AT5G33350 : -
Query Information
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AGICode AT5G33350
Description pseudogene, similar to P0406H10.5, nucleoid DNA-binding protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996; blastp match of 37% identity and 1.5e-57 P-value to GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza sativa (japonica cultivar-group)}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G33350 pseudogene, similar to P0406H10.5, nucleoid DNA-binding
protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996;
blastp match of 37% identity and 1.5e-57 P-value to
GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza
sativa (japonica cultivar-group)}		 1 0.32 -0.31
2 AT3G21380 Mannose-binding lectin superfamily protein -0.71 0.31 -0.31
3 AT3G43750 RING/U-box protein with C6HC-type zinc finger domain -0.69 0.3 -0.29
4 AT5G53280 plastid division1 PLASTID DIVISION1 0.67 0.31 -0.32
5 AT2G06950 transposable element gene -0.67 0.31 -0.32
6 AT5G29070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: zinc ion
binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5
Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.32 -0.31
7 AT2G19390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G29790.1); Has 203 Blast hits
to 188 proteins in 60 species: Archae - 0; Bacteria - 11;
Metazoa - 24; Fungi - 34; Plants - 93; Viruses - 0; Other
Eukaryotes - 41 (source: NCBI BLink).		 -0.66 0.32 -0.33
8 AT3G30843 transposable element gene -0.65 0.32 -0.32
9 AT1G32180 cellulose synthase-like D6 cellulose synthase-like D6,
CELLULOSE SYNTHASE LIKE D6,
cellulose synthase-like D6		 0.65 0.32 -0.31
10 AT5G24710 Transducin/WD40 repeat-like superfamily protein -0.64 0.32 -0.33
11 AT4G39370 ubiquitin-specific protease 27 ubiquitin-specific protease 27 0.64 0.3 -0.32
12 AT5G65230 myb domain protein 53 myb domain protein 53, myb domain
protein 53		 0.64 0.32 -0.31
13 AT1G75490 Integrase-type DNA-binding superfamily protein -0.63 0.33 -0.3
14 AT1G05800 alpha/beta-Hydrolases superfamily protein DONGLE -0.63 0.32 -0.32
15 AT2G14040 transposable element gene 0.63 0.32 -0.3
16 AT2G23230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.63 0.3 -0.31
17 AT4G32220 transposable element gene -0.63 0.32 -0.31
18 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 0.63 0.31 -0.32
19 ATMG00660 hypothetical protein ORF149 -0.63 0.34 -0.34
20 AT5G51480 SKU5 similar 2 SKU5 similar 2 -0.63 0.32 -0.32
21 AT4G28900 transposable element gene 0.63 0.33 -0.32
22 AT1G26710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26720.1); Has 9 Blast hits to
9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.31 -0.31
23 AT1G73440 calmodulin-related 0.62 0.32 -0.31
24 ATMG01200 hypothetical protein ORF294 -0.62 0.3 -0.31
25 ATMG01020 hypothetical protein ORF153B -0.62 0.34 -0.29
26 AT5G66340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.33 -0.31
27 AT1G67770 terminal EAR1-like 2 terminal EAR1-like 2 0.62 0.33 -0.33
28 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.32
29 AT2G11120 transposable element gene 0.61 0.32 -0.31
30 AT1G69860 Major facilitator superfamily protein 0.61 0.33 -0.3
31 AT4G25270 Tetratricopeptide repeat (TPR)-like superfamily protein organelle transcript processing 70 0.61 0.33 -0.31
32 AT3G57850 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: embryo, synergid; EXPRESSED DURING: C
globular stage; BEST Arabidopsis thaliana protein match is:
Plant self-incompatibility protein S1 family
(TAIR:AT3G57840.1); Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.3 -0.31
33 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.6 0.31 -0.3
34 AT2G02640 Cysteine/Histidine-rich C1 domain family protein 0.6 0.3 -0.31
35 AT3G42250 transposable element gene 0.6 0.33 -0.32
36 AT5G56330 alpha carbonic anhydrase 8 alpha carbonic anhydrase 8, A.
THALIANA ALPHA CARBONIC ANHYDRASE
8		 0.6 0.33 -0.33
37 AT4G04000 transposable element gene -0.59 0.28 -0.31
38 AT2G18915 LOV KELCH protein 2 ADAGIO 2, LOV KELCH protein 2 -0.59 0.31 -0.32
39 AT3G59440 Calcium-binding EF-hand family protein -0.59 0.34 -0.31
40 AT5G17470 EF hand calcium-binding protein family -0.59 0.31 -0.31
41 AT1G69190 Dihydropterin pyrophosphokinase / Dihydropteroate synthase 0.59 0.33 -0.33
42 AT2G10380 transposable element gene 0.59 0.34 -0.31
43 AT4G19570 Chaperone DnaJ-domain superfamily protein 0.59 0.32 -0.33
44 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 -0.59 0.32 -0.34
45 AT5G62320 myb domain protein 99 myb domain protein 99, ATMYBCU15,
myb domain protein 99		 -0.58 0.33 -0.32
46 AT1G30515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.34 -0.32
47 AT2G33270 atypical CYS HIS rich thioredoxin 3 atypical CYS HIS rich thioredoxin
3		 -0.58 0.28 -0.32
48 AT4G39756 Galactose oxidase/kelch repeat superfamily protein 0.58 0.3 -0.32
49 AT5G10440 cyclin d4;2 cyclin d4;2 0.58 0.32 -0.32
50 AT1G39750 transposable element gene -0.58 0.3 -0.32
51 AT2G12300 transposable element gene 0.58 0.32 -0.32
52 AT2G21740 Protein of unknown function (DUF1278) -0.58 0.31 -0.3
53 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.29 -0.31
54 AT4G02690 Bax inhibitor-1 family protein -0.58 0.32 -0.31
55 AT5G64160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.58 0.31 -0.3
56 AT5G25860 F-box/RNI-like superfamily protein 0.58 0.31 -0.33
57 AT5G52130 unknown protein; Has 10 Blast hits to 10 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.31 -0.3
58 AT5G61980 ARF-GAP domain 1 ARF-GAP domain 1 -0.57 0.32 -0.28
59 AT5G38160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.57 0.29 -0.31
60 AT4G29090 Ribonuclease H-like superfamily protein -0.57 0.33 -0.32
61 AT4G39320 microtubule-associated protein-related 0.57 0.32 -0.3
62 AT1G13290 C2H2-like zinc finger protein DEFECTIVELY ORGANIZED TRIBUTARIES
5, WIP domain protein 6		 -0.57 0.32 -0.29
63 AT1G43840 transposable element gene -0.57 0.3 -0.3
64 AT1G04090 Plant protein of unknown function (DUF946) 0.57 0.33 -0.34
65 AT1G65180 Cysteine/Histidine-rich C1 domain family protein -0.57 0.32 -0.31
66 AT5G48780 disease resistance protein (TIR-NBS class) -0.57 0.31 -0.33
67 AT2G07280 unknown protein; Has 19 Blast hits to 19 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.33 -0.32
68 AT1G46696 Protein of unknown function, DUF601 -0.57 0.31 -0.31
69 AT1G42365 transposable element gene 0.57 0.3 -0.32
70 AT1G63070 pentatricopeptide (PPR) repeat-containing protein -0.57 0.3 -0.32
71 AT3G57250 Emsy N Terminus (ENT) domain-containing protein -0.57 0.32 -0.31
72 AT2G07320 transposable element gene -0.57 0.31 -0.31
73 AT1G30020 Protein of unknown function, DUF538 -0.57 0.29 -0.3
74 AT5G18990 Pectin lyase-like superfamily protein 0.56 0.31 -0.31
75 AT2G42140 VQ motif-containing protein -0.56 0.31 -0.31
76 AT1G30740 FAD-binding Berberine family protein 0.56 0.31 -0.31
77 AT1G15530 Concanavalin A-like lectin protein kinase family protein 0.56 0.31 -0.32
78 AT1G29220 transcriptional regulator family protein 0.56 0.32 -0.32
79 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.31 -0.32
80 AT5G27160 transposable element gene -0.56 0.31 -0.32
81 AT3G24330 O-Glycosyl hydrolases family 17 protein 0.56 0.33 -0.32
82 AT1G71470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22090.1); Has 11 Blast hits
to 11 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.56 0.32 -0.31
83 AT5G48550 F-box associated ubiquitination effector family protein 0.56 0.34 -0.29
84 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 -0.56 0.34 -0.31
85 AT2G37000 TCP family transcription factor 0.55 0.33 -0.32
86 AT1G74055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 6 growth stages; Has 24 Blast hits to 24 proteins
in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.55 0.31 -0.33
87 AT4G08600 transposable element gene -0.55 0.32 -0.29
88 AT2G31590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G04730.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.55 0.29 -0.32
89 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.55 0.31 -0.31
90 AT2G39705 ROTUNDIFOLIA like 8 DEVIL 11, ROTUNDIFOLIA like 8 -0.55 0.33 -0.34
91 AT1G17390 transposable element gene 0.55 0.31 -0.32
92 AT1G63990 sporulation 11-2 sporulation 11-2 0.55 0.32 -0.3
93 ATMG01000 hypothetical protein ORF114 -0.55 0.31 -0.32
94 AT2G05820 transposable element gene 0.55 0.31 -0.31
95 AT1G73430 sec34-like family protein -0.55 0.3 -0.31