AT5G17620 : -
Query Information
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AGICode AT5G17620
Description CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G17620 CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1
(InterPro:IPR010604); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 1 0.31 -0.32
2 AT4G38860 SAUR-like auxin-responsive protein family 0.84 0.32 -0.31
3 AT2G43360 Radical SAM superfamily protein BIOTIN AUXOTROPH 2, BIOTIN
AUXOTROPH B		 0.83 0.3 -0.32
4 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein -0.83 0.29 -0.32
5 AT1G17420 lipoxygenase 3 Arabidopsis thaliana lipoxygenase
3, lipoxygenase 3		 -0.83 0.33 -0.31
6 AT2G47950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G62990.1); Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.83 0.31 -0.31
7 AT5G58350 with no lysine (K) kinase 4 with no lysine (K) kinase 4, ZIK2 -0.83 0.31 -0.29
8 AT5G57780 EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12
growth stages; BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in
11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 P1R1 0.82 0.31 -0.32
9 AT3G47960 Major facilitator superfamily protein -0.82 0.33 -0.3
10 AT5G24330 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 6, SET DOMAIN PROTEIN 34		 0.81 0.32 -0.3
11 AT2G36380 pleiotropic drug resistance 6 ATP-binding cassette G34,
PLEIOTROPIC DRUG RESISTANCE 6,
pleiotropic drug resistance 6		 -0.81 0.32 -0.32
12 AT5G59870 histone H2A 6 histone H2A 6 0.81 0.3 -0.32
13 AT5G18130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.8 0.31 -0.32
14 AT3G12710 DNA glycosylase superfamily protein 0.8 0.32 -0.32
15 AT3G51400 Arabidopsis protein of unknown function (DUF241) 0.8 0.31 -0.31
16 AT5G14700 NAD(P)-binding Rossmann-fold superfamily protein -0.8 0.32 -0.31
17 AT1G31550 GDSL-like Lipase/Acylhydrolase superfamily protein -0.8 0.31 -0.3
18 AT2G06850 xyloglucan endotransglucosylase/hydrolase 4 endoxyloglucan transferase A1,
ENDOXYLOGLUCAN TRANSFERASE,
xyloglucan
endotransglucosylase/hydrolase 4		 0.8 0.31 -0.31
19 AT1G69450 Early-responsive to dehydration stress protein (ERD4) -0.8 0.31 -0.31
20 AT1G20490 AMP-dependent synthetase and ligase family protein -0.79 0.33 -0.3
21 AT5G02760 Protein phosphatase 2C family protein 0.79 0.34 -0.33
22 AT1G17745 D-3-phosphoglycerate dehydrogenase 3-phosphoglycerate dehydrogenase -0.79 0.33 -0.32
23 AT5G42810 inositol-pentakisphosphate 2-kinase 1 inositol-pentakisphosphate
2-kinase 1,
inositol-pentakisphosphate
2-kinase 1		 -0.78 0.33 -0.3
24 AT1G17020 senescence-related gene 1 SENESCENCE-RELATED GENE 1,
senescence-related gene 1		 -0.78 0.3 -0.31
25 AT1G71140 MATE efflux family protein -0.78 0.32 -0.31
26 AT3G07510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits
to 133 proteins in 14 species: Archae - 0; Bacteria - 4;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.78 0.32 -0.32
27 AT3G52850 vacuolar sorting receptor homolog 1 ARABIDOPSIS THALIANA EPIDERMAL
GROWTH FACTOR RECEPTOR-LIKE
PROTEIN, ATELP1, ATVSR1, BP-80,
BP80, binding protein of 80 kDa
1;1, BP80B, Green fluorescent seed
1, vacuolar sorting receptor
homolog 1, VACUOLAR SORTING
RECEPTOR 1;1		 -0.78 0.33 -0.28
28 AT2G35190 novel plant snare 11 ATNPSN11, novel plant snare 11,
NSPN11		 0.78 0.31 -0.29
29 AT3G61960 Protein kinase superfamily protein -0.78 0.32 -0.33
30 AT5G17860 calcium exchanger 7 calcium exchanger 7 -0.78 0.31 -0.32
31 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein -0.78 0.3 -0.29
32 AT1G52190 Major facilitator superfamily protein 0.78 0.32 -0.32
33 AT4G34760 SAUR-like auxin-responsive protein family 0.78 0.31 -0.32
34 AT1G69610 Protein of unknown function (DUF1666) -0.77 0.33 -0.32
35 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.77 0.31 -0.33
36 AT5G07590 Transducin/WD40 repeat-like superfamily protein 0.77 0.32 -0.3
37 AT5G52450 MATE efflux family protein -0.77 0.33 -0.33
38 AT4G18060 SH3 domain-containing protein 0.77 0.3 -0.33
39 AT1G21690 ATPase family associated with various cellular activities
(AAA) 		embryo defective 1968, replication
factor C 4		 0.77 0.31 -0.31
40 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.77 0.31 -0.31
41 AT1G03080 kinase interacting (KIP1-like) family protein -0.77 0.31 -0.3
42 AT4G25230 RPM1 interacting protein 2 RPM1 interacting protein 2 -0.77 0.32 -0.33
43 AT3G62840 Small nuclear ribonucleoprotein family protein 0.77 0.32 -0.34
44 AT1G30570 hercules receptor kinase 2 hercules receptor kinase 2 0.77 0.32 -0.32
45 AT4G37150 methyl esterase 9 ARABIDOPSIS THALIANA METHYL
ESTERASE 9, methyl esterase 9		 -0.77 0.3 -0.3
46 AT5G41060 DHHC-type zinc finger family protein 0.77 0.32 -0.34
47 AT1G70310 spermidine synthase 2 spermidine synthase 2 0.77 0.32 -0.31
48 AT3G06500 Plant neutral invertase family protein alkaline/neutral invertase C -0.76 0.31 -0.3
49 AT2G41510 cytokinin oxidase/dehydrogenase 1 CYTOKININ OXIDASE/DEHYDROGENASE 1,
cytokinin oxidase/dehydrogenase 1		 0.76 0.3 -0.33
50 AT2G41480 Peroxidase superfamily protein -0.76 0.32 -0.31
51 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 0.76 0.31 -0.31
52 AT3G50650 GRAS family transcription factor -0.76 0.33 -0.31
53 AT3G24982 receptor like protein 40 receptor like protein 40, receptor
like protein 40		 -0.76 0.31 -0.32
54 AT3G21230 4-coumarate:CoA ligase 5 4-coumarate:CoA ligase 5 -0.76 0.32 -0.3
55 AT4G34710 arginine decarboxylase 2 arginine decarboxylase 2, ATADC2,
SPE2		 -0.76 0.31 -0.33
56 AT3G50760 galacturonosyltransferase-like 2 galacturonosyltransferase-like 2 -0.76 0.32 -0.31
57 AT2G42110 unknown protein; Has 27 Blast hits to 27 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.76 0.34 -0.32
58 AT5G57150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.76 0.29 -0.31
59 AT2G38250 Homeodomain-like superfamily protein -0.76 0.33 -0.3
60 AT5G02540 NAD(P)-binding Rossmann-fold superfamily protein 0.76 0.28 -0.32
61 AT1G23080 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 7,
PIN-FORMED 7		 0.76 0.33 -0.31
62 AT2G47190 myb domain protein 2 MYB DOMAIN PROTEIN 2, myb domain
protein 2		 -0.76 0.31 -0.31
63 AT5G43100 Eukaryotic aspartyl protease family protein -0.75 0.3 -0.33
64 AT3G27360 Histone superfamily protein 0.75 0.3 -0.33
65 AT3G56200 Transmembrane amino acid transporter family protein -0.75 0.31 -0.29
66 AT5G65750 2-oxoglutarate dehydrogenase, E1 component -0.75 0.31 -0.3
67 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase -0.75 0.33 -0.34
68 AT3G59140 multidrug resistance-associated protein 14 ATP-binding cassette C10,
multidrug resistance-associated
protein 14, multidrug
resistance-associated protein 14		 -0.75 0.34 -0.3
69 AT1G77420 alpha/beta-Hydrolases superfamily protein -0.75 0.3 -0.32
70 AT1G17830 Protein of unknown function (DUF789) -0.75 0.3 -0.3
71 AT1G68795 CLAVATA3/ESR-RELATED 12 CLAVATA3/ESR-RELATED 12 -0.75 0.34 -0.32
72 AT2G29350 senescence-associated gene 13 senescence-associated gene 13 -0.75 0.32 -0.33
73 AT3G62590 alpha/beta-Hydrolases superfamily protein -0.75 0.3 -0.31
74 AT1G48780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits
to 89 proteins in 11 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.75 0.31 -0.32
75 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 -0.74 0.32 -0.31
76 AT1G21880 lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1
precursor		 0.74 0.32 -0.33
77 AT3G57520 seed imbibition 2 seed imbibition 2, raffinose
synthase 2, seed imbibition 2		 -0.74 0.31 -0.32
78 AT3G47060 FTSH protease 7 FTSH protease 7 -0.74 0.34 -0.31
79 AT2G39030 Acyl-CoA N-acyltransferases (NAT) superfamily protein N-acetyltransferase activity 1 -0.74 0.3 -0.31
80 AT3G56130 biotin/lipoyl attachment domain-containing protein 0.74 0.31 -0.32
81 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.31 -0.31
82 AT1G24330 ARM repeat superfamily protein -0.74 0.33 -0.31
83 AT1G63010 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1)
domain-containing protein		 -0.74 0.33 -0.32
84 AT3G51970 acyl-CoA sterol acyl transferase 1 acyl-CoA sterol acyl transferase
1, ATASAT1, ARABIDOPSIS THALIANA
STEROL O-ACYLTRANSFERASE 1		 -0.74 0.3 -0.31
85 AT3G57040 response regulator 9 response regulator 9, RESPONSE
REGULATOR 4		 0.74 0.31 -0.32
86 AT2G43510 trypsin inhibitor protein 1 trypsin inhibitor protein 1,
trypsin inhibitor protein 1		 -0.74 0.34 -0.29
87 AT1G28480 Thioredoxin superfamily protein GRX480, roxy19 -0.74 0.33 -0.28
88 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.74 0.32 -0.31
89 AT1G78280 transferases, transferring glycosyl groups -0.74 0.31 -0.32
90 AT1G09960 sucrose transporter 4 SUCROSE TRANSPORTER 4, SUCROSE
TRANSPORTER 4, SUCROSE TRANSPORTER
4, sucrose transporter 4		 -0.74 0.33 -0.32
91 AT1G68130 indeterminate(ID)-domain 14 indeterminate(ID)-domain 14,
indeterminate(ID)-domain 14,
IDD14alpha, IDD14beta		 0.74 0.29 -0.31
92 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 -0.73 0.34 -0.31
93 AT1G78670 gamma-glutamyl hydrolase 3 gamma-glutamyl hydrolase 3,
gamma-glutamyl hydrolase 3		 -0.73 0.3 -0.3
94 AT1G17380 jasmonate-zim-domain protein 5 jasmonate-zim-domain protein 5,
TIFY11A		 -0.73 0.33 -0.32
95 AT3G16860 COBRA-like protein 8 precursor COBRA-like protein 8 precursor -0.73 0.32 -0.31
96 AT3G44720 arogenate dehydratase 4 arogenate dehydratase 4 -0.73 0.3 -0.3
97 AT1G66370 myb domain protein 113 myb domain protein 113, myb domain
protein 113		 -0.73 0.3 -0.32
98 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 -0.73 0.33 -0.31
99 AT5G38530 tryptophan synthase beta type 2 tryptophan synthase beta type 2 -0.73 0.33 -0.33
100 AT5G40210 nodulin MtN21 /EamA-like transporter family protein -0.73 0.35 -0.3
101 AT4G24000 cellulose synthase like G2 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G2, cellulose
synthase like G2		 -0.73 0.33 -0.32
102 AT2G11520 calmodulin-binding receptor-like cytoplasmic kinase 3 calmodulin-binding receptor-like
cytoplasmic kinase 3		 -0.73 0.31 -0.33
103 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 -0.73 0.31 -0.3
104 AT3G13110 serine acetyltransferase 2;2 serine acetyltransferase 2;2,
SERINE ACETYLTRANSFERASE-1, SERINE
ACETYLTRANSFERASE A, SERINE
ACETYLTRANSFERASE-MITOCHONDRIAL,
SERINE ACETYLTRANSFERASE 3, serine
acetyltransferase 2;2		 -0.72 0.33 -0.32
105 AT1G17750 PEP1 receptor 2 PEP1 RECEPTOR 2, PEP1 receptor 2 -0.72 0.33 -0.32
106 AT5G13320 Auxin-responsive GH3 family protein GH3-LIKE DEFENSE GENE 1, GRETCHEN
HAGEN 3.12, AVRPPHB SUSCEPTIBLE 3,
HOPW1-1-INTERACTING 3		 -0.72 0.33 -0.3
107 AT2G39310 jacalin-related lectin 22 jacalin-related lectin 22 -0.72 0.3 -0.31
108 AT1G61120 terpene synthase 04 GERANYLLINALOOL SYNTHASE, terpene
synthase 04, TERPENE SYNTHASE 4		 -0.72 0.34 -0.32
109 AT3G11840 plant U-box 24 plant U-box 24 -0.72 0.33 -0.32
110 AT5G15730 Protein kinase superfamily protein AtCRLK2,
calcium/calmodulin-regulated
receptor-like kinase 2		 -0.72 0.34 -0.31
111 AT3G22550 Protein of unknown function (DUF581) -0.72 0.3 -0.31
112 AT4G02360 Protein of unknown function, DUF538 -0.72 0.32 -0.3
113 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 -0.72 0.31 -0.31
114 AT2G39420 alpha/beta-Hydrolases superfamily protein -0.72 0.3 -0.31
115 AT2G05710 aconitase 3 aconitase 3 -0.72 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) -0.79 0.46 -0.45 C0131