AGICode | AT5G30470 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G30470 | transposable element gene | 1 | 0.32 | -0.32 | |||
2 | AT3G46860 | Serine protease inhibitor, potato inhibitor I-type family protein |
0.75 | 0.3 | -0.32 | |||
3 | AT3G13170 | Spo11/DNA topoisomerase VI, subunit A protein | ATSPO11-1 | 0.75 | 0.3 | -0.33 | ||
4 | AT5G12450 | FBD-like domain family protein | 0.73 | 0.32 | -0.32 | |||
5 | AT1G59630 | F-box associated ubiquitination effector family protein | -0.73 | 0.33 | -0.31 | |||
6 | AT2G11360 | transposable element gene | 0.72 | 0.3 | -0.3 | |||
7 | AT4G05500 | pseudogene, F-box protein family, AtFBL9/AtFBL23, contains similarity to N7 protein GI:3273101 from (Medicago truncatula); blastp match of 39% identity and 1.6e-34 P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein {Medicago truncatula} |
0.71 | 0.33 | -0.31 | |||
8 | AT1G67710 | response regulator 11 | response regulator 11 | 0.71 | 0.31 | -0.32 | ||
9 | AT4G23930 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.71 | 0.31 | -0.29 | |||
10 | AT4G05060 | PapD-like superfamily protein | -0.71 | 0.32 | -0.33 | |||
11 | AT1G58300 | heme oxygenase 4 | heme oxygenase 4 | 0.7 | 0.31 | -0.33 | ||
12 | AT5G41320 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.7 | 0.32 | -0.32 | |||
13 | AT2G35590 | pseudogene, serpin (serine protease inhibitor), putative, similar to protein zx (Hordeum vulgare subsp. vulgare) GI:19071, serpin (Triticum aestivum) GI:1885346; contains Pfam profile PF00079: Serpin (serine protease inhibitor); this is very likely a pseudogene.; blastp match of 52% identity and 2.2e-73 P-value to GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein {Citrus x paradisi} |
-0.69 | 0.31 | -0.32 | |||
14 | AT3G11240 | arginine-tRNA protein transferase 2 | ATATE2, arginine-tRNA protein transferase 2 |
0.69 | 0.33 | -0.34 | ||
15 | AT3G12840 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.69 | 0.3 | -0.3 | |||
16 | AT5G60280 | Concanavalin A-like lectin protein kinase family protein | 0.69 | 0.34 | -0.32 | |||
17 | AT3G19880 | F-box and associated interaction domains-containing protein | 0.68 | 0.34 | -0.33 | |||
18 | AT1G18280 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.68 | 0.3 | -0.33 | |||
19 | AT1G35380 | transposable element gene | -0.68 | 0.31 | -0.29 | |||
20 | AT1G21340 | Dof-type zinc finger DNA-binding family protein | 0.68 | 0.31 | -0.32 | |||
21 | AT1G51880 | root hair specific 6 | root hair specific 6 | -0.68 | 0.3 | -0.31 | ||
22 | AT2G34230 | Protein with domains of unknown function (DUF627 and DUF629) |
0.67 | 0.33 | -0.3 | |||
23 | AT1G54720 | early-responsive to dehydration protein-related / ERD protein-related |
0.67 | 0.34 | -0.3 | |||
24 | AT2G03260 | EXS (ERD1/XPR1/SYG1) family protein | 0.67 | 0.32 | -0.3 | |||
25 | AT2G26420 | 1-phosphatidylinositol-4-phosphate 5-kinase 3 | 1-phosphatidylinositol-4-phosphate 5-kinase 3 |
-0.67 | 0.32 | -0.32 | ||
26 | AT2G29780 | Galactose oxidase/kelch repeat superfamily protein | 0.67 | 0.32 | -0.32 | |||
27 | AT1G61750 | Receptor-like protein kinase-related family protein | -0.66 | 0.31 | -0.31 | |||
28 | AT4G11590 | F-box associated ubiquitination effector family protein | 0.66 | 0.3 | -0.3 | |||
29 | AT1G28030 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.66 | 0.32 | -0.33 | |||
30 | AT1G64920 | UDP-Glycosyltransferase superfamily protein | 0.66 | 0.29 | -0.35 | |||
31 | AT4G30540 | Class I glutamine amidotransferase-like superfamily protein | -0.66 | 0.3 | -0.34 | |||
32 | AT1G18510 | tetraspanin 16 | tetraspanin 16 | 0.66 | 0.32 | -0.29 | ||
33 | AT1G63190 | Cystatin/monellin superfamily protein | 0.66 | 0.31 | -0.31 | |||
34 | AT3G24650 | AP2/B3-like transcriptional factor family protein | ABA INSENSITIVE 3, ABSCISIC ACID INSENSITIVE 3, SUGAR INSENSITIVE 10 |
0.66 | 0.32 | -0.3 | ||
35 | AT4G02190 | Cysteine/Histidine-rich C1 domain family protein | -0.66 | 0.33 | -0.35 | |||
36 | AT1G02540 | unknown protein; Has 3327 Blast hits to 2216 proteins in 265 species: Archae - 18; Bacteria - 202; Metazoa - 802; Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes - 1751 (source: NCBI BLink). |
0.65 | 0.32 | -0.31 | |||
37 | AT3G49270 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G49300.1); Has 63 Blast hits to 43 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.65 | 0.3 | -0.32 | |||
38 | AT4G38000 | DNA binding with one finger 4.7 | DNA binding with one finger 4.7 | 0.65 | 0.32 | -0.33 | ||
39 | AT5G61210 | soluble N-ethylmaleimide-sensitive factor adaptor protein 33 |
ATSNAP33, ATSNAP33B, soluble N-ethylmaleimide-sensitive factor adaptor protein 33, SNP33 |
-0.65 | 0.31 | -0.31 | ||
40 | AT4G18920 | Protein of unknown function (DUF1264) | -0.65 | 0.31 | -0.32 | |||
41 | AT1G19290 | Pentatricopeptide repeat (PPR) superfamily protein | 0.65 | 0.29 | -0.31 | |||
42 | AT1G45545 | Plant protein of unknown function (DUF827) | 0.65 | 0.33 | -0.32 | |||
43 | AT3G05210 | nucleotide repair protein, putative | ERCC1, UV REPAIR DEFICIENT 7 | 0.64 | 0.29 | -0.3 | ||
44 | AT5G42690 | Protein of unknown function, DUF547 | 0.64 | 0.31 | -0.32 | |||
45 | AT1G32320 | MAP kinase kinase 10 | MAP kinase kinase 10, MAP kinase kinase 10 |
-0.64 | 0.31 | -0.34 | ||
46 | AT2G03320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.3 | -0.31 | |||
47 | AT4G08710 | transposable element gene | -0.64 | 0.32 | -0.33 | |||
48 | AT2G15610 | Protein of unknown function (DUF1685) | 0.64 | 0.31 | -0.33 | |||
49 | AT3G62890 | Pentatricopeptide repeat (PPR) superfamily protein | -0.64 | 0.3 | -0.32 | |||
50 | AT5G45200 | Disease resistance protein (TIR-NBS-LRR class) family | 0.64 | 0.32 | -0.3 | |||
51 | AT1G42460 | transposable element gene | 0.64 | 0.29 | -0.32 | |||
52 | AT4G13020 | Protein kinase superfamily protein | MHK | 0.64 | 0.3 | -0.32 | ||
53 | AT2G34330 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29540.1); Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.33 | -0.33 | |||
54 | AT4G23110 | insulin-like growth factor binding | 0.63 | 0.32 | -0.32 | |||
55 | AT1G02740 | MRG family protein | -0.63 | 0.31 | -0.32 | |||
56 | AT3G28560 | BCS1 AAA-type ATPase | -0.63 | 0.32 | -0.31 | |||
57 | AT5G22960 | alpha/beta-Hydrolases superfamily protein | 0.63 | 0.32 | -0.33 | |||
58 | AT5G28590 | DNA-binding family protein | 0.63 | 0.31 | -0.34 | |||
59 | AT3G58770 | unknown protein; Has 38 Blast hits to 36 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.63 | 0.33 | -0.28 | |||
60 | AT1G59790 | Cullin family protein | 0.63 | 0.32 | -0.3 | |||
61 | AT4G22650 | CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G22640.1); Has 25 Blast hits to 25 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.3 | -0.31 | |||
62 | AT4G37780 | myb domain protein 87 | ATMYB87, myb domain protein 87 | -0.63 | 0.31 | -0.31 | ||
63 | AT1G50090 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
-0.62 | 0.34 | -0.32 | |||
64 | AT4G17760 | damaged DNA binding;exodeoxyribonuclease IIIs | -0.62 | 0.31 | -0.32 | |||
65 | AT2G31780 | RING/U-box superfamily protein | ARIADNE 11, ARABIDOPSIS ARIADNE 11 | 0.62 | 0.32 | -0.32 | ||
66 | AT4G07920 | transposable element gene | -0.62 | 0.33 | -0.33 | |||
67 | AT3G13662 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.62 | 0.31 | -0.31 | |||
68 | AT3G20190 | Leucine-rich repeat protein kinase family protein | -0.62 | 0.31 | -0.34 | |||
69 | AT3G06250 | FAR1-related sequence 7 | FAR1-related sequence 7 | 0.62 | 0.3 | -0.3 | ||
70 | AT1G05070 | Protein of unknown function (DUF1068) | -0.62 | 0.3 | -0.32 | |||
71 | AT3G15890 | Protein kinase superfamily protein | -0.62 | 0.31 | -0.32 | |||
72 | AT5G48270 | Plant protein of unknown function (DUF868) | 0.62 | 0.31 | -0.31 | |||
73 | AT4G04980 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink). |
0.61 | 0.31 | -0.32 | |||
74 | AT1G31260 | zinc transporter 10 precursor | zinc transporter 10 precursor | -0.61 | 0.32 | -0.29 | ||
75 | AT1G72960 | Root hair defective 3 GTP-binding protein (RHD3) | -0.61 | 0.31 | -0.31 | |||
76 | AT1G32000 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38190.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.33 | -0.29 | |||
77 | AT5G28620 | protein kinase C-related | -0.61 | 0.31 | -0.3 | |||
78 | AT1G59600 | ZCW7 | ZCW7 | -0.61 | 0.31 | -0.3 | ||
79 | AT1G43680 | BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding (TAIR:AT5G36228.1); Has 59 Blast hits to 57 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.31 | -0.32 | |||
80 | AT1G14750 | Cyclin family protein | SOLO DANCERS | -0.61 | 0.31 | -0.32 | ||
81 | ATMG00070 | NADH dehydrogenase subunit 9 | NADH dehydrogenase subunit 9 | 0.61 | 0.33 | -0.3 | ||
82 | AT5G14890 | NHL domain-containing protein | -0.61 | 0.3 | -0.32 | |||
83 | AT1G76430 | phosphate transporter 1;9 | phosphate transporter 1;9 | 0.61 | 0.31 | -0.29 | ||
84 | AT5G30420 | pseudogene, hypothetical protein | 0.61 | 0.32 | -0.33 | |||
85 | AT2G30320 | Pseudouridine synthase family protein | -0.61 | 0.29 | -0.33 | |||
86 | AT3G61640 | arabinogalactan protein 20 | arabinogalactan protein 20, Arabinogalactan protein 20 |
-0.6 | 0.3 | -0.31 | ||
87 | AT3G25850 | Cysteine/Histidine-rich C1 domain family protein | -0.6 | 0.34 | -0.34 | |||
88 | AT4G18500 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.3 | -0.33 | |||
89 | AT3G08880 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits to 175 proteins in 60 species: Archae - 4; Bacteria - 33; Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). |
-0.6 | 0.3 | -0.32 | |||
90 | AT1G13540 | Protein of unknown function (DUF1262) | -0.6 | 0.31 | -0.31 | |||
91 | AT5G66640 | DA1-related protein 3 | DA1-related protein 3 | -0.6 | 0.29 | -0.32 | ||
92 | AT2G25070 | Protein phosphatase 2C family protein | -0.59 | 0.33 | -0.29 | |||
93 | AT5G09950 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.59 | 0.3 | -0.33 | |||
94 | AT1G56540 | Disease resistance protein (TIR-NBS-LRR class) family | -0.59 | 0.29 | -0.31 | |||
95 | AT5G62880 | RAC-like 10 | RAC-like 10, ARABIDOPSIS THALIANA RAC-LIKE 10, RHO-RELATED PROTEIN FROM PLANTS 11, RAC-like 10, RHO-related protein from plants 11 |
-0.59 | 0.3 | -0.3 | ||
96 | AT1G63590 | Receptor-like protein kinase-related family protein | -0.59 | 0.31 | -0.32 | |||
97 | AT5G56130 | Transducin/WD40 repeat-like superfamily protein | AtTEX1, TEX1, THO3 | -0.58 | 0.34 | -0.32 | ||
98 | AT4G38670 | Pathogenesis-related thaumatin superfamily protein | -0.58 | 0.33 | -0.32 | |||
99 | AT1G52660 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.58 | 0.29 | -0.32 | |||
100 | AT2G01780 | Curculin-like (mannose-binding) lectin family protein | -0.58 | 0.31 | -0.29 | |||
101 | AT5G47260 | ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases |
-0.58 | 0.34 | -0.33 | |||
102 | AT3G19680 | Protein of unknown function (DUF1005) | -0.58 | 0.31 | -0.31 | |||
103 | AT2G15790 | peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase |
CYCLOPHILIN 40, SQUINT | -0.57 | 0.32 | -0.3 | ||
104 | AT3G56820 | unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
-0.57 | 0.33 | -0.33 | |||
105 | ATMG01410 | open reading frame 204 | open reading frame 204 | -0.57 | 0.32 | -0.33 | ||
106 | AT1G18970 | germin-like protein 4 | germin-like protein 4 | -0.57 | 0.32 | -0.32 | ||
107 | AT3G17620 | F-box and associated interaction domains-containing protein | -0.57 | 0.3 | -0.32 | |||
108 | AT1G11250 | syntaxin of plants 125 | ATSYP125, syntaxin of plants 125 | -0.57 | 0.3 | -0.32 |