AGICode | AT5G15010 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G15010 | Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | 0.31 | -0.31 | |||
2 | AT4G19670 | RING/U-box superfamily protein | -0.73 | 0.32 | -0.31 | |||
3 | AT4G27930 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.33 | -0.33 | |||
4 | AT5G02820 | Spo11/DNA topoisomerase VI, subunit A protein | BRASSINOSTEROID INSENSITIVE 5, ROOT HAIRLESS 2 |
0.7 | 0.3 | -0.3 | ||
5 | AT5G49500 | Signal recognition particle, SRP54 subunit protein | -0.7 | 0.35 | -0.3 | |||
6 | AT5G09740 | histone acetyltransferase of the MYST family 2 | histone acetyltransferase of the MYST family 2 |
-0.69 | 0.3 | -0.32 | ||
7 | AT1G25320 | Leucine-rich repeat protein kinase family protein | 0.66 | 0.3 | -0.31 | |||
8 | AT2G15510 | transposable element gene | 0.64 | 0.31 | -0.3 | |||
9 | AT3G24010 | RING/FYVE/PHD zinc finger superfamily protein | ARABIDOPSIS THALIANA INHIBITOR OF GROWTH 1, INHIBITOR OF GROWTH 1 |
-0.63 | 0.32 | -0.32 | ||
10 | AT2G35030 | Pentatricopeptide repeat (PPR) superfamily protein | 0.63 | 0.31 | -0.31 | |||
11 | AT4G20420 | Tapetum specific protein TAP35/TAP44 | -0.63 | 0.3 | -0.31 | |||
12 | AT3G05250 | RING/U-box superfamily protein | -0.63 | 0.31 | -0.33 | |||
13 | AT5G27810 | MADS-box transcription factor family protein | -0.63 | 0.32 | -0.29 | |||
14 | AT3G02400 | SMAD/FHA domain-containing protein | 0.62 | 0.32 | -0.32 | |||
15 | AT5G11910 | alpha/beta-Hydrolases superfamily protein | -0.62 | 0.3 | -0.31 | |||
16 | AT3G23130 | C2H2 and C2HC zinc fingers superfamily protein | FLORAL DEFECTIVE 10, FLORAL ORGAN NUMBER 1, SUPERMAN |
-0.62 | 0.33 | -0.3 | ||
17 | AT5G44280 | RING 1A | ARABIDOPSIS THALIANA RING 1A, RING 1A |
0.61 | 0.29 | -0.32 | ||
18 | AT1G25375 | Metallo-hydrolase/oxidoreductase superfamily protein | -0.61 | 0.31 | -0.32 | |||
19 | AT3G28400 | transposable element gene | -0.61 | 0.31 | -0.3 | |||
20 | AT3G16550 | DEGP protease 12 | DEGP protease 12 | 0.6 | 0.31 | -0.3 | ||
21 | AT4G17370 | Oxidoreductase family protein | -0.6 | 0.32 | -0.31 | |||
22 | AT2G29250 | Concanavalin A-like lectin protein kinase family protein | -0.59 | 0.34 | -0.31 | |||
23 | AT1G73400 | Pentatricopeptide repeat (PPR) superfamily protein | 0.59 | 0.31 | -0.32 | |||
24 | AT2G44170 | pseudogene, myristoyl-CoA:protein N-myristoyltransferase (NMT), putative, similar to N-myristoyltransferase 1 (NMT1) (Arabidopsis thaliana) GI:7339834; contains Pfam profiles PF01233: Myristoyl-CoA:protein N-myristoyltransferase N-terminal domain, PF02799: Myristoyl-CoA:protein N-myristoyltransferase C-terminal domain; gene contains a frameshift. This could be a pseudogene or a sequencing error.; blastp match of 62% identity and 5.1e-121 P-value to GP|20804654|dbj|BAB92343.1||AP003273 putative N-myristoyl transferase {Oryza sativa (japonica cultivar-group)} |
ARABIDOPSIS N-MYRISTOYLTRANSFERASE 2, N-myristoyltransferase 2 |
0.59 | 0.32 | -0.32 | ||
25 | AT2G18060 | vascular related NAC-domain protein 1 | Arabidopsis NAC domain containing protein 37, vascular related NAC-domain protein 1 |
0.58 | 0.29 | -0.3 | ||
26 | AT2G17910 | transposable element gene | 0.58 | 0.31 | -0.3 | |||
27 | AT2G06310 | transposable element gene | -0.58 | 0.32 | -0.34 | |||
28 | AT3G02940 | myb domain protein 107 | myb domain protein 107, myb domain protein 107 |
0.58 | 0.3 | -0.3 | ||
29 | AT1G07380 | Neutral/alkaline non-lysosomal ceramidase | -0.58 | 0.33 | -0.3 | |||
30 | AT4G15755 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.57 | 0.34 | -0.32 | |||
31 | AT4G04320 | malonyl-CoA decarboxylase family protein | -0.57 | 0.33 | -0.3 | |||
32 | AT5G09280 | Pectin lyase-like superfamily protein | -0.57 | 0.31 | -0.3 | |||
33 | AT1G48940 | early nodulin-like protein 6 | AtENODL6, early nodulin-like protein 6 |
-0.57 | 0.31 | -0.31 | ||
34 | AT3G49920 | voltage dependent anion channel 5 | ARABIDOPSIS THALIANA VOLTAGE DEPENDENT ANION CHANNEL 5, voltage dependent anion channel 5 |
-0.57 | 0.31 | -0.31 | ||
35 | AT1G63470 | AT hook motif DNA-binding family protein | 0.57 | 0.3 | -0.3 | |||
36 | AT5G38580 | FBD-like domain family protein | -0.56 | 0.31 | -0.32 | |||
37 | AT5G62320 | myb domain protein 99 | myb domain protein 99, ATMYBCU15, myb domain protein 99 |
0.56 | 0.33 | -0.29 | ||
38 | AT3G53570 | FUS3-complementing gene 1 | FUS3-complementing gene 1, AME2, FUS3-complementing gene 1 |
-0.56 | 0.33 | -0.32 | ||
39 | AT5G18000 | VERDANDI | VERDANDI | -0.56 | 0.3 | -0.32 | ||
40 | AT3G54860 | Sec1/munc18-like (SM) proteins superfamily | ATVPS33, VACUOLAR PROTEIN SORTING 33 |
-0.56 | 0.33 | -0.3 | ||
41 | AT2G20170 | Protein of Unknown Function (DUF239) | 0.56 | 0.31 | -0.32 | |||
42 | AT5G06130 | chaperone protein dnaJ-related | -0.56 | 0.28 | -0.35 | |||
43 | AT3G15220 | Protein kinase superfamily protein | -0.56 | 0.31 | -0.32 | |||
44 | AT5G24440 | CTC-interacting domain 13 | CTC-interacting domain 13 | -0.55 | 0.31 | -0.3 | ||
45 | AT2G18930 | unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.31 | -0.33 | |||
46 | AT3G56460 | GroES-like zinc-binding alcohol dehydrogenase family protein |
-0.55 | 0.34 | -0.3 | |||
47 | AT5G41490 | F-box associated ubiquitination effector family protein | -0.54 | 0.32 | -0.31 | |||
48 | AT1G21550 | Calcium-binding EF-hand family protein | -0.54 | 0.31 | -0.33 | |||
49 | AT3G61010 | Ferritin/ribonucleotide reductase-like family protein | -0.54 | 0.32 | -0.33 | |||
50 | AT3G55060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). |
0.54 | 0.32 | -0.31 | |||
51 | AT1G64960 | ARM repeat superfamily protein | hypersensitive to excess boron 1 | 0.54 | 0.31 | -0.31 | ||
52 | AT4G18180 | Pectin lyase-like superfamily protein | 0.54 | 0.32 | -0.31 | |||
53 | AT2G31690 | alpha/beta-Hydrolases superfamily protein | 0.53 | 0.31 | -0.31 | |||
54 | AT5G46320 | MADS-box family protein | -0.53 | 0.32 | -0.32 | |||
55 | AT5G53840 | F-box/RNI-like/FBD-like domains-containing protein | -0.53 | 0.35 | -0.3 | |||
56 | AT4G15230 | pleiotropic drug resistance 2 | ATP-binding cassette G30, ATPDR2, pleiotropic drug resistance 2 |
0.52 | 0.32 | -0.33 | ||
57 | AT2G39090 | tetratricopeptide repeat (TPR)-containing protein | anaphase-promoting complex 7, AtAPC7 |
-0.52 | 0.32 | -0.32 | ||
58 | AT3G09140 | Protein of unknown function (DUF674) | -0.52 | 0.31 | -0.33 | |||
59 | AT4G15250 | B-box type zinc finger protein with CCT domain | -0.52 | 0.31 | -0.32 | |||
60 | AT5G46940 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.52 | 0.33 | -0.33 | |||
61 | AT1G22010 | unknown protein; Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.52 | 0.34 | -0.31 | |||
62 | AT3G26085 | CAAX amino terminal protease family protein | -0.51 | 0.33 | -0.32 | |||
63 | AT5G07660 | structural maintenance of chromosomes 6A | structural maintenance of chromosomes 6A |
-0.51 | 0.3 | -0.33 | ||
64 | AT5G46150 | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein |
-0.51 | 0.32 | -0.32 | |||
65 | AT1G34240 | transposable element gene | -0.51 | 0.32 | -0.32 | |||
66 | AT3G59180 | Protein with RNI-like/FBD-like domains | -0.51 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
67 | C0247 | Sulfoquinovosyldiacylglycerol-34:3 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.79 | 0.47 | -0.53 | ||
68 | C0199 | Phosphatidylethanolamine-36:6 | - | Phosphatidylethanolamine-36:6 | phospholipid biosynthesis II, linoleate biosynthesis I, phosphatidylethanolamine biosynthesis I, phosphatidylethanolamine biosynthesis II, glutathione redox reactions I |
0.78 | 0.49 | -0.53 | ||
69 | C0251 | Sulfoquinovosyldiacylglycerol-36:6 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.77 | 0.53 | -0.47 | ||
70 | C0208 | Phosphatidylinositol-34:2 | - | Phosphatidylinositol-34:2 | 3-phosphoinositide biosynthesis, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, sphingolipid biosynthesis, linoleate biosynthesis I, cutin biosynthesis, glycerophosphodiester degradation, phosphate acquisition, glutathione redox reactions I |
0.75 | 0.5 | -0.48 | ||
71 | C0085 | Digalactosyldiacylglycerol-36:6 | - | Digalactosyldiacylglycerol-36:6 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.73 | 0.52 | -0.46 | ||
72 | C0083 | Digalactosyldiacylglycerol-36:4 | - | Digalactosyldiacylglycerol-36:4 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.73 | 0.47 | -0.49 | ||
73 | C0084 | Digalactosyldiacylglycerol-36:5 | - | Digalactosyldiacylglycerol-36:5 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.72 | 0.47 | -0.5 | ||
74 | C0206 | Phosphatidylglycerol-34:4 | - | Phosphatidylglycerol-34:4 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
0.66 | 0.33 | -0.33 | ||
75 | C0152 | Monogalactosyldiacylgycerol-34:5 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
0.64 | 0.33 | -0.35 | ||
76 | C0246 | Sulfoquinovosyldiacylglycerol-34:2 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.64 | 0.33 | -0.34 | ||
77 | C0082 | Digalactosyldiacylglycerol-36:3 | - | Digalactosyldiacylglycerol-36:3 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.62 | 0.52 | -0.49 | ||
78 | C0245 | Sulfoquinovosyldiacylglycerol-34:1 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.59 | 0.33 | -0.33 | ||
79 | C0157 | Monogalactosyldiacylgycerol-36:6 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
0.58 | 0.34 | -0.35 | ||
80 | C0205 | Phosphatidylglycerol-34:3 | - | Phosphatidylglycerol-34:3 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
0.57 | 0.32 | -0.3 | ||
81 | C0238 | Sitosterol 3-O-β-D-glucoside | - | 3-O-β-D-Glucosyl-β-sitosterol | sphingolipid biosynthesis | 0.55 | 0.32 | -0.33 | ||
82 | C0250 | Sulfoquinovosyldiacylglycerol-36:5 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.54 | 0.33 | -0.33 | ||
83 | C0156 | Monogalactosyldiacylgycerol-36:5 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
0.53 | 0.34 | -0.34 |