0.59 0.29 -0.33
75 AT1G05330 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.33 -0.31
76 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 0.59 0.31 -0.3
77 AT2G25760 Protein kinase family protein 0.59 0.31 -0.33
78 AT1G49170 Protein of unknown function (DUF167) -0.59 0.28 -0.33
79 AT3G23040 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.33 -0.28
80 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein		 -0.59 0.32 -0.32
81 AT2G21490 dehydrin LEA dehydrin LEA 0.59 0.3 -0.31
82 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.59 0.31 -0.29
83 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 -0.58 0.33 -0.3
84 AT1G75550 glycine-rich protein 0.58 0.32 -0.31
85 AT5G51340 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.33 -0.34
86 AT1G23350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.58 0.31 -0.31
87 AT2G11270 citrate synthase-related 0.58 0.3 -0.32
88 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein -0.58 0.34 -0.3
89 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.28 -0.3
90 AT3G43920 dicer-like 3 DICER-LIKE 3, dicer-like 3 0.58 0.31 -0.31
91 AT1G42250 transposable element gene 0.58 0.31 -0.29
92 AT4G17640 casein kinase II beta chain 2 casein kinase II beta chain 2 -0.58 0.33 -0.33
93 AT2G04710 transposable element gene 0.57 0.32 -0.32
94 AT4G28670 Protein kinase family protein with domain of unknown
function (DUF26)		 -0.57 0.32 -0.32
95 AT1G64280 regulatory protein (NPR1) ARABIDOPSIS NONEXPRESSER OF PR
GENES 1, NON-INDUCIBLE IMMUNITY 1,
NONEXPRESSER OF PR GENES 1,
SALICYLIC ACID INSENSITIVE 1		 -0.57 0.32 -0.3
96 AT5G05310 TLC ATP/ADP transporter 0.57 0.3 -0.3
97 AT2G07360 SH3 domain-containing protein 0.57 0.31 -0.31
98 AT5G23150 Tudor/PWWP/MBT domain-containing protein ENHANCER OF AG-4 2 0.57 0.31 -0.3
99 AT1G50720 Stigma-specific Stig1 family protein -0.57 0.32 -0.3
100 AT1G03960 Calcium-binding EF hand family protein 0.57 0.31 -0.31
101 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 0.57 0.33 -0.32
102 AT4G01920 Cysteine/Histidine-rich C1 domain family protein 0.57 0.33 -0.31
103 AT4G29200 Beta-galactosidase related protein -0.57 0.32 -0.31
104 AT4G37020 BEST Arabidopsis thaliana protein match is: eukaryotic
initiation factor 4A-III (TAIR:AT3G19760.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.34 -0.36
105 AT1G04700 PB1 domain-containing protein tyrosine kinase -0.56 0.31 -0.3
106 AT3G01240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01230.1); Has 12 Blast hits to 12 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.56 0.34 -0.31
107 AT4G08340 transposable element gene -0.56 0.29 -0.36
108 AT4G31930 Mitochondrial glycoprotein family protein -0.55 0.34 -0.34
109 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.55 0.33 -0.33
110 AT1G01660 RING/U-box superfamily protein -0.55 0.32 -0.3
111 AT4G04530 transposable element gene -0.55 0.3 -0.33
112 AT1G26860 transposable element gene -0.55 0.29 -0.33
113 AT1G31760 SWIB/MDM2 domain superfamily protein -0.55 0.31 -0.3
114 AT1G49880 Erv1/Alr family protein AtErv1, EMBRYO DEFECTIVE 3106,
Erv1		 -0.55 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0086 Disinapylspermidine - - - 0.67 0.44 -0.45