AT1G77380 : amino acid permease 3
Query Information
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AGICode AT1G77380
Description amino acid permease 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 1 0.3 -0.31
2 AT5G13330 related to AP2 6l related to AP2 6l 0.81 0.32 -0.31
3 AT5G01210 HXXXD-type acyl-transferase family protein 0.79 0.32 -0.33
4 AT3G29030 expansin A5 ARABIDOPSIS THALIANA EXPANSIN 5,
ARABIDOPSIS THALIANA EXPANSIN A5,
ATHEXP ALPHA 1.4, EXPANSIN 5,
expansin A5		 -0.78 0.32 -0.33
5 AT2G40940 ethylene response sensor 1 ETHYLENE RESPONSE SENSOR, ethylene
response sensor 1		 0.76 0.32 -0.31
6 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 0.76 0.32 -0.32
7 AT5G26330 Cupredoxin superfamily protein -0.75 0.31 -0.29
8 AT4G26790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.75 0.32 -0.31
9 AT2G35470 unknown protein; Has 25 Blast hits to 25 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.32 -0.31
10 AT3G01550 phosphoenolpyruvate (pep)/phosphate translocator 2 PHOSPHOENOLPYRUVATE
(PEP)/PHOSPHATE TRANSLOCATOR 2,
phosphoenolpyruvate
(pep)/phosphate translocator 2		 -0.74 0.3 -0.29
11 AT5G23400 Leucine-rich repeat (LRR) family protein -0.74 0.29 -0.34
12 AT3G23150 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 ethylene response 2 0.74 0.32 -0.32
13 AT3G14610 cytochrome P450, family 72, subfamily A, polypeptide 7 cytochrome P450, family 72,
subfamily A, polypeptide 7		 0.74 0.29 -0.32
14 AT5G25350 EIN3-binding F box protein 2 EIN3-binding F box protein 2 0.74 0.32 -0.31
15 AT2G28410 unknown protein; Has 18 Blast hits to 18 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.32 -0.32
16 AT5G45850 Protein of unknown function (DUF688) -0.74 0.32 -0.33
17 AT3G55420 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.33 -0.31
18 AT3G56170 Ca-2+ dependent nuclease Ca-2+ dependent nuclease 0.73 0.33 -0.33
19 AT5G44400 FAD-binding Berberine family protein -0.73 0.31 -0.3
20 AT4G30400 RING/U-box superfamily protein -0.73 0.31 -0.31
21 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 -0.73 0.3 -0.31
22 AT5G50740 Heavy metal transport/detoxification superfamily protein -0.73 0.31 -0.32
23 AT5G49700 Predicted AT-hook DNA-binding family protein 0.73 0.32 -0.32
24 AT1G31335 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 34 Blast hits to 34 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.73 0.31 -0.31
25 AT5G39610 NAC domain containing protein 6 Arabidopsis NAC domain containing
protein 92, NAC domain containing
protein 2, NAC domain containing
protein 6, NAC domain containing
protein 2, NAC domain containing
protein 6, ORESARA 1		 0.73 0.32 -0.34
26 AT5G50740 Heavy metal transport/detoxification superfamily protein -0.73 0.32 -0.34
27 AT4G15550 indole-3-acetate beta-D-glucosyltransferase indole-3-acetate
beta-D-glucosyltransferase		 0.72 0.3 -0.31
28 AT5G01370 ALC-interacting protein 1 ALC-interacting protein 1 -0.72 0.33 -0.32
29 AT2G30820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06660.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.72 0.3 -0.32
30 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 0.72 0.31 -0.28
31 AT2G23340 DREB and EAR motif protein 3 DREB and EAR motif protein 3 -0.72 0.32 -0.31
32 AT1G67870 glycine-rich protein -0.71 0.31 -0.31
33 AT2G42280 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.71 0.33 -0.32
34 AT1G22160 Protein of unknown function (DUF581) -0.71 0.3 -0.3
35 AT2G15740 C2H2-like zinc finger protein -0.71 0.33 -0.31
36 AT5G07690 myb domain protein 29 myb domain protein 29, myb domain
protein 29, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 2		 -0.71 0.33 -0.31
37 AT2G45210 SAUR-like auxin-responsive protein family 0.7 0.32 -0.32
38 AT3G04070 NAC domain containing protein 47 NAC domain containing protein 47,
NAC domain containing protein 47		 0.7 0.32 -0.32
39 AT5G01090 Concanavalin A-like lectin family protein -0.7 0.31 -0.34
40 AT2G44080 ARGOS-like ARGOS-like 0.7 0.31 -0.33
41 AT5G66800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.3 -0.32
42 AT2G41230 unknown protein; Has 75 Blast hits to 75 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ORGAN SIZE RELATED 1 0.69 0.31 -0.34
43 AT1G25560 AP2/B3 transcription factor family protein ETHYLENE RESPONSE DNA BINDING
FACTOR 1, TEMPRANILLO 1		 0.69 0.31 -0.32
44 AT1G11480 eukaryotic translation initiation factor-related 0.69 0.31 -0.3
45 AT3G53420 plasma membrane intrinsic protein 2A PLASMA MEMBRANE INTRINSIC PROTEIN
2, PLASMA MEMBRANE INTRINSIC
PROTEIN 2;1, plasma membrane
intrinsic protein 2A		 -0.69 0.3 -0.31
46 AT3G22231 pathogen and circadian controlled 1 PATHOGEN AND CIRCADIAN CONTROLLED
1		 -0.69 0.33 -0.33
47 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.68 0.34 -0.34
48 AT3G19230 Leucine-rich repeat (LRR) family protein -0.68 0.32 -0.33
49 AT3G19520 Protein of unknown function (DUF626) 0.68 0.33 -0.33
50 AT5G47820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 FRAGILE FIBER 1 -0.68 0.32 -0.31
51 AT4G34980 subtilisin-like serine protease 2 subtilisin-like serine protease 2 -0.68 0.31 -0.32
52 AT3G22810 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.68 0.32 -0.3
53 AT5G64440 fatty acid amide hydrolase fatty acid amide hydrolase, fatty
acid amide hydrolase		 0.68 0.33 -0.31
54 AT5G49690 UDP-Glycosyltransferase superfamily protein 0.68 0.32 -0.3
55 AT3G22425 imidazoleglycerol-phosphate dehydratase HISN5A,
imidazoleglycerol-phosphate
dehydratase		 -0.68 0.32 -0.3
56 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.68 0.31 -0.34
57 AT5G67270 end binding protein 1C MICROTUBULE END BINDING PROTEIN 1,
ATEB1-HOMOLOG1, end binding
protein 1C		 -0.68 0.3 -0.32
58 AT4G18780 cellulose synthase family protein CELLULOSE SYNTHASE 8, CELLULOSE
SYNTHASE 8, IRREGULAR XYLEM 1,
LEAF WILTING 2		 -0.68 0.34 -0.33
59 AT1G17210 IAP-like protein 1 ARABIDOPSIS IAP-LIKE PROTEIN,
IAP-like protein 1		 0.67 0.32 -0.32
60 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 0.67 0.32 -0.32
61 AT4G01390 TRAF-like family protein -0.67 0.3 -0.33
62 AT1G20640 Plant regulator RWP-RK family protein -0.67 0.32 -0.31
63 AT5G58730 pfkB-like carbohydrate kinase family protein 0.67 0.33 -0.33
64 AT3G20630 ubiquitin-specific protease 14 ATUBP14, phosphate deficiency root
hair defective1, TITAN6,
ubiquitin-specific protease 14		 0.67 0.32 -0.32
65 AT2G38460 iron regulated 1 ARABIDOPSIS THALIANA
IRON-REGULATED PROTEIN 1,
FERROPORTIN 1, iron regulated 1		 -0.67 0.29 -0.3
66 AT1G76740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G76840.1); Has 3683 Blast hits
to 2942 proteins in 407 species: Archae - 9; Bacteria -
440; Metazoa - 1472; Fungi - 269; Plants - 192; Viruses -
8; Other Eukaryotes - 1293 (source: NCBI BLink).		 -0.67 0.31 -0.32
67 AT1G09600 Protein kinase superfamily protein -0.67 0.32 -0.29
68 AT1G26600 CLAVATA3/ESR-RELATED 9 CLAVATA3/ESR-RELATED 9 -0.67 0.32 -0.32
69 AT2G44690 Arabidopsis RAC-like 9 Arabidopsis RAC-like 9,
RHO-RELATED PROTEIN FROM PLANTS 8,
RHO-RELATED PROTEIN FROM PLANTS 8		 -0.66 0.32 -0.32
70 AT4G00890 proline-rich family protein -0.66 0.3 -0.31
71 AT1G27680 ADPGLC-PPase large subunit ADPGLC-PPase large subunit -0.66 0.31 -0.32
72 AT5G42820 Zinc finger C-x8-C-x5-C-x3-H type family protein ATU2AF35B, U2AF35B 0.66 0.31 -0.34
73 AT1G66180 Eukaryotic aspartyl protease family protein 0.66 0.29 -0.32
74 AT5G04910 unknown protein; Has 71 Blast hits to 71 proteins in 36
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.66 0.33 -0.31
75 AT3G14410 Nucleotide/sugar transporter family protein 0.65 0.3 -0.33
76 AT1G04310 ethylene response sensor 2 ethylene response sensor 2 0.65 0.34 -0.3
77 AT1G69230 SPIRAL1-like2 SPIRAL1-like2 -0.65 0.3 -0.34
78 AT1G14890 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.36 -0.31
79 AT2G38010 Neutral/alkaline non-lysosomal ceramidase -0.65 0.3 -0.32
80 AT1G29660 GDSL-like Lipase/Acylhydrolase superfamily protein -0.65 0.29 -0.32
81 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 -0.65 0.31 -0.32
82 AT1G78020 Protein of unknown function (DUF581) -0.65 0.3 -0.31
83 AT3G60300 RWD domain-containing protein 0.65 0.32 -0.32
84 AT3G03380 DegP protease 7 degradation of periplasmic
proteins 7, DegP protease 7		 0.65 0.31 -0.29
85 AT3G60380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in
424 species: Archae - 6; Bacteria - 372; Metazoa - 2603;
Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes -
2147 (source: NCBI BLink).		 -0.65 0.33 -0.29
86 AT5G13280 aspartate kinase 1 ASPARTATE KINASE, aspartate kinase
1, ASPARTATE KINASE 1		 0.64 0.31 -0.3
87 AT2G44190 Family of unknown function (DUF566) ENDOSPERM DEFECTIVE 1, EMBRYO
DEFECTIVE 3116, QWRF domain
containing 5		 -0.64 0.29 -0.31
88 AT4G11080 HMG (high mobility group) box protein 3xHigh Mobility Group-box1 -0.64 0.32 -0.3
89 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 0.64 0.3 -0.29
90 AT4G21760 beta-glucosidase 47 beta-glucosidase 47 -0.64 0.33 -0.31
91 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.64 0.29 -0.32
92 AT4G34510 3-ketoacyl-CoA synthase 17 3-ketoacyl-CoA synthase 17 -0.64 0.31 -0.3
93 AT4G01950 glycerol-3-phosphate acyltransferase 3 ATGPAT3, glycerol-3-phosphate
acyltransferase 3		 -0.64 0.29 -0.3
94 AT5G05100 Single-stranded nucleic acid binding R3H protein 0.64 0.31 -0.29
95 AT4G15260 UDP-Glycosyltransferase superfamily protein 0.64 0.31 -0.32
96 AT2G20750 expansin B1 expansin B1, ATHEXP BETA 1.5,
expansin B1		 -0.64 0.3 -0.32
97 AT5G09220 amino acid permease 2 amino acid permease 2 -0.63 0.33 -0.3
98 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 0.63 0.29 -0.3
99 AT3G48990 AMP-dependent synthetase and ligase family protein 0.63 0.31 -0.32
100 AT3G63010 alpha/beta-Hydrolases superfamily protein ATGID1B, GA INSENSITIVE DWARF1B 0.63 0.3 -0.33
101 AT5G58410 HEAT/U-box domain-containing protein 0.63 0.29 -0.32
102 AT2G13430 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.3 -0.31
103 AT3G59900 auxin-regulated gene involved in organ size AUXIN-REGULATED GENE INVOLVED IN
ORGAN SIZE		 0.63 0.32 -0.33
104 AT1G53180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.63 0.31 -0.33
105 AT3G46900 copper transporter 2 copper transporter 2 -0.63 0.3 -0.32
106 AT1G49820 S-methyl-5-thioribose kinase S-methyl-5-thioribose kinase,
S-methyl-5-thioribose kinase,
5-methylthioribose kinase 1		 0.63 0.3 -0.34
107 AT5G03170 FASCICLIN-like arabinogalactan-protein 11 ARABIDOPSIS FASCICLIN-LIKE
ARABINOGALACTAN-PROTEIN 11,
FASCICLIN-like
arabinogalactan-protein 11		 -0.63 0.32 -0.33
108 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 0.63 0.32 -0.32
109 AT1G75580 SAUR-like auxin-responsive protein family 0.63 0.34 -0.3
110 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29		 -0.62 0.32 -0.32
111 AT5G07030 Eukaryotic aspartyl protease family protein -0.62 0.3 -0.31
112 AT1G20900 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 27, ESCAROLA, ORESARA 7		 0.62 0.33 -0.31
113 AT5G52250 Transducin/WD40 repeat-like superfamily protein EARLY FLOWERING BY OVEREXPRESSION
1, REPRESSOR OF UV-B
PHOTOMORPHOGENESIS 1		 0.62 0.32 -0.3
114 AT3G19370 Plant protein of unknown function (DUF869) -0.62 0.33 -0.31
115 AT2G33620 AT hook motif DNA-binding family protein -0.62 0.32 -0.31
116 AT1G76620 Protein of unknown function, DUF547 -0.62 0.29 -0.32
117 AT5G67460 O-Glycosyl hydrolases family 17 protein -0.62 0.31 -0.31
118 AT5G16250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.33 -0.32
119 AT1G64040 type one serine/threonine protein phosphatase 3 type one serine/threonine protein
phosphatase 3		 0.61 0.34 -0.3
120 AT1G21910 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 26		 0.61 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		0.76 0.48 -0.4 C0227
122 C0183 MST_3033.1 - - - -0.71 0.44 -0.47
123 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.7 0.42 -0.47 C0016
124 C0170 MST_2128.3 - - - -0.67 0.46 -0.43