AT1G48900 : -
Query Information
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AGICode AT1G48900
Description Signal recognition particle, SRP54 subunit protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G48900 Signal recognition particle, SRP54 subunit protein 1 0.31 -0.29
2 AT3G29360 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 2 0.83 0.3 -0.32
3 AT1G03350 BSD domain-containing protein 0.79 0.33 -0.33
4 AT2G46170 Reticulon family protein 0.79 0.33 -0.31
5 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 0.78 0.32 -0.31
6 AT3G04830 Protein prenylyltransferase superfamily protein 0.77 0.33 -0.33
7 AT1G05270 TraB family protein 0.76 0.31 -0.31
8 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 0.76 0.32 -0.33
9 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.76 0.35 -0.3
10 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 0.76 0.3 -0.31
11 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 0.75 0.31 -0.33
12 AT1G65650 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH2 0.75 0.32 -0.33
13 AT1G75950 S phase kinase-associated protein 1 ARABIDOPSIS SKP1 HOMOLOGUE 1,
ATSKP1, S phase kinase-associated
protein 1, SKP1A, UFO INTERACTING
PROTEIN 1		 0.75 0.31 -0.34
14 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1		 0.75 0.3 -0.31
15 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.74 0.34 -0.33
16 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.74 0.32 -0.31
17 AT3G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.74 0.3 -0.32
18 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein 0.74 0.3 -0.3
19 AT5G57460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to
166 proteins in 41 species: Archae - 0; Bacteria - 0;
Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.73 0.33 -0.31
20 AT5G49945 Protein of unknown function (DUF1682) 0.73 0.33 -0.32
21 AT3G22950 ADP-ribosylation factor C1 ADP-ribosylation factor C1,
ADP-ribosylation factor C1		 0.73 0.3 -0.32
22 AT3G01340 Transducin/WD40 repeat-like superfamily protein 0.73 0.33 -0.32
23 AT1G53500 NAD-dependent epimerase/dehydratase family protein ARABIDOPSIS THALIANA
MUCILAGE-MODIFIED 4, ARABIDOPSIS
THALIANA RHAMNOSE BIOSYNTHESIS 2,
MUCILAGE-MODIFIED 4, RHAMNOSE
BIOSYNTHESIS 2		 0.73 0.32 -0.33
24 AT4G12230 alpha/beta-Hydrolases superfamily protein 0.73 0.32 -0.33
25 AT3G07170 Sterile alpha motif (SAM) domain-containing protein 0.73 0.3 -0.31
26 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.73 0.3 -0.32
27 AT2G36670 Eukaryotic aspartyl protease family protein -0.72 0.29 -0.31
28 AT3G24350 syntaxin of plants 32 ATSYP32, syntaxin of plants 32 0.72 0.32 -0.32
29 AT2G32390 glutamate receptor 3.5 glutamate receptor 3.5, glutamate
receptor 3.5, GLR6		 0.72 0.3 -0.33
30 AT3G11800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.72 0.33 -0.33
31 AT2G25790 Leucine-rich receptor-like protein kinase family protein -0.71 0.31 -0.33
32 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2		 0.71 0.3 -0.3
33 AT2G31360 16:0delta9 desaturase 2 16:0delta9 desaturase 2,
16:0delta9 desaturase 2		 0.71 0.32 -0.33
34 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.71 0.32 -0.32
35 AT5G14790 ARM repeat superfamily protein 0.71 0.31 -0.32
36 AT2G44610 Ras-related small GTP-binding family protein ATRAB6A, ATRABH1B, RAB6, RAB6A 0.71 0.31 -0.3
37 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 0.71 0.34 -0.31
38 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 -0.7 0.3 -0.3
39 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein 0.7 0.32 -0.3
40 AT2G35990 Putative lysine decarboxylase family protein LONELY GUY 2 0.7 0.29 -0.31
41 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.7 0.33 -0.3
42 AT5G54280 myosin 2 myosin 2, ARABIDOPSIS THALIANA
MYOSIN 4, ARABIDOPSIS THALIANA
MYOSIN 1		 -0.69 0.33 -0.31
43 AT2G29700 pleckstrin homologue 1 pleckstrin homologue 1, pleckstrin
homologue 1		 0.69 0.3 -0.31
44 AT2G34585 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 43 Blast hits to 43
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.32 -0.32
45 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 0.69 0.31 -0.3
46 AT5G54970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.31 -0.27
47 AT1G15370 SNARE-like superfamily protein 0.69 0.31 -0.34
48 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 0.69 0.3 -0.32
49 AT5G11010 Pre-mRNA cleavage complex II protein family 0.69 0.3 -0.32
50 AT1G52910 Protein of unknown function (DUF1218) 0.68 0.3 -0.32
51 AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein 0.68 0.32 -0.3
52 AT3G07300 NagB/RpiA/CoA transferase-like superfamily protein 0.68 0.31 -0.3
53 AT2G17980 Sec1/munc18-like (SM) proteins superfamily ATSLY1 0.68 0.31 -0.3
54 AT5G19050 alpha/beta-Hydrolases superfamily protein 0.68 0.32 -0.33
55 AT4G25360 TRICHOME BIREFRINGENCE-LIKE 18 TRICHOME BIREFRINGENCE-LIKE 18 0.68 0.32 -0.32
56 AT3G05280 Integral membrane Yip1 family protein 0.68 0.31 -0.3
57 AT1G71840 transducin family protein / WD-40 repeat family protein 0.67 0.35 -0.3
58 AT1G49560 Homeodomain-like superfamily protein 0.67 0.32 -0.31
59 AT3G62560 Ras-related small GTP-binding family protein 0.67 0.32 -0.31
60 AT5G52050 MATE efflux family protein -0.67 0.31 -0.32
61 AT3G07330 Cellulose-synthase-like C6 ATCSLC06, Cellulose-synthase-like
C6, CELLULOSE-SYNTHASE LIKE C6,
Cellulose-synthase-like C6		 0.67 0.33 -0.32
62 AT5G55300 DNA topoisomerase I alpha MGOUN 1, TOPOISOMERASE 1, DNA
topoisomerase I alpha		 -0.67 0.3 -0.3
63 AT1G07360 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5A 0.67 0.29 -0.33
64 AT4G17640 casein kinase II beta chain 2 casein kinase II beta chain 2 0.67 0.32 -0.32
65 AT2G13150 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.66 0.29 -0.3
66 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 0.66 0.31 -0.31
67 AT2G44490 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 26, PENETRATION 2 0.66 0.32 -0.32
68 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 0.66 0.33 -0.32
69 AT4G15410 serine/threonine protein phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 serine/threonine protein
phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 0.66 0.32 -0.31
70 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.66 0.29 -0.34
71 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 -0.66 0.32 -0.33
72 AT5G49820 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 6 0.66 0.32 -0.32
73 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 -0.65 0.32 -0.32
74 AT4G17430 O-fucosyltransferase family protein 0.65 0.31 -0.31
75 AT1G77610 EamA-like transporter family protein 0.65 0.31 -0.3
76 AT5G62740 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 ATHIR1, AtHIR4,
HYPERSENSITIVE-INDUCED RESPONSE
PROTEIN 1, hypersensitive induced
reaction 4		 0.65 0.31 -0.29
77 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 0.65 0.33 -0.31
78 AT5G19600 sulfate transporter 3;5 sulfate transporter 3;5 -0.65 0.32 -0.33
79 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 -0.64 0.29 -0.33
80 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.32 -0.31
81 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.34 -0.33
82 AT1G34140 poly(A) binding protein 1 poly(A) binding protein 1 -0.63 0.3 -0.31
83 AT1G22860 Vacuolar sorting protein 39 -0.62 0.31 -0.34
84 AT1G37150 holocarboxylase synthetase 2 holocarboxylase synthetase 2 -0.62 0.33 -0.32
85 AT3G57570 ARM repeat superfamily protein -0.62 0.3 -0.32
86 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.62 0.31 -0.34
87 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 -0.61 0.32 -0.31
88 AT1G63560 Receptor-like protein kinase-related family protein -0.61 0.33 -0.32
89 AT3G49830 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.32 -0.33
90 ATMG00400 hypothetical protein ORF157 -0.61 0.33 -0.3
91 AT3G03240 alpha/beta-Hydrolases superfamily protein -0.61 0.33 -0.31
92 AT2G15440 Protein of unknown function (DUF579) -0.61 0.29 -0.32
93 AT5G48170 F-box family protein SLEEPY2, SNEEZY -0.6 0.33 -0.33
94 AT5G60210 ROP interactive partner 5 ROP interactive partner 5 -0.6 0.32 -0.3
95 AT3G27670 ARM repeat superfamily protein RESURRECTION1 -0.59 0.33 -0.31
96 AT2G22530 Alkaline-phosphatase-like family protein -0.59 0.31 -0.31
97 AT5G52390 PAR1 protein -0.59 0.33 -0.31
98 AT5G45200 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.31 -0.31
99 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 -0.58 0.32 -0.32
100 AT2G17845 NAD(P)-binding Rossmann-fold superfamily protein -0.58 0.31 -0.3
101 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 -0.57 0.34 -0.31
102 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
I		 -0.57 0.32 -0.32
103 AT2G42370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58110.2); Has 205 Blast hits
to 191 proteins in 60 species: Archae - 3; Bacteria - 23;
Metazoa - 73; Fungi - 8; Plants - 34; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.57 0.31 -0.33
104 AT5G49290 receptor like protein 56 receptor like protein 56, receptor
like protein 56		 -0.56 0.32 -0.3
105 AT5G59190 subtilase family protein -0.56 0.32 -0.3
106 AT3G60310 unknown protein; Has 22 Blast hits to 18 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.32 -0.3
107 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7		 -0.56 0.33 -0.3