AGICode | AT5G35270 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G35270 | transposable element gene | 1 | 0.33 | -0.31 | |||
2 | AT2G13720 | DNA topoisomerase (ATP-hydrolyzing)s;ATP binding;DNA binding |
0.6 | 0.32 | -0.3 | |||
3 | AT4G03630 | RNI-like superfamily protein | 0.57 | 0.31 | -0.34 | |||
4 | AT1G72110 | O-acyltransferase (WSD1-like) family protein | 0.56 | 0.32 | -0.32 | |||
5 | AT5G38180 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.55 | 0.3 | -0.31 | |||
6 | AT3G12060 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 1 | -0.55 | 0.31 | -0.34 | ||
7 | AT3G60110 | DNA-binding bromodomain-containing protein | 0.53 | 0.32 | -0.31 | |||
8 | AT5G65100 | Ethylene insensitive 3 family protein | -0.52 | 0.31 | -0.32 | |||
9 | AT1G45100 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.52 | 0.31 | -0.3 | |||
10 | AT1G21610 | wound-responsive family protein | 0.52 | 0.33 | -0.32 | |||
11 | AT5G02680 | LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to 252 proteins in 89 species: Archae - 0; Bacteria - 71; Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.52 | 0.3 | -0.32 | |||
12 | AT2G30810 | Gibberellin-regulated family protein | 0.52 | 0.3 | -0.31 | |||
13 | AT4G15030 | CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink). |
0.52 | 0.31 | -0.3 | |||
14 | AT1G32880 | ARM repeat superfamily protein | 0.51 | 0.34 | -0.32 | |||
15 | AT1G62680 | Pentatricopeptide repeat (PPR) superfamily protein | -0.51 | 0.33 | -0.31 | |||
16 | AT5G61460 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ATRAD18, hypersensitive to MMS, irradiation and MMC, STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B |
0.5 | 0.31 | -0.33 | ||
17 | AT3G62080 | SNF7 family protein | 0.5 | 0.32 | -0.31 | |||
18 | AT1G72350 | MADS-box transcription factor family protein | 0.5 | 0.33 | -0.31 | |||
19 | AT1G63950 | Heavy metal transport/detoxification superfamily protein | 0.49 | 0.32 | -0.33 | |||
20 | AT2G41860 | calcium-dependent protein kinase 14 | calcium-dependent protein kinase 14 |
0.49 | 0.32 | -0.33 | ||
21 | AT3G04990 | BEST Arabidopsis thaliana protein match is: Frigida-like protein (TAIR:AT5G27220.1); Has 30900 Blast hits to 17560 proteins in 1427 species: Archae - 757; Bacteria - 4112; Metazoa - 14311; Fungi - 2221; Plants - 1348; Viruses - 71; Other Eukaryotes - 8080 (source: NCBI BLink). |
-0.49 | 0.33 | -0.31 | |||
22 | AT3G07140 | GPI transamidase component Gpi16 subunit family protein | -0.48 | 0.34 | -0.31 | |||
23 | AT3G27120 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.48 | 0.33 | -0.3 | |||
24 | AT3G46520 | actin-12 | actin-12 | 0.47 | 0.34 | -0.32 | ||
25 | AT3G30840 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.46 | 0.32 | -0.33 | |||
26 | AT3G01250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 50 Blast hits to 50 proteins in 23 species: Archae - 0; Bacteria - 28; Metazoa - 15; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.46 | 0.31 | -0.34 | |||
27 | AT1G17540 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
0.46 | 0.31 | -0.31 | |||
28 | AT5G28760 | transposable element gene | -0.46 | 0.32 | -0.29 | |||
29 | AT5G14870 | cyclic nucleotide-gated channel 18 | CYCLIC NUCLEOTIDE-GATED CHANNEL 18, cyclic nucleotide-gated channel 18 |
0.46 | 0.33 | -0.33 | ||
30 | AT3G47140 | F-box associated ubiquitination effector family protein | 0.45 | 0.32 | -0.3 | |||
31 | AT1G47520 | transposable element gene | -0.45 | 0.33 | -0.3 | |||
32 | AT1G19480 | DNA glycosylase superfamily protein | -0.44 | 0.31 | -0.3 | |||
33 | AT4G03830 | Protein of unknown function, DUF601 | -0.44 | 0.31 | -0.31 | |||
34 | AT3G01020 | ISCU-like 2 | ISCU-LIKE 2, ISCU-like 2 | -0.44 | 0.29 | -0.3 | ||
35 | AT4G02195 | syntaxin of plants 42 | ATSYP42, ATTLG2B, syntaxin of plants 42, TLG2B |
0.44 | 0.32 | -0.32 | ||
36 | AT3G27070 | translocase outer membrane 20-1 | translocase outer membrane 20-1 | -0.44 | 0.32 | -0.33 | ||
37 | AT3G51570 | Disease resistance protein (TIR-NBS-LRR class) family | -0.44 | 0.3 | -0.32 | |||
38 | AT3G31460 | transposable element gene | -0.43 | 0.31 | -0.28 | |||
39 | AT3G05820 | invertase H | alkaline/neutral invertase H, Arabidopsis alkaline/neutral invertase H, invertase H |
-0.43 | 0.31 | -0.32 | ||
40 | AT1G59725 | DNAJ heat shock family protein | -0.43 | 0.28 | -0.3 | |||
41 | AT1G29480 | unknown protein; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.43 | 0.33 | -0.34 | |||
42 | AT4G25420 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
AT2301, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA REQUIRING 5 |
-0.43 | 0.31 | -0.33 | ||
43 | AT1G71680 | Transmembrane amino acid transporter family protein | 0.43 | 0.31 | -0.3 | |||
44 | AT2G31035 | BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1B (TAIR:AT2G31030.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.43 | 0.29 | -0.33 | |||
45 | AT4G21630 | Subtilase family protein | -0.42 | 0.31 | -0.31 | |||
46 | AT5G56470 | FAD-dependent oxidoreductase family protein | -0.41 | 0.32 | -0.32 | |||
47 | AT4G22050 | Eukaryotic aspartyl protease family protein | -0.4 | 0.32 | -0.31 | |||
48 | AT2G13900 | Cysteine/Histidine-rich C1 domain family protein | 0.4 | 0.31 | -0.29 | |||
49 | AT1G43730 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
-0.4 | 0.31 | -0.34 | |||
50 | AT3G28190 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.4 | 0.31 | -0.31 | |||
51 | AT4G14080 | O-Glycosyl hydrolases family 17 protein | maternal effect embryo arrest 48 | -0.4 | 0.32 | -0.3 | ||
52 | AT2G37830 | pseudogene, glycine-rich protein | -0.4 | 0.33 | -0.32 |