AT5G16715 : embryo defective 2247
Query Information
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AGICode AT5G16715
Description ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 1 0.3 -0.31
2 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.91 0.3 -0.32
3 AT2G14880 SWIB/MDM2 domain superfamily protein 0.89 0.31 -0.34
4 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.89 0.34 -0.31
5 AT5G08650 Small GTP-binding protein 0.89 0.3 -0.3
6 AT3G44890 ribosomal protein L9 ribosomal protein L9 0.89 0.32 -0.31
7 AT2G45270 glycoprotease 1 glycoprotease 1 0.88 0.31 -0.33
8 AT4G39460 S-adenosylmethionine carrier 1 S-adenosylmethionine carrier 1,
SAM TRANSPORTER1		 0.88 0.32 -0.32
9 AT3G12080 GTP-binding family protein embryo defective 2738 0.88 0.31 -0.31
10 AT2G24060 Translation initiation factor 3 protein 0.88 0.3 -0.31
11 AT1G29070 Ribosomal protein L34 0.88 0.32 -0.32
12 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.87 0.33 -0.31
13 AT3G25660 Amidase family protein 0.87 0.31 -0.35
14 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.87 0.33 -0.32
15 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.86 0.31 -0.31
16 AT3G03710 polyribonucleotide nucleotidyltransferase, putative PIGMENT DEFECTIVE 326,
POLYNUCLEOTIDE PHOSPHORYLASE,
resistant to inhibition with FSM
10		 0.86 0.33 -0.31
17 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.86 0.35 -0.33
18 AT1G05385 photosystem II 11 kDa protein-related LOW PSII ACCUMULATION 19, Psb27-H1 0.86 0.31 -0.28
19 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 0.86 0.3 -0.34
20 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.29 -0.3
21 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.86 0.32 -0.31
22 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.86 0.32 -0.33
23 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.86 0.32 -0.33
24 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.86 0.31 -0.32
25 AT3G60750 Transketolase 0.85 0.32 -0.32
26 AT4G30720 FAD/NAD(P)-binding oxidoreductase family protein PIGMENT DEFECTIVE 327 0.85 0.3 -0.32
27 AT1G53800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits
to 882 proteins in 242 species: Archae - 2; Bacteria - 216;
Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other
Eukaryotes - 493 (source: NCBI BLink).		 0.85 0.31 -0.32
28 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.85 0.31 -0.34
29 AT3G48500 Nucleic acid-binding, OB-fold-like protein PIGMENT DEFECTIVE 312, PLASTID
TRANSCRIPTIONALLY ACTIVE 10		 0.85 0.33 -0.3
30 AT4G01610 Cysteine proteinases superfamily protein -0.84 0.32 -0.34
31 AT1G11870 Seryl-tRNA synthetase ATSRS, ovule abortion 7,
Seryl-tRNA synthetase		 0.84 0.3 -0.33
32 AT3G21300 RNA methyltransferase family protein 0.84 0.32 -0.31
33 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.84 0.28 -0.32
34 AT4G19710 aspartate kinase-homoserine dehydrogenase ii ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase ii		 0.84 0.3 -0.31
35 AT1G73090 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.31 -0.31
36 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.83 0.36 -0.34
37 AT3G49650 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.83 0.32 -0.32
38 AT2G34060 Peroxidase superfamily protein 0.83 0.31 -0.32
39 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.83 0.31 -0.32
40 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 0.83 0.3 -0.31
41 AT3G16260 tRNAse Z4 tRNAse Z4 0.83 0.33 -0.33
42 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.82 0.33 -0.34
43 AT2G41990 CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant
protein, group 2 (InterPro:IPR004864); BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.32 -0.31
44 AT3G14060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits
to 30 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.82 0.32 -0.33
45 AT3G04340 FtsH extracellular protease family embryo defective 2458 0.82 0.33 -0.3
46 AT2G45850 AT hook motif DNA-binding family protein 0.82 0.29 -0.33
47 AT4G22820 A20/AN1-like zinc finger family protein -0.82 0.33 -0.32
48 AT2G25840 Nucleotidylyl transferase superfamily protein ovule abortion 4 0.82 0.32 -0.33
49 AT1G10910 Pentatricopeptide repeat (PPR) superfamily protein EMBRYO DEFECTIVE 3103 0.82 0.3 -0.31
50 AT1G33810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.82 0.32 -0.29
51 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 0.82 0.29 -0.35
52 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.81 0.31 -0.31
53 AT3G03630 cysteine synthase 26 cysteine synthase 26 0.81 0.3 -0.32
54 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.81 0.3 -0.31
55 AT5G17670 alpha/beta-Hydrolases superfamily protein 0.81 0.3 -0.32
56 AT1G06950 translocon at the inner envelope membrane of chloroplasts
110		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE INNER ENVELOPE MEMBRANE OF
CHLOROPLASTS 110, translocon at
the inner envelope membrane of
chloroplasts 110		 0.81 0.32 -0.31
57 AT3G58830 haloacid dehalogenase (HAD) superfamily protein 0.81 0.33 -0.32
58 AT3G17820 glutamine synthetase 1.3 ARABIDOPSIS THALIANA GLUTAMINE
SYNTHASE CLONE KB6, glutamine
synthetase 1.3, GLUTAMINE
SYNTHETASE 1;3		 -0.81 0.32 -0.3
59 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.8 0.3 -0.31
60 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 -0.8 0.33 -0.32
61 AT2G02390 glutathione S-transferase zeta 1 glutathione S-transferase zeta 1,
GLUTATHIONE S-TRANSFERASE 18,
glutathione S-transferase zeta 1		 -0.79 0.33 -0.3
62 AT5G57910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.79 0.31 -0.29
63 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.79 0.31 -0.3
64 AT1G02850 beta glucosidase 11 beta glucosidase 11 -0.78 0.3 -0.32
65 AT5G05110 Cystatin/monellin family protein -0.78 0.32 -0.33
66 AT2G42790 citrate synthase 3 citrate synthase 3 -0.78 0.32 -0.31
67 AT4G34180 Cyclase family protein -0.78 0.29 -0.32
68 AT1G54100 aldehyde dehydrogenase 7B4 aldehyde dehydrogenase 7B4 -0.78 0.32 -0.3
69 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.78 0.32 -0.31
70 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.77 0.32 -0.33
71 AT4G39955 alpha/beta-Hydrolases superfamily protein -0.77 0.3 -0.32
72 AT4G37310 cytochrome P450, family 81, subfamily H, polypeptide 1 cytochrome P450, family 81,
subfamily H, polypeptide 1		 -0.76 0.32 -0.29
73 AT1G26690 emp24/gp25L/p24 family/GOLD family protein -0.76 0.33 -0.34
74 AT5G54300 Protein of unknown function (DUF761) -0.76 0.31 -0.3
75 AT3G51430 Calcium-dependent phosphotriesterase superfamily protein STRICTOSIDINE SYNTHASE-LIKE 5,
YELLOW-LEAF-SPECIFIC GENE 2		 -0.76 0.31 -0.31
76 AT2G01350 quinolinate phoshoribosyltransferase quinolinate
phoshoribosyltransferase		 -0.75 0.31 -0.31
77 AT3G23600 alpha/beta-Hydrolases superfamily protein -0.75 0.31 -0.32
78 AT3G14620 cytochrome P450, family 72, subfamily A, polypeptide 8 cytochrome P450, family 72,
subfamily A, polypeptide 8		 -0.75 0.29 -0.3
79 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.74 0.32 -0.33
80 AT3G22200 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 GAMMA-AMINOBUTYRATE TRANSAMINASE,
HEXENAL RESPONSE1, POLLEN-PISTIL
INCOMPATIBILITY 2		 -0.74 0.31 -0.32
81 AT2G04400 Aldolase-type TIM barrel family protein -0.74 0.31 -0.32
82 AT1G71080 RNA polymerase II transcription elongation factor -0.74 0.3 -0.31
83 AT5G06870 polygalacturonase inhibiting protein 2 ARABIDOPSIS POLYGALACTURONASE
INHIBITING PROTEIN 2,
polygalacturonase inhibiting
protein 2		 -0.74 0.3 -0.31
84 AT3G28950 AIG2-like (avirulence induced gene) family protein -0.74 0.28 -0.34
85 AT5G65020 annexin 2 annexin 2 -0.74 0.33 -0.32
86 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 -0.73 0.31 -0.3
87 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.73 0.31 -0.31
88 AT4G31500 cytochrome P450, family 83, subfamily B, polypeptide 1 ALTERED TRYPTOPHAN REGULATION 4,
cytochrome P450, family 83,
subfamily B, polypeptide 1, RED
ELONGATED 1, RUNT 1, SUPERROOT 2		 -0.73 0.29 -0.33
89 AT1G69410 eukaryotic elongation factor 5A-3 EUKARYOTIC ELONGATION FACTOR 5A-3,
eukaryotic elongation factor 5A-3		 -0.73 0.33 -0.31
90 AT5G43580 Serine protease inhibitor, potato inhibitor I-type family
protein		 UNUSUAL SERINE PROTEASE INHIBITOR -0.73 0.3 -0.31
91 AT1G55920 serine acetyltransferase 2;1 serine acetyltransferase 2;1,
SERINE ACETYLTRANSFERASE 1, SERINE
ACETYLTRANSFERASE 5, serine
acetyltransferase 2;1		 -0.73 0.31 -0.31
92 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.73 0.31 -0.3
93 AT3G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.3 -0.32
94 AT2G43510 trypsin inhibitor protein 1 trypsin inhibitor protein 1,
trypsin inhibitor protein 1		 -0.73 0.31 -0.33
95 AT1G54030 GDSL-like Lipase/Acylhydrolase superfamily protein GOLGI DEFECTS 36, MODIFIED VACUOLE
PHENOTYPE 1		 -0.73 0.33 -0.33
96 AT4G37870 phosphoenolpyruvate carboxykinase 1 phosphoenolpyruvate carboxykinase
1, PHOSPHOENOLPYRUVATE
CARBOXYKINASE		 -0.73 0.3 -0.3
97 AT1G17745 D-3-phosphoglycerate dehydrogenase 3-phosphoglycerate dehydrogenase -0.73 0.3 -0.3
98 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.73 0.32 -0.34
99 AT2G24200 Cytosol aminopeptidase family protein -0.73 0.3 -0.3
100 AT5G04750 F1F0-ATPase inhibitor protein, putative -0.72 0.32 -0.3
101 AT3G23570 alpha/beta-Hydrolases superfamily protein -0.71 0.33 -0.34
102 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.71 0.31 -0.33
103 AT4G34230 cinnamyl alcohol dehydrogenase 5 cinnamyl alcohol dehydrogenase 5,
cinnamyl alcohol dehydrogenase 5,
cinnamyl alcohol dehydrogenase 5		 -0.71 0.32 -0.32
104 AT3G62580 Late embryogenesis abundant protein (LEA) family protein -0.71 0.31 -0.31
105 AT1G23800 aldehyde dehydrogenase 2B7 aldehyde dehydrogenase 2B,
aldehyde dehydrogenase 2B7		 -0.71 0.32 -0.34
106 AT1G13280 allene oxide cyclase 4 allene oxide cyclase 4 -0.71 0.31 -0.31
107 AT5G61640 peptidemethionine sulfoxide reductase 1 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE A1,
peptidemethionine sulfoxide
reductase 1		 -0.71 0.33 -0.29
108 AT1G55020 lipoxygenase 1 ARABIDOPSIS LIPOXYGENASE 1,
lipoxygenase 1		 -0.71 0.3 -0.33
109 AT5G10300 methyl esterase 5 AtHNL, ARABIDOPSIS THALIANA METHYL
ESTERASE 5, HYDROXYNITRILE LYASE,
methyl esterase 5		 -0.71 0.33 -0.33
110 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.71 0.31 -0.29
111 AT4G29210 gamma-glutamyl transpeptidase 4 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 -0.71 0.32 -0.31
112 AT1G62660 Glycosyl hydrolases family 32 protein -0.7 0.31 -0.31
113 AT1G54990 alpha/beta-Hydrolases superfamily protein AUXIN RESISTANT 4, REDUCED ROOT
GRAVITROPISM, REDUCED ROOT
GRAVITROPISM 1		 -0.7 0.31 -0.31