AT5G35420 : -
Query Information
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AGICode AT5G35420
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G35420 transposable element gene 1 0.28 -0.32
2 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.78 0.32 -0.33
3 AT4G35370 Transducin/WD40 repeat-like superfamily protein 0.75 0.33 -0.33
4 AT1G22290 14-3-3 family protein 0.74 0.32 -0.33
5 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 0.73 0.32 -0.32
6 AT1G26300 BSD domain-containing protein -0.73 0.32 -0.31
7 AT2G15750 transposable element gene 0.73 0.3 -0.31
8 AT2G23660 LOB domain-containing protein 10 LOB domain-containing protein 10 0.72 0.32 -0.32
9 AT3G60260 ELMO/CED-12 family protein -0.72 0.32 -0.33
10 AT3G55770 GATA type zinc finger transcription factor family protein WLIM2b -0.72 0.29 -0.31
11 AT2G16210 Transcriptional factor B3 family protein 0.72 0.3 -0.33
12 AT2G45200 golgi snare 12 ATGOS12, golgi snare 12 -0.71 0.3 -0.28
13 AT1G05950 unknown protein; Has 50 Blast hits to 45 proteins in 14
species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.71 0.34 -0.3
14 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.33 -0.31
15 AT5G14470 GHMP kinase family protein -0.7 0.32 -0.3
16 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.69 0.32 -0.3
17 AT4G13420 high affinity K+ transporter 5 ARABIDOPSIS THALIANA HIGH AFFINITY
K+ TRANSPORTER 5, high affinity K+
transporter 5		 0.69 0.29 -0.32
18 AT5G25540 CTC-interacting domain 6 CTC-interacting domain 6 -0.69 0.34 -0.31
19 AT4G15890 binding 0.69 0.3 -0.32
20 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 -0.69 0.35 -0.31
21 AT5G39560 Galactose oxidase/kelch repeat superfamily protein 0.69 0.31 -0.33
22 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 0.69 0.31 -0.31
23 AT1G23610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.69 0.33 -0.32
24 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.69 0.31 -0.31
25 AT5G50820 NAC domain containing protein 97 NAC domain containing protein 97,
NAC domain containing protein 97		 0.69 0.33 -0.3
26 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 0.69 0.31 -0.35
27 AT2G24320 alpha/beta-Hydrolases superfamily protein 0.69 0.3 -0.32
28 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.32 -0.33
29 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.68 0.34 -0.32
30 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.68 0.31 -0.32
31 AT4G39110 Malectin/receptor-like protein kinase family protein 0.68 0.31 -0.31
32 AT4G10550 Subtilase family protein 0.68 0.31 -0.33
33 AT2G07560 H(+)-ATPase 6 H(+)-ATPase 6, H(+)-ATPase 6 -0.68 0.31 -0.3
34 AT4G36370 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.31 -0.28
35 AT4G19470 Leucine-rich repeat (LRR) family protein 0.68 0.29 -0.32
36 AT1G56290 CwfJ-like family protein -0.67 0.32 -0.31
37 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 -0.67 0.33 -0.32
38 AT1G38340 transposable element gene 0.67 0.31 -0.3
39 AT2G07630 transposable element gene 0.67 0.34 -0.31
40 AT1G20480 AMP-dependent synthetase and ligase family protein -0.67 0.32 -0.32
41 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 0.67 0.34 -0.31
42 AT4G08710 transposable element gene -0.67 0.31 -0.3
43 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.67 0.3 -0.32
44 AT2G15270 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1168 (InterPro:IPR009548); Has 1930
Blast hits to 1364 proteins in 219 species: Archae - 0;
Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96;
Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).		 -0.67 0.31 -0.31
45 AT4G11400 ARID/BRIGHT DNA-binding domain;ELM2 domain protein -0.67 0.3 -0.33
46 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.67 0.31 -0.31
47 AT2G20880 Integrase-type DNA-binding superfamily protein AtERF53, ERF domain 53 0.66 0.32 -0.33
48 AT3G07680 emp24/gp25L/p24 family/GOLD family protein -0.66 0.31 -0.31
49 AT3G18120 F-box associated ubiquitination effector family protein 0.66 0.32 -0.33
50 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 0.66 0.31 -0.34
51 AT4G10820 F-box family protein 0.66 0.32 -0.31
52 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 0.66 0.33 -0.31
53 AT4G12530 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.29 -0.32
54 AT5G61650 CYCLIN P4;2 CYCP4, CYCLIN P4;2 -0.65 0.31 -0.3
55 AT3G18450 PLAC8 family protein -0.65 0.31 -0.32
56 AT3G58460 RHOMBOID-like protein 15 RHOMBOID-like protein 15,
RHOMBOID-like protein 15		 -0.64 0.3 -0.31
57 AT3G61170 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.32 -0.34
58 AT5G05850 plant intracellular ras group-related LRR 1 plant intracellular ras
group-related LRR 1		 -0.64 0.33 -0.34
59 AT3G56600 Protein kinase superfamily protein -0.64 0.3 -0.31
60 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.31 -0.34
61 AT2G06120 transposable element gene 0.64 0.31 -0.32
62 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 -0.64 0.31 -0.34
63 AT4G04420 transposable element gene 0.64 0.3 -0.3
64 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.31 -0.31
65 AT4G03690 transposable element gene 0.64 0.31 -0.32
66 AT4G03480 Ankyrin repeat family protein -0.64 0.31 -0.3
67 AT5G34800 transposable element gene 0.64 0.28 -0.32
68 AT2G23940 Protein of unknown function (DUF788) -0.63 0.31 -0.31
69 AT2G14020 transposable element gene 0.63 0.32 -0.31
70 AT2G32360 Ubiquitin-like superfamily protein 0.63 0.34 -0.33
71 AT3G24340 chromatin remodeling 40 chromatin remodeling 40 0.63 0.32 -0.33
72 AT5G14240 Thioredoxin superfamily protein -0.63 0.32 -0.32
73 AT4G17330 G2484-1 protein G2484-1 protein, G2484-1 protein 0.63 0.32 -0.33
74 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 0.63 0.31 -0.33
75 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 0.63 0.3 -0.32
76 AT1G73380 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1308 (InterPro:IPR010733); Has 162
Blast hits to 160 proteins in 67 species: Archae - 0;
Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 -0.63 0.33 -0.31
77 AT4G38340 Plant regulator RWP-RK family protein 0.63 0.31 -0.31
78 AT2G35460 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.63 0.31 -0.29
79 AT2G27375 transposable element gene 0.63 0.28 -0.31
80 AT5G44760 C2 domain-containing protein -0.63 0.33 -0.32
81 AT4G22700 LOB domain-containing protein 32 LOB domain-containing protein 32 0.63 0.31 -0.31
82 AT3G26870 Plant self-incompatibility protein S1 family 0.63 0.33 -0.31
83 AT5G57620 myb domain protein 36 myb domain protein 36, myb domain
protein 36		 -0.63 0.31 -0.32
84 AT1G42420 transposable element gene -0.63 0.33 -0.3
85 AT2G36710 Pectin lyase-like superfamily protein -0.62 0.3 -0.3
86 AT3G54490 RNA polymerase II fifth largest subunit, E RNA polymerase II fifth largest
subunit, E		 0.62 0.32 -0.31
87 AT2G39240 RNA polymerase I specific transcription initiation factor
RRN3 protein		 -0.62 0.33 -0.31
88 AT5G27940 WPP domain protein 3 WPP domain protein 3 0.62 0.31 -0.32
89 AT4G03950 Nucleotide/sugar transporter family protein 0.62 0.32 -0.31
90 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.33 -0.33
91 AT2G10010 transposable element gene 0.62 0.33 -0.32
92 AT2G01710 Chaperone DnaJ-domain superfamily protein -0.62 0.34 -0.32
93 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.62 0.3 -0.32
94 AT2G19560 proteasome family protein AtTHP1, ENHANCED ETHYLENE RESPONSE
5, ectopic expression of seed
storage proteins 1		 -0.62 0.31 -0.32
95 AT1G01310 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.62 0.31 -0.32
96 AT5G52690 Copper transport protein family -0.61 0.31 -0.31
97 AT1G80420 BRCT domain-containing DNA repair protein ATXRCC1 -0.61 0.3 -0.31
98 AT1G48640 Transmembrane amino acid transporter family protein -0.61 0.3 -0.31
99 AT3G54130 Josephin family protein -0.61 0.31 -0.32
100 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 -0.61 0.3 -0.33
101 AT3G17090 Protein phosphatase 2C family protein -0.61 0.31 -0.28
102 AT1G75400 RING/U-box superfamily protein -0.6 0.29 -0.31
103 AT5G46370 Ca2+ activated outward rectifying K+ channel 2 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 2, TANDEM PORE K+
CHANNEL 2, Ca2+ activated outward
rectifying K+ channel 2		 -0.6 0.3 -0.33
104 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B -0.6 0.32 -0.31
105 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.6 0.3 -0.3
106 AT2G34020 Calcium-binding EF-hand family protein -0.6 0.31 -0.3
107 AT3G14950 tetratricopetide-repeat thioredoxin-like 2 tetratricopetide-repeat
thioredoxin-like 2		 -0.6 0.3 -0.33
108 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 -0.59 0.32 -0.31
109 AT5G59300 ubiquitin carrier protein 7 ARABIDOPSIS THALIANA UBIQUITIN
CARRIER PROTEIN 7, ubiquitin
carrier protein 7		 -0.59 0.31 -0.31
110 AT2G21780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39360.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.33 -0.31
111 AT1G33900 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.3
112 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 -0.59 0.3 -0.28
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.71 0.44 -0.46 C0016