AT5G28940 : -
Query Information
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AGICode AT5G28940
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G28940 transposable element gene 1 0.33 -0.3
2 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.72 0.33 -0.32
3 AT3G42440 transposable element gene 0.71 0.32 -0.32
4 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.68 0.3 -0.3
5 AT1G70080 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.68 0.32 -0.29
6 AT2G32400 glutamate receptor 5 ATGLR3.7, GLUTAMATE RECEPTOR 3.7,
glutamate receptor 5		 0.65 0.33 -0.33
7 AT2G07630 transposable element gene 0.64 0.31 -0.31
8 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.31 -0.3
9 AT5G25890 indole-3-acetic acid inducible 28 indole-3-acetic acid inducible 28,
IAA-ALANINE RESISTANT 2		 -0.64 0.31 -0.31
10 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.62 0.3 -0.32
11 AT5G40030 Protein kinase superfamily protein -0.61 0.3 -0.31
12 AT1G36600 transposable element gene 0.61 0.31 -0.33
13 AT3G42160 Pectin lyase-like superfamily protein 0.61 0.34 -0.31
14 AT2G05170 vacuolar protein sorting 11 vacuolar protein sorting 11,
vacuolar protein sorting 11		 0.6 0.32 -0.3
15 AT1G79700 Integrase-type DNA-binding superfamily protein -0.59 0.31 -0.33
16 AT5G46730 glycine-rich protein -0.59 0.32 -0.33
17 AT3G42820 transposable element gene 0.59 0.33 -0.31
18 AT1G50300 TBP-associated factor 15 TBP-associated factor 15 -0.58 0.34 -0.34
19 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.58 0.32 -0.32
20 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 -0.58 0.34 -0.31
21 AT1G30795 Glycine-rich protein family 0.57 0.32 -0.31
22 AT1G16440 root hair specific 3 root hair specific 3 -0.57 0.31 -0.3
23 AT5G10860 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 3 -0.57 0.32 -0.33
24 AT1G61070 low-molecular-weight cysteine-rich 66 low-molecular-weight cysteine-rich
66, PLANT DEFENSIN 2.4		 -0.57 0.32 -0.32
25 AT1G74310 heat shock protein 101 heat shock protein 101, HOT1, heat
shock protein 101		 0.56 0.33 -0.32
26 AT1G11380 PLAC8 family protein -0.56 0.3 -0.3
27 AT4G17220 microtubule-associated proteins 70-5 microtubule-associated proteins
70-5, microtubule-associated
proteins 70-5		 -0.56 0.31 -0.32
28 AT2G32050 Family of unknown function (DUF572) 0.56 0.29 -0.32
29 AT4G07425 transposable element gene 0.56 0.3 -0.29
30 AT5G07150 Leucine-rich repeat protein kinase family protein 0.55 0.31 -0.31
31 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 0.54 0.33 -0.33
32 AT1G24640 transposable element gene 0.54 0.33 -0.33
33 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 -0.54 0.32 -0.33
34 AT5G35510 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.53 0.31 -0.31
35 AT5G30500 Nucleotide-diphospho-sugar transferases superfamily protein galactinol synthase 10 0.53 0.3 -0.35
36 AT5G35760 Beta-galactosidase related protein -0.52 0.32 -0.3
37 AT3G62680 proline-rich protein 3 ARABIDOPSIS THALIANA PROLINE-RICH
PROTEIN 3, proline-rich protein 3		 -0.52 0.32 -0.31
38 AT4G19650 Mitochondrial transcription termination factor family
protein		 -0.52 0.3 -0.31
39 AT1G42570 pseudogene, similar to P0529E05.9, blastp match of 56%
identity and 1.2e-110 P-value to
GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza
sativa (japonica cultivar-group)}		 0.52 0.33 -0.35
40 AT4G09130 RING/U-box superfamily protein 0.52 0.31 -0.31
41 AT5G36840 transposable element gene 0.51 0.32 -0.33
42 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 -0.51 0.33 -0.29
43 AT3G12850 COP9 signalosome complex-related / CSN complex-related 0.51 0.32 -0.31
44 AT3G42970 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.31 -0.3
45 AT5G28790 transposable element gene 0.51 0.33 -0.3
46 AT2G04680 Cysteine/Histidine-rich C1 domain family protein -0.5 0.3 -0.33
47 AT1G12775 Pentatricopeptide repeat (PPR) superfamily protein 0.5 0.33 -0.31
48 AT3G30350 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 4 -0.5 0.31 -0.33
49 AT2G16840 transposable element gene -0.49 0.31 -0.32
50 AT2G44950 histone mono-ubiquitination 1 histone mono-ubiquitination 1,
REDUCED DORMANCY 4		 -0.49 0.3 -0.3
51 AT5G37030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.49 0.31 -0.31
52 AT4G02250 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.49 0.31 -0.31
53 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 -0.47 0.31 -0.33
54 AT5G18525 protein serine/threonine kinases;protein tyrosine
kinases;ATP binding;protein kinases		 -0.47 0.3 -0.31
55 AT1G52830 indole-3-acetic acid 6 indole-3-acetic acid 6, SHORT
HYPOCOTYL 1		 -0.47 0.33 -0.31
56 AT4G24430 Rhamnogalacturonate lyase family protein -0.46 0.32 -0.33