AT3G56740 : -
Query Information
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AGICode AT3G56740
Description Ubiquitin-associated (UBA) protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56740 Ubiquitin-associated (UBA) protein 1 0.31 -0.32
2 AT1G31850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.31 -0.31
3 AT2G02760 ubiquiting-conjugating enzyme 2 ubiquiting-conjugating enzyme 2,
ubiquitin-conjugating enzyme 2,
ubiquiting-conjugating enzyme 2		 0.72 0.32 -0.31
4 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 0.71 0.3 -0.33
5 AT3G14400 ubiquitin-specific protease 25 ubiquitin-specific protease 25 -0.7 0.33 -0.33
6 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.33 -0.34
7 AT5G02040 prenylated RAB acceptor 1.A1 prenylated RAB acceptor 1.A1 0.69 0.34 -0.31
8 AT2G23840 HNH endonuclease 0.68 0.32 -0.32
9 AT4G09580 SNARE associated Golgi protein family 0.68 0.32 -0.3
10 AT3G25890 Integrase-type DNA-binding superfamily protein cytokinin response factor 11 -0.66 0.31 -0.32
11 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 -0.66 0.31 -0.3
12 AT1G21710 8-oxoguanine-DNA glycosylase 1 ARABIDOPSIS 8-OXOGUANINE-DNA
GLYCOSYLASE 1, 8-oxoguanine-DNA
glycosylase 1		 -0.66 0.32 -0.32
13 AT5G36950 DegP protease 10 DegP protease 10 -0.65 0.31 -0.32
14 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 -0.65 0.31 -0.31
15 AT1G71480 Nuclear transport factor 2 (NTF2) family protein 0.64 0.33 -0.32
16 AT2G05810 ARM repeat superfamily protein -0.64 0.33 -0.31
17 AT5G54855 Pollen Ole e 1 allergen and extensin family protein 0.63 0.31 -0.32
18 AT5G49830 exocyst complex component 84B exocyst complex component 84B -0.63 0.33 -0.35
19 AT1G51690 protein phosphatase 2A 55 kDa regulatory subunit B alpha
isoform		 protein phosphatase 2A 55 kDa
regulatory subunit B alpha
isoform, protein phosphatase 2A 55
kDa regulatory subunit B alpha
isoform		 0.63 0.32 -0.32
20 AT5G65630 global transcription factor group E7 global transcription factor group
E7		 -0.63 0.32 -0.3
21 AT1G61400 S-locus lectin protein kinase family protein -0.62 0.31 -0.31
22 AT1G31290 ARGONAUTE 3 ARGONAUTE 3 -0.62 0.31 -0.31
23 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 -0.62 0.32 -0.31
24 AT1G50760 Aminotransferase-like, plant mobile domain family protein -0.62 0.32 -0.31
25 AT1G68700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits
to 14 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.32
26 AT5G40270 HD domain-containing metal-dependent phosphohydrolase
family protein		 0.62 0.32 -0.33
27 AT2G17820 histidine kinase 1 AHK1, histidine kinase 1,
histidine kinase 1		 -0.62 0.33 -0.32
28 AT1G32840 transposable element gene 0.62 0.31 -0.32
29 AT5G58610 PHD finger transcription factor, putative -0.61 0.32 -0.3
30 AT4G32560 paramyosin-related 0.61 0.32 -0.3
31 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 0.61 0.31 -0.31
32 AT5G47620 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.31 -0.29
33 AT5G26840 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.6 0.31 -0.35
34 AT1G55520 TATA binding protein 2 A. THALIANA TATA BINDING PROTEIN
2, TATA binding protein 2		 0.6 0.31 -0.32
35 AT3G59530 Calcium-dependent phosphotriesterase superfamily protein LESS ADHERENT POLLEN 3 0.6 0.31 -0.29
36 ATMG01370 hypothetical protein ORF111D -0.6 0.3 -0.31
37 AT1G06380 Ribosomal protein L1p/L10e family -0.6 0.3 -0.33
38 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 0.59 0.31 -0.32
39 AT5G22280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.32 -0.31
40 AT5G06810 Mitochondrial transcription termination factor family
protein		 -0.59 0.32 -0.34
41 AT5G47540 Mo25 family protein -0.59 0.31 -0.33
42 AT3G57810 Cysteine proteinases superfamily protein 0.59 0.32 -0.32
43 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 0.58 0.34 -0.3
44 AT2G44260 Plant protein of unknown function (DUF946) 0.58 0.32 -0.3
45 AT5G60790 ABC transporter family protein ATP-binding cassette F1,
ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 1, GENERAL
CONTROL NON-REPRESSIBLE 1		 -0.58 0.33 -0.32
46 AT4G30770 Putative membrane lipoprotein -0.58 0.34 -0.29
47 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein -0.58 0.31 -0.33
48 AT1G33250 Protein of unknown function (DUF604) -0.58 0.33 -0.3
49 AT3G30190 transposable element gene -0.58 0.31 -0.33
50 AT3G30846 transposable element gene 0.58 0.32 -0.31
51 AT5G58400 Peroxidase superfamily protein 0.57 0.31 -0.3
52 AT3G53840 Protein kinase superfamily protein 0.57 0.3 -0.32
53 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.33 -0.33
54 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E		 0.57 0.32 -0.3
55 AT3G30800 transposable element gene -0.57 0.32 -0.31
56 AT1G15870 Mitochondrial glycoprotein family protein -0.57 0.32 -0.32
57 AT4G35130 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.29 -0.3
58 AT4G29910 origin recognition complex protein 5 ATORC5, EMBRYO DEFECTIVE 2798,
origin recognition complex protein
5		 -0.56 0.3 -0.32
59 AT2G42830 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 5, SHATTERPROOF 2 -0.56 0.3 -0.3
60 AT1G67500 recovery protein 3 recovery protein 3, recovery
protein 3		 0.56 0.3 -0.31
61 AT3G21680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root, flower,
stamen; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 34 Blast hits to 34 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.3 -0.32
62 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.31 -0.3
63 AT1G42570 pseudogene, similar to P0529E05.9, blastp match of 56%
identity and 1.2e-110 P-value to
GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza
sativa (japonica cultivar-group)}		 -0.56 0.31 -0.32
64 AT4G16830 Hyaluronan / mRNA binding family 0.56 0.33 -0.34
65 AT1G17630 Pentatricopeptide repeat (PPR-like) superfamily protein -0.56 0.31 -0.32
66 AT5G21130 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.56 0.32 -0.31
67 AT5G05790 Duplicated homeodomain-like superfamily protein -0.56 0.3 -0.31
68 AT4G19000 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS2 (FROM
YEAST INTERACTS WITH SPT6), IWS2		 -0.56 0.29 -0.31
69 AT3G07930 DNA glycosylase superfamily protein 0.55 0.31 -0.3
70 AT3G03110 exportin 1B CRM1B, exportin 1B -0.55 0.31 -0.31
71 AT5G39260 expansin A21 ATEXP21, expansin A21, ATHEXP
ALPHA 1.20, EXPANSIN 21, expansin
A21		 -0.55 0.31 -0.29
72 AT3G01650 RING domain ligase1 RING domain ligase1 0.55 0.33 -0.32
73 AT2G05590 TLD-domain containing nucleolar protein 0.55 0.31 -0.3
74 AT1G76880 Duplicated homeodomain-like superfamily protein -0.55 0.29 -0.32
75 AT3G16610 pentatricopeptide (PPR) repeat-containing protein -0.55 0.3 -0.31
76 AT5G57200 ENTH/ANTH/VHS superfamily protein -0.55 0.31 -0.32
77 AT4G04450 WRKY family transcription factor AtWRKY42, WRKY42 -0.55 0.3 -0.31
78 AT3G27800 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.35 -0.33
79 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ARABIDOPSIS THALIANA ATAXIA
TELANGIECTASIA-MUTATED AND
RAD3-RELATED, Ataxia
telangiectasia-mutated and
RAD3-related, ATRAD3		 -0.55 0.32 -0.34
80 AT2G32050 Family of unknown function (DUF572) -0.55 0.33 -0.32
81 AT5G39360 EID1-like 2 EID1-like 2 0.55 0.32 -0.33
82 AT1G21870 golgi nucleotide sugar transporter 5 golgi nucleotide sugar transporter
5		 0.55 0.3 -0.31
83 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 -0.54 0.32 -0.3
84 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 -0.54 0.32 -0.32
85 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 -0.54 0.33 -0.31
86 AT2G35750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.54 0.31 -0.32
87 AT3G04390 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin
binding protein		 0.54 0.32 -0.32
88 AT2G22100 RNA-binding (RRM/RBD/RNP motifs) family protein -0.54 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.7 0.44 -0.45 C0252
90 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.7 0.45 -0.44 C0035
91 C0145 Maltotetraose - Maltotetraose starch degradation II -0.67 0.47 -0.42 C0145