AT1G39430 : -
Query Information
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AGICode AT1G39430
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G39430 transposable element gene 1 0.3 -0.3
2 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 0.79 0.34 -0.32
3 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.73 0.31 -0.31
4 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 0.72 0.31 -0.31
5 AT2G36550 CONTAINS InterPro DOMAIN/s: NLI interacting factor
(InterPro:IPR004274); BEST Arabidopsis thaliana protein
match is: Haloacid dehalogenase-like hydrolase (HAD)
superfamily protein (TAIR:AT2G36540.1); Has 91 Blast hits
to 91 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 2; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.72 0.34 -0.31
6 AT3G13820 F-box and associated interaction domains-containing protein 0.71 0.31 -0.3
7 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 -0.71 0.31 -0.32
8 AT2G36700 Pectin lyase-like superfamily protein 0.7 0.29 -0.35
9 AT2G45080 cyclin p3;1 cyclin p3;1 0.7 0.3 -0.33
10 AT4G27980 Domain of unknown function (DUF3444) 0.7 0.31 -0.31
11 AT1G12220 Disease resistance protein (CC-NBS-LRR class) family RESISTANT TO P. SYRINGAE 5 0.7 0.32 -0.29
12 AT5G28700 transposable element gene 0.7 0.31 -0.33
13 AT3G30570 transposable element gene 0.7 0.3 -0.33
14 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.3 -0.29
15 AT5G66890 Leucine-rich repeat (LRR) family protein 0.68 0.32 -0.33
16 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.31 -0.29
17 AT3G52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / D111/G-patch domain-containing protein		 -0.68 0.29 -0.31
18 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.31 -0.3
19 AT1G61150 LisH and RanBPM domains containing protein -0.67 0.3 -0.32
20 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family 0.67 0.33 -0.33
21 AT4G37950 Rhamnogalacturonate lyase family protein 0.67 0.31 -0.31
22 AT4G35370 Transducin/WD40 repeat-like superfamily protein 0.67 0.31 -0.31
23 AT5G58150 Leucine-rich repeat protein kinase family protein 0.67 0.31 -0.32
24 AT4G13060 F-box associated ubiquitination effector family protein 0.67 0.32 -0.3
25 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 -0.67 0.29 -0.33
26 AT5G17140 Cysteine proteinases superfamily protein 0.66 0.34 -0.33
27 AT1G62700 Arabidopsis NAC domain containing protein 26 Arabidopsis NAC domain containing
protein 26, VASCULAR RELATED
NAC-DOMAIN PROTEIN 5		 -0.66 0.31 -0.32
28 AT3G10590 Duplicated homeodomain-like superfamily protein -0.66 0.33 -0.3
29 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.66 0.31 -0.31
30 AT4G38170 FAR1-related sequence 9 FAR1-related sequence 9 0.66 0.32 -0.3
31 AT5G09230 sirtuin 2 SIRTUIN 2, sirtuin 2 -0.66 0.33 -0.36
32 AT5G27220 Frigida-like protein 0.66 0.32 -0.32
33 AT1G20750 RAD3-like DNA-binding helicase protein -0.66 0.34 -0.33
34 AT5G27190 transposable element gene 0.66 0.34 -0.3
35 AT3G31915 transposable element gene -0.66 0.34 -0.33
36 AT3G10890 Glycosyl hydrolase superfamily protein -0.65 0.31 -0.31
37 AT1G26350 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.31 -0.31
38 AT2G36060 MMS ZWEI homologue 3 MMS ZWEI homologue 3, UBIQUITIN E2
VARIANT 1C		 -0.65 0.33 -0.31
39 AT5G44330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.32 -0.31
40 AT1G67220 histone acetyltransferase of the CBP family 2 ARABIDOPSIS THALIANA P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
1, HAC02, histone
acetyltransferase of the CBP
family 2		 0.65 0.3 -0.31
41 AT1G15460 HCO3- transporter family ARABIDOPSIS THALIANA REQUIRES HIGH
BORON 4, REQUIRES HIGH BORON 4		 0.65 0.3 -0.32
42 AT2G17610 transposable element gene 0.65 0.35 -0.32
43 AT2G06020 Homeodomain-like superfamily protein -0.64 0.31 -0.32
44 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 0.64 0.33 -0.31
45 AT1G47655 Dof-type zinc finger DNA-binding family protein -0.64 0.31 -0.33
46 AT2G30120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits
to 241 proteins in 42 species: Archae - 4; Bacteria - 15;
Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink).		 -0.64 0.33 -0.31
47 AT1G20480 AMP-dependent synthetase and ligase family protein -0.64 0.3 -0.29
48 AT2G32360 Ubiquitin-like superfamily protein 0.64 0.33 -0.32
49 AT4G12530 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.64 0.32 -0.29
50 AT3G04250 F-box associated ubiquitination effector family protein 0.64 0.33 -0.33
51 AT2G41550 Rho termination factor 0.64 0.33 -0.32
52 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.33 -0.32
53 AT4G10330 glycine-rich protein -0.63 0.35 -0.31
54 AT4G39100 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 short life -0.63 0.31 -0.32
55 AT2G04600 transposable element gene 0.63 0.31 -0.33
56 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein -0.63 0.31 -0.32
57 AT2G20050 protein serine/threonine phosphatases;protein
kinases;catalytics;cAMP-dependent protein kinase
regulators;ATP binding;protein serine/threonine
phosphatases		 0.63 0.33 -0.3
58 AT1G74220 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, flower, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast
hits to 347 proteins in 86 species: Archae - 0; Bacteria -
17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2;
Other Eukaryotes - 136 (source: NCBI BLink).		 -0.63 0.31 -0.31
59 AT2G29780 Galactose oxidase/kelch repeat superfamily protein 0.63 0.31 -0.32
60 AT5G06020 Plant self-incompatibility protein S1 family -0.63 0.29 -0.33
61 AT5G49320 Protein of unknown function (DUF1218) 0.62 0.31 -0.32
62 AT1G32030 Domain of unknown function (DUF313) 0.62 0.32 -0.3
63 AT1G27160 valyl-tRNA synthetase / valine--tRNA ligase-related -0.62 0.33 -0.32
64 AT5G59050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.62 0.3 -0.3
65 AT1G56380 Mitochondrial transcription termination factor family
protein		 0.62 0.32 -0.31
66 AT2G18340 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.62 0.31 -0.33
67 AT4G04050 transposable element gene 0.62 0.3 -0.32
68 AT1G18180 Protein of unknown function (DUF1295) -0.62 0.33 -0.33
69 AT3G14880 BEST Arabidopsis thaliana protein match is: transcription
factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to
560 proteins in 40 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.3 -0.32
70 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 0.61 0.32 -0.31
71 AT2G04730 pseudogene, F-box protein-related, contains TIGRFAM
TIGR01640 : F-box protein interaction domain; similar to
F-box protein family, AtFBX9 (GI:20197985) (Arabidopsis
thaliana)		 0.61 0.3 -0.32
72 AT4G01440 nodulin MtN21 /EamA-like transporter family protein 0.61 0.33 -0.33
73 AT2G20560 DNAJ heat shock family protein -0.61 0.32 -0.31
74 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 0.61 0.33 -0.31
75 AT3G13620 Amino acid permease family protein -0.61 0.33 -0.3
76 AT1G07745 homolog of RAD51 D ATRAD51D, homolog of RAD51 D,
SUPPRESOR OF SNI1		 -0.61 0.32 -0.32
77 AT1G05760 Mannose-binding lectin superfamily protein restricted tev movement 1 -0.61 0.31 -0.31
78 AT2G27375 transposable element gene 0.61 0.29 -0.34
79 AT2G04038 basic leucine-zipper 48 basic leucine-zipper 48, basic
leucine-zipper 48		 -0.61 0.32 -0.33
80 AT5G17960 Cysteine/Histidine-rich C1 domain family protein 0.61 0.32 -0.31
81 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-		 0.61 0.33 -0.32
82 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein -0.61 0.32 -0.32
83 AT3G43140 transposable element gene 0.61 0.32 -0.29
84 AT1G69850 nitrate transporter 1:2 nitrate transporter 1:2, nitrate
transporter 1:2, NTL1		 0.61 0.32 -0.31
85 AT1G67570 Protein of unknown function (DUF3537) 0.61 0.33 -0.3
86 AT2G21480 Malectin/receptor-like protein kinase family protein 0.61 0.29 -0.32
87 AT3G12480 nuclear factor Y, subunit C11 nuclear factor Y, subunit C11 -0.6 0.31 -0.3
88 AT5G08535 D111/G-patch domain-containing protein -0.6 0.31 -0.31
89 AT1G66100 Plant thionin -0.6 0.31 -0.32
90 AT4G03940 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 0.6 0.3 -0.35
91 AT1G32610 hydroxyproline-rich glycoprotein family protein 0.6 0.3 -0.29
92 AT4G12410 SAUR-like auxin-responsive protein family -0.6 0.32 -0.33
93 AT3G24500 multiprotein bridging factor 1C ATMBF1C, multiprotein bridging
factor 1C		 -0.6 0.32 -0.3
94 AT5G08550 GC-rich sequence DNA-binding factor-like protein increased level of polyploidy1-1D 0.6 0.32 -0.29
95 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.31
96 AT1G20940 F-box family protein 0.6 0.31 -0.33
97 AT3G42320 transposable element gene 0.6 0.34 -0.31
98 AT2G06640 transposable element gene -0.6 0.33 -0.33
99 AT5G07310 Integrase-type DNA-binding superfamily protein 0.6 0.32 -0.3
100 AT3G61220 NAD(P)-binding Rossmann-fold superfamily protein short-chain
dehydrogenase/reductase 1		 -0.59 0.32 -0.31
101 AT1G14400 ubiquitin carrier protein 1 ATUBC1, ubiquitin carrier protein
1, UBIQUITIN CONJUGATING ENZYME 1		 -0.59 0.31 -0.32
102 AT1G09930 oligopeptide transporter 2 oligopeptide transporter 2,
oligopeptide transporter 2		 -0.59 0.34 -0.32
103 AT3G52300 ATP synthase D chain, mitochondrial ATP synthase D chain,
mitochondrial		 -0.59 0.31 -0.32
104 AT1G11970 Ubiquitin-like superfamily protein -0.59 0.32 -0.31
105 AT5G52870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 5		 -0.58 0.31 -0.32
106 AT1G47765 F-box and associated interaction domains-containing protein -0.58 0.3 -0.3
107 AT1G75290 NAD(P)-binding Rossmann-fold superfamily protein -0.58 0.31 -0.35
108 AT4G10240 B-box zinc finger family protein -0.58 0.32 -0.32
109 AT4G03840 transposable element gene -0.57 0.32 -0.32
110 AT2G23920 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.3 -0.31
111 AT5G46010 Homeodomain-like superfamily protein -0.57 0.3 -0.29
112 AT4G20080 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 -0.57 0.33 -0.3
113 AT1G63070 pentatricopeptide (PPR) repeat-containing protein -0.57 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - 0.65 0.33 -0.32