AT5G16060 : -
Query Information
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AGICode AT5G16060
Description Cytochrome c oxidase biogenesis protein Cmc1-like
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G16060 Cytochrome c oxidase biogenesis protein Cmc1-like 1 0.31 -0.31
2 AT1G79390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.87 0.31 -0.32
3 AT3G62810 complex 1 family protein / LVR family protein 0.82 0.33 -0.27
4 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 0.81 0.32 -0.29
5 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.81 0.29 -0.31
6 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 0.8 0.3 -0.3
7 AT3G48570 secE/sec61-gamma protein transport protein 0.79 0.32 -0.33
8 AT2G30970 aspartate aminotransferase 1 aspartate aminotransferase 1 0.79 0.31 -0.31
9 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 0.78 0.3 -0.32
10 AT1G15120 Ubiquinol-cytochrome C reductase hinge protein 0.78 0.31 -0.32
11 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.78 0.34 -0.31
12 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.77 0.33 -0.31
13 AT4G00585 unknown protein; Has 47 Blast hits to 47 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7;
Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.77 0.3 -0.31
14 AT5G66510 gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 0.77 0.31 -0.32
15 AT1G19130 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold
(InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins
in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19;
Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes -
304 (source: NCBI BLink).		 0.77 0.33 -0.3
16 AT3G20920 translocation protein-related 0.76 0.32 -0.33
17 AT3G10860 Cytochrome b-c1 complex, subunit 8 protein 0.76 0.3 -0.31
18 AT5G13420 Aldolase-type TIM barrel family protein 0.76 0.33 -0.3
19 AT2G47380 Cytochrome c oxidase subunit Vc family protein 0.75 0.29 -0.33
20 AT5G56590 O-Glycosyl hydrolases family 17 protein -0.75 0.35 -0.31
21 AT3G03600 ribosomal protein S2 ribosomal protein S2 0.75 0.33 -0.32
22 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.75 0.32 -0.32
23 AT3G63300 FORKED 1 FORKED 1 -0.75 0.31 -0.32
24 AT5G20080 FAD/NAD(P)-binding oxidoreductase 0.74 0.33 -0.31
25 AT1G66200 glutamine synthase clone F11 glutamine synthase clone F11,
glutamine synthetase 1;2,
glutamine synthase clone F11		 0.74 0.29 -0.32
26 AT3G28480 Oxoglutarate/iron-dependent oxygenase 0.74 0.32 -0.3
27 AT4G33360 NAD(P)-binding Rossmann-fold superfamily protein farnesol dehydrogenase 0.74 0.3 -0.32
28 AT4G11120 translation elongation factor Ts (EF-Ts), putative 0.73 0.31 -0.31
29 AT4G22150 plant UBX domain-containing protein 3 plant UBX domain-containing
protein 3		 0.73 0.32 -0.31
30 AT3G20510 Transmembrane proteins 14C 0.73 0.32 -0.31
31 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.73 0.3 -0.31
32 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.29 -0.32
33 AT1G73570 HCP-like superfamily protein -0.73 0.3 -0.3
34 AT4G29480 Mitochondrial ATP synthase subunit G protein 0.72 0.31 -0.31
35 AT3G20150 Kinesin motor family protein -0.72 0.3 -0.31
36 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 -0.72 0.33 -0.31
37 AT1G48140 dolichol-phosphate mannosyltransferase-related dolichol phosphate mannose
synthase 3		 0.72 0.3 -0.32
38 AT1G79550 phosphoglycerate kinase phosphoglycerate kinase 0.72 0.31 -0.31
39 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.72 0.32 -0.3
40 AT1G70550 Protein of Unknown Function (DUF239) -0.72 0.32 -0.34
41 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.72 0.31 -0.32
42 AT5G52840 NADH-ubiquinone oxidoreductase-related 0.72 0.32 -0.33
43 AT5G61220 LYR family of Fe/S cluster biogenesis protein 0.72 0.36 -0.29
44 AT2G20210 RNI-like superfamily protein -0.72 0.3 -0.29
45 AT5G36880 acetyl-CoA synthetase acetyl-CoA synthetase 0.72 0.31 -0.33
46 AT3G08640 Protein of unknown function (DUF3411) 0.71 0.31 -0.35
47 AT3G57280 Transmembrane proteins 14C 0.71 0.32 -0.33
48 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.71 0.32 -0.31
49 AT3G50780 BEST Arabidopsis thaliana protein match is: BTB/POZ
domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast
hits to 298 proteins in 22 species: Archae - 0; Bacteria -
0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink).		 -0.71 0.32 -0.32
50 AT1G27850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G40070.1); Has 9215
Blast hits to 5316 proteins in 473 species: Archae - 6;
Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539;
Viruses - 143; Other Eukaryotes - 2652 (source: NCBI
BLink).		 -0.71 0.3 -0.31
51 AT2G16060 hemoglobin 1 hemoglobin 1, ARATH GLB1, ATGLB1,
CLASS I HEMOGLOBIN, hemoglobin 1,
NSHB1		 0.7 0.31 -0.31
52 AT5G03320 Protein kinase superfamily protein 0.7 0.31 -0.32
53 AT4G10180 light-mediated development protein 1 / deetiolated1 (DET1) ATDET1, DE-ETIOLATED 1, FUSCA 2 -0.7 0.31 -0.34
54 AT5G53540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.32 -0.34
55 AT5G16470 zinc finger (C2H2 type) family protein 0.7 0.32 -0.31
56 AT3G54110 plant uncoupling mitochondrial protein 1 ARABIDOPSIS THALIANA PLANT
UNCOUPLING MITOCHONDRIAL PROTEIN
1, ARABIDOPSIS THALIANA UNCOUPLING
PROTEIN 1, plant uncoupling
mitochondrial protein 1, UCP,
UNCOUPLING PROTEIN 1		 0.7 0.31 -0.3
57 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.7 0.3 -0.31
58 AT4G25900 Galactose mutarotase-like superfamily protein 0.69 0.29 -0.33
59 AT3G30300 O-fucosyltransferase family protein -0.69 0.31 -0.31
60 AT3G15095 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 9762 Blast hits to 6439
proteins in 764 species: Archae - 77; Bacteria - 1339;
Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131;
Other Eukaryotes - 3849 (source: NCBI BLink).		 high chlorophyll fluorescence 243 -0.69 0.33 -0.33
61 AT1G01790 K+ efflux antiporter 1 K+ EFFLUX ANTIPORTER 1, K+ efflux
antiporter 1		 -0.69 0.32 -0.31
62 AT2G16660 Major facilitator superfamily protein 0.69 0.34 -0.31
63 AT2G46380 Protein of unknown function (DUF3133) -0.69 0.33 -0.33
64 AT1G53530 Peptidase S24/S26A/S26B/S26C family protein 0.69 0.34 -0.29
65 AT5G44390 FAD-binding Berberine family protein 0.69 0.33 -0.32
66 AT5G56360 calmodulin-binding protein PRIORITY IN SWEET LIFE 4 0.69 0.29 -0.32
67 AT4G26790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.69 0.33 -0.31
68 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 0.69 0.32 -0.29
69 AT5G63000 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.69 0.31 -0.33
70 AT3G56370 Leucine-rich repeat protein kinase family protein -0.69 0.28 -0.34
71 AT1G10640 Pectin lyase-like superfamily protein -0.68 0.3 -0.31
72 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.68 0.34 -0.32
73 AT3G25670 Leucine-rich repeat (LRR) family protein -0.68 0.31 -0.3
74 AT5G64120 Peroxidase superfamily protein 0.68 0.32 -0.32
75 AT3G03420 Ku70-binding family protein 0.68 0.31 -0.3
76 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.3 -0.32
77 AT4G11010 nucleoside diphosphate kinase 3 nucleoside diphosphate kinase 3 0.68 0.33 -0.32
78 AT3G22425 imidazoleglycerol-phosphate dehydratase HISN5A,
imidazoleglycerol-phosphate
dehydratase		 -0.68 0.31 -0.32
79 AT2G25570 binding 0.68 0.32 -0.31
80 AT5G04390 C2H2-type zinc finger family protein 0.68 0.32 -0.34
81 AT3G58180 ARM repeat superfamily protein 0.68 0.32 -0.31
82 AT4G08460 Protein of unknown function (DUF1644) 0.68 0.3 -0.34
83 AT3G61670 Protein of unknown function (DUF3133) -0.68 0.29 -0.31
84 AT5G38630 cytochrome B561-1 cytochrome B561-1, cytochrome
B561-1		 0.67 0.31 -0.32
85 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 0.67 0.32 -0.34
86 AT5G09450 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.29 -0.32
87 AT3G01640 glucuronokinase G ARABIDOPSIS THALIANA
GLUCURONOKINASE, glucuronokinase G		 0.67 0.32 -0.31
88 AT5G12170 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance
transporter)-like transporter 3		 0.67 0.32 -0.31
89 AT3G10080 RmlC-like cupins superfamily protein -0.67 0.32 -0.31
90 AT3G01960 unknown protein; Has 13 Blast hits to 13 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.31
91 AT2G18390 ADP-ribosylation factor family protein ARF-LIKE 2, ATARLC1, HALLIMASCH,
TITAN 5		 0.67 0.32 -0.32
92 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.67 0.34 -0.33
93 AT1G49820 S-methyl-5-thioribose kinase S-methyl-5-thioribose kinase,
S-methyl-5-thioribose kinase,
5-methylthioribose kinase 1		 0.67 0.31 -0.31
94 AT4G17070 peptidyl-prolyl cis-trans isomerases 0.67 0.33 -0.32
95 AT3G50240 ATP binding microtubule motor family protein KICP-02 -0.66 0.29 -0.31
96 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.66 0.33 -0.32
97 AT3G20330 PYRIMIDINE B PYRIMIDINE B 0.66 0.31 -0.32
98 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.66 0.31 -0.3
99 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.66 0.31 -0.31
100 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.31 -0.33
101 AT5G13290 Protein kinase superfamily protein CORYNE, SUPPRESSOR OF LLP1 2 -0.66 0.33 -0.32
102 AT1G01900 subtilase family protein ATSBT1.1, SBTI1.1 -0.66 0.33 -0.31
103 AT1G54350 ABC transporter family protein ATP-binding cassette D2 -0.66 0.31 -0.31
104 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 -0.66 0.32 -0.3
105 AT1G75310 auxin-like 1 protein auxilin-like 1 -0.65 0.3 -0.3
106 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SILENCING DEFECTIVE -0.65 0.31 -0.32
107 AT1G26150 proline-rich extensin-like receptor kinase 10 proline-rich extensin-like
receptor kinase 10, proline-rich
extensin-like receptor kinase 10		 -0.64 0.34 -0.32
108 AT1G15080 lipid phosphate phosphatase 2 LIPID PHOSPHATE PHOSPHATASE 2,
PHOSPHATIDIC ACID PHOSPHATASE 2,
lipid phosphate phosphatase 2		 -0.64 0.31 -0.3
109 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 -0.64 0.31 -0.3
110 AT2G45340 Leucine-rich repeat protein kinase family protein -0.64 0.32 -0.33
111 AT1G24290 AAA-type ATPase family protein -0.64 0.31 -0.32
112 AT1G49890 Family of unknown function (DUF566) QWRF domain containing 2 -0.64 0.32 -0.3
113 AT5G44180 Homeodomain-like transcriptional regulator -0.63 0.31 -0.32
114 AT5G57100 Nucleotide/sugar transporter family protein -0.63 0.31 -0.31
115 AT2G33440 RNA-binding (RRM/RBD/RNP motifs) family protein -0.63 0.31 -0.34
116 AT5G01890 Leucine-rich receptor-like protein kinase family protein -0.63 0.32 -0.32
117 AT5G20840 Phosphoinositide phosphatase family protein -0.63 0.31 -0.3
118 AT2G46530 auxin response factor 11 auxin response factor 11 -0.63 0.29 -0.33
119 AT4G14150 phragmoplast-associated kinesin-related protein 1 KINESIN-12A,
phragmoplast-associated
kinesin-related protein 1		 -0.63 0.33 -0.3
120 AT2G04850 Auxin-responsive family protein -0.63 0.35 -0.3
121 AT4G03010 RNI-like superfamily protein -0.63 0.29 -0.3
122 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.62 0.33 -0.31
123 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.62 0.31 -0.31
124 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 -0.62 0.32 -0.31
125 AT3G61250 myb domain protein 17 myb domain protein 17, LATE
MERISTEM IDENTITY2, myb domain
protein 17		 -0.62 0.31 -0.31
126 AT2G27740 Family of unknown function (DUF662) -0.62 0.35 -0.33
127 AT2G32100 ovate family protein 16 RABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 16, ovate family protein
16		 -0.62 0.33 -0.31
128 AT4G09150 T-complex protein 11 -0.62 0.31 -0.3
129 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.62 0.32 -0.34
130 AT5G58300 Leucine-rich repeat protein kinase family protein -0.61 0.32 -0.32
131 AT5G35970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.29 -0.29
132 AT5G35170 adenylate kinase family protein -0.6 0.31 -0.29
133 AT1G77490 thylakoidal ascorbate peroxidase thylakoidal ascorbate peroxidase -0.6 0.31 -0.31
134 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 -0.6 0.32 -0.32
135 AT3G45680 Major facilitator superfamily protein -0.6 0.3 -0.32
136 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.6 0.32 -0.29
137 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).		 -0.6 0.3 -0.3
138 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 -0.6 0.33 -0.32
139 AT5G38150 Plant protein of unknown function (DUF827) plastid movement impaired 15 -0.6 0.33 -0.32
140 AT3G01670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits
to 111 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 sieve element occlusion a -0.6 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
141 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.88 0.46 -0.46 C0266
142 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		-0.84 0.42 -0.5 C0063
143 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.73 0.51 -0.5 C0248
144 C0212 PR_MST_2336.8 - - - -0.69 0.45 -0.49
145 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis 		-0.67 0.44 -0.47