AT5G27680 : RECQ helicase SIM
Query Information
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AGICode AT5G27680
Description RECQ helicase SIM
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G27680 RECQ helicase SIM RECQ helicase SIM 1 0.32 -0.31
2 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 0.75 0.3 -0.32
3 AT5G19040 isopentenyltransferase 5 Arabidopsis thaliana
ISOPENTENYLTRANSFERASE 5,
isopentenyltransferase 5		 0.75 0.3 -0.3
4 AT1G29020 Calcium-binding EF-hand family protein 0.75 0.34 -0.3
5 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein 0.73 0.31 -0.33
6 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 -0.73 0.29 -0.33
7 AT5G42180 Peroxidase superfamily protein peroxidase 64 0.73 0.3 -0.31
8 AT4G37220 Cold acclimation protein WCOR413 family -0.72 0.32 -0.32
9 AT2G36100 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 1		 0.72 0.33 -0.32
10 AT5G37300 O-acyltransferase (WSD1-like) family protein WSD1 -0.71 0.32 -0.34
11 AT3G29635 HXXXD-type acyl-transferase family protein 0.71 0.31 -0.32
12 AT5G66815 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.71 0.31 -0.31
13 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 0.7 0.31 -0.32
14 AT3G63360 defensin-related 0.7 0.32 -0.31
15 AT1G69800 Cystathionine beta-synthase (CBS) protein -0.7 0.31 -0.28
16 AT2G43480 Peroxidase superfamily protein 0.7 0.34 -0.32
17 AT3G59850 Pectin lyase-like superfamily protein 0.7 0.3 -0.32
18 AT5G14750 myb domain protein 66 myb domain protein 66, myb domain
protein 66, WEREWOLF, WEREWOLF 1		 0.7 0.31 -0.35
19 AT1G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15620.1); Has 154 Blast hits
to 146 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.33 -0.32
20 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.69 0.34 -0.33
21 AT3G28140 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 -0.69 0.32 -0.31
22 AT4G38390 root hair specific 17 root hair specific 17 0.69 0.3 -0.34
23 AT3G49860 ADP-ribosylation factor-like A1B ADP-ribosylation factor-like A1B,
ADP-ribosylation factor-like A1B		 0.69 0.33 -0.32
24 AT4G28650 Leucine-rich repeat transmembrane protein kinase family
protein		 0.69 0.31 -0.32
25 AT2G35770 serine carboxypeptidase-like 28 serine carboxypeptidase-like 28 0.68 0.29 -0.31
26 AT3G29780 ralf-like 27 ralf-like 27 0.68 0.3 -0.32
27 AT2G43050 Plant invertase/pectin methylesterase inhibitor superfamily ATPMEPCRD 0.68 0.28 -0.31
28 AT2G30210 laccase 3 laccase 3 0.68 0.3 -0.3
29 AT5G57450 homolog of X-ray repair cross complementing 3 (XRCC3) ARABIDOPSIS THALIANA HOMOLOG OF
X-RAY REPAIR CROSS COMPLEMENTING 3
(XRCC3), homolog of X-ray repair
cross complementing 3 (XRCC3)		 0.68 0.33 -0.31
30 AT1G74770 zinc ion binding 0.68 0.32 -0.3
31 AT1G02810 Plant invertase/pectin methylesterase inhibitor superfamily 0.68 0.34 -0.34
32 AT3G24210 Ankyrin repeat family protein 0.68 0.3 -0.33
33 AT3G05990 Leucine-rich repeat (LRR) family protein 0.68 0.32 -0.32
34 AT3G19430 late embryogenesis abundant protein-related / LEA
protein-related		 0.68 0.31 -0.31
35 AT1G70580 alanine-2-oxoglutarate aminotransferase 2 alanine-2-oxoglutarate
aminotransferase 2,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 2		 -0.68 0.31 -0.34
36 AT5G54790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.3
37 AT4G32320 ascorbate peroxidase 6 ascorbate peroxidase 6 -0.68 0.32 -0.29
38 AT3G25655 inflorescence deficient in abscission (IDA)-like 1 inflorescence deficient in
abscission (IDA)-like 1		 0.67 0.3 -0.32
39 AT2G37510 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.31 -0.3
40 AT1G71740 unknown protein; Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.32 -0.3
41 AT4G31470 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.67 0.32 -0.32
42 AT3G59940 Galactose oxidase/kelch repeat superfamily protein -0.67 0.31 -0.31
43 AT3G01260 Galactose mutarotase-like superfamily protein 0.67 0.34 -0.32
44 AT1G62280 SLAC1 homologue 1 SLAC1 homologue 1 0.67 0.32 -0.31
45 AT2G39430 Disease resistance-responsive (dirigent-like protein)
family protein		 0.67 0.31 -0.32
46 AT3G49190 O-acyltransferase (WSD1-like) family protein 0.66 0.3 -0.32
47 AT1G51270 structural molecules;transmembrane receptors;structural
molecules		 0.66 0.31 -0.29
48 AT2G28590 Protein kinase superfamily protein 0.66 0.31 -0.3
49 AT3G44950 glycine-rich protein -0.66 0.32 -0.31
50 AT2G04500 Cysteine/Histidine-rich C1 domain family protein 0.66 0.32 -0.31
51 AT1G72760 Protein kinase superfamily protein -0.66 0.33 -0.3
52 AT3G06040 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.66 0.32 -0.29
53 AT4G15390 HXXXD-type acyl-transferase family protein 0.66 0.34 -0.3
54 AT1G65090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits
to 1033 proteins in 192 species: Archae - 0; Bacteria - 61;
Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42;
Other Eukaryotes - 598 (source: NCBI BLink).		 -0.66 0.32 -0.31
55 AT1G23210 glycosyl hydrolase 9B6 glycosyl hydrolase 9B6, glycosyl
hydrolase 9B6		 0.66 0.33 -0.31
56 AT4G10250 HSP20-like chaperones superfamily protein ATHSP22.0 -0.65 0.32 -0.31
57 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.65 0.32 -0.32
58 AT1G73390 Endosomal targeting BRO1-like domain-containing protein -0.65 0.34 -0.31
59 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 0.65 0.32 -0.31
60 AT1G13420 sulfotransferase 4B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 4B,
sulfotransferase 4B		 0.65 0.3 -0.29
61 AT1G28140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2301, transmembrane
(InterPro:IPR019275); Has 140 Blast hits to 140 proteins in
72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3
(source: NCBI BLink).		 -0.65 0.34 -0.33
62 AT1G05570 callose synthase 1 ATGSL06, ATGSL6, callose synthase
1, GSL06, GLUCAN SYNTHASE-LIKE 6		 0.65 0.32 -0.34
63 AT3G50980 dehydrin xero 1 dehydrin xero 1 -0.65 0.33 -0.31
64 AT3G06460 GNS1/SUR4 membrane protein family 0.65 0.3 -0.31
65 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.32 -0.3
66 AT1G01550 Protein of unknown function (DUF793) BYPASS 1 -0.65 0.31 -0.34
67 AT5G26960 Galactose oxidase/kelch repeat superfamily protein -0.65 0.32 -0.34
68 AT1G59940 response regulator 3 response regulator 3 0.64 0.31 -0.31
69 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.32 -0.31
70 AT5G17960 Cysteine/Histidine-rich C1 domain family protein 0.64 0.31 -0.31
71 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 -0.64 0.32 -0.33
72 AT5G60520 Late embryogenesis abundant (LEA) protein-related 0.64 0.3 -0.31
73 AT5G34460 transposable element gene -0.63 0.31 -0.3
74 AT3G48960 Ribosomal protein L13e family protein 0.63 0.33 -0.31
75 AT1G51830 Leucine-rich repeat protein kinase family protein 0.63 0.3 -0.31
76 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 -0.63 0.3 -0.31
77 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.31 -0.31
78 AT3G51770 tetratricopeptide repeat (TPR)-containing protein ARABIDOPSIS ETHYLENE OVERPRODUCER
1, ETHYLENE OVERPRODUCER 1		 -0.63 0.31 -0.3
79 AT4G03153 Kinase interacting (KIP1-like) family protein -0.63 0.31 -0.3
80 AT5G64110 Peroxidase superfamily protein -0.63 0.31 -0.33
81 AT1G54330 NAC domain containing protein 20 NAC domain containing protein 20,
NAC domain containing protein 20		 0.62 0.32 -0.32
82 AT1G57560 myb domain protein 50 myb domain protein 50, myb domain
protein 50		 0.62 0.32 -0.31
83 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 -0.62 0.34 -0.29
84 AT5G48930 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl
transferase		 hydroxycinnamoyl-CoA
shikimate/quinate hydroxycinnamoyl
transferase		 -0.62 0.35 -0.32
85 AT3G52880 monodehydroascorbate reductase 1 monodehydroascorbate reductase 1,
monodehydroascorbate reductase 1		 -0.62 0.34 -0.32
86 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.61 0.3 -0.31
87 AT3G30370 CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant
(InterPro:IPR004332); BEST Arabidopsis thaliana protein
match is: SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein (TAIR:AT1G18050.1);
Has 35 Blast hits to 35 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.31 -0.32
88 AT3G17180 serine carboxypeptidase-like 33 serine carboxypeptidase-like 33 -0.61 0.31 -0.33
89 AT1G22890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.33 -0.31
90 AT1G17230 Leucine-rich receptor-like protein kinase family protein -0.6 0.3 -0.33
91 AT3G48070 RING/U-box superfamily protein -0.6 0.3 -0.33
92 AT3G24260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting
(InterPro:IPR013194); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast
hits to 218 proteins in 65 species: Archae - 7; Bacteria -
6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0;
Other Eukaryotes - 47 (source: NCBI BLink).		 -0.6 0.32 -0.32
93 AT4G25140 oleosin 1 OLEOSIN 1, oleosin 1 -0.6 0.32 -0.3
94 AT2G24530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.32 -0.33
95 AT1G77340 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.31 -0.32
96 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 -0.59 0.33 -0.31
97 AT5G09640 serine carboxypeptidase-like 19 serine carboxypeptidase-like 19,
SINAPOYLGLUCOSE ACCUMULATOR 2		 -0.59 0.33 -0.32
98 AT3G01570 Oleosin family protein -0.59 0.3 -0.32
99 AT1G02550 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.58 0.3 -0.29
100 AT3G56350 Iron/manganese superoxide dismutase family protein -0.58 0.32 -0.31
101 AT1G04000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits
to 62 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.31
102 AT5G05870 UDP-glucosyl transferase 76C1 UDP-glucosyl transferase 76C1 -0.58 0.33 -0.3
103 AT1G42960 expressed protein localized to the inner membrane of the
chloroplast.		 -0.58 0.32 -0.3
104 AT4G38670 Pathogenesis-related thaumatin superfamily protein -0.58 0.33 -0.31
105 AT4G07740 Protein of unknown function (DUF3287) -0.58 0.29 -0.3
106 AT4G11640 serine racemase serine racemase, serine racemase -0.58 0.31 -0.3
107 AT5G47390 myb-like transcription factor family protein -0.58 0.29 -0.32
108 AT5G28780 PIF1 helicase -0.58 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
109 C0188 Nicotine (-)-Nicotine Nicotine - 0.75 0.46 -0.45 C0188