AT5G27720 : embryo defective 1644
Query Information
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AGICode AT5G27720
Description Small nuclear ribonucleoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G27720 Small nuclear ribonucleoprotein family protein embryo defective 1644, SM-like
protein 4		 1 0.31 -0.34
2 AT3G54560 histone H2A 11 histone H2A 11 0.84 0.3 -0.33
3 AT3G19650 cyclin-related 0.83 0.31 -0.31
4 AT5G22880 histone B2 HISTONE H2B, histone B2 0.82 0.34 -0.3
5 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B 0.82 0.32 -0.31
6 AT3G60830 actin-related protein 7 ARP7, actin-related protein 7,
actin-related protein 7		 0.81 0.32 -0.29
7 AT2G45820 Remorin family protein 0.8 0.3 -0.31
8 AT4G15930 Dynein light chain type 1 family protein 0.8 0.32 -0.33
9 AT5G45700 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.8 0.32 -0.31
10 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 0.8 0.33 -0.34
11 AT5G15050 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.79 0.31 -0.31
12 AT2G03780 Translin family protein 0.79 0.33 -0.3
13 AT1G04550 AUX/IAA transcriptional regulator family protein BODENLOS, indole-3-acetic acid
inducible 12		 0.79 0.32 -0.3
14 AT5G65750 2-oxoglutarate dehydrogenase, E1 component -0.79 0.32 -0.31
15 AT5G08020 RPA70-kDa subunit B ARABIDOPSIS THALIANA RPA70-KDA
SUBUNIT B, RPA70-kDa subunit B		 0.78 0.33 -0.3
16 AT4G25680 PPPDE putative thiol peptidase family protein 0.77 0.32 -0.34
17 AT1G08470 strictosidine synthase-like 3 strictosidine synthase-like 3 0.77 0.31 -0.31
18 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 -0.77 0.29 -0.31
19 AT4G24520 P450 reductase 1 ARABIDOPSIS CYTOCHROME REDUCTASE,
P450 reductase 1		 -0.77 0.34 -0.32
20 AT2G07690 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 5 0.76 0.35 -0.34
21 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ATBSMT1, BSMT1 -0.76 0.33 -0.3
22 AT4G08500 MAPK/ERK kinase kinase 1 ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK
kinase kinase 1		 -0.76 0.34 -0.32
23 AT5G46280 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 3 0.76 0.33 -0.32
24 AT3G44380 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.76 0.32 -0.34
25 AT1G16520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast
hits to 234 proteins in 69 species: Archae - 2; Bacteria -
2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0;
Other Eukaryotes - 44 (source: NCBI BLink).		 0.76 0.3 -0.31
26 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A		 0.76 0.33 -0.32
27 AT5G10400 Histone superfamily protein 0.76 0.32 -0.33
28 AT3G27360 Histone superfamily protein 0.75 0.31 -0.33
29 AT5G15730 Protein kinase superfamily protein AtCRLK2,
calcium/calmodulin-regulated
receptor-like kinase 2		 -0.75 0.32 -0.31
30 AT3G27400 Pectin lyase-like superfamily protein 0.75 0.32 -0.33
31 AT5G47050 SBP (S-ribonuclease binding protein) family protein -0.74 0.29 -0.31
32 AT5G43190 Galactose oxidase/kelch repeat superfamily protein -0.74 0.31 -0.35
33 AT1G78650 DNA-directed DNA polymerases POLD3 0.73 0.28 -0.34
34 AT2G42120 DNA polymerase delta small subunit DNA polymerase delta small subunit 0.73 0.32 -0.32
35 AT1G80760 NOD26-like intrinsic protein 6;1 NIP6, NOD26-like intrinsic protein
6;1, NLM7		 0.73 0.32 -0.35
36 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 -0.73 0.32 -0.29
37 AT5G40210 nodulin MtN21 /EamA-like transporter family protein -0.73 0.32 -0.3
38 AT2G37470 Histone superfamily protein 0.73 0.31 -0.34
39 AT2G46570 laccase 6 laccase 6 0.73 0.3 -0.31
40 AT1G26390 FAD-binding Berberine family protein -0.72 0.3 -0.31
41 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.72 0.31 -0.33
42 AT1G69450 Early-responsive to dehydration stress protein (ERD4) -0.72 0.32 -0.31
43 AT4G34310 alpha/beta-Hydrolases superfamily protein -0.71 0.32 -0.31
44 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 -0.71 0.3 -0.33
45 AT3G14270 phosphatidylinositol-4-phosphate 5-kinase family protein FORMS APLOID AND BINUCLEATE CELLS
1B		 -0.71 0.31 -0.31
46 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 -0.7 0.33 -0.32
47 AT2G35980 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 ARABIDOPSIS NDR1/HIN1-LIKE 10,
NDR1/HIN1-LIKE,
YELLOW-LEAF-SPECIFIC GENE 9		 -0.7 0.34 -0.3
48 AT1G08620 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 PKDM7D -0.7 0.31 -0.33
49 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.7 0.31 -0.31
50 AT1G17830 Protein of unknown function (DUF789) -0.7 0.29 -0.3
51 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 -0.69 0.31 -0.3
52 AT1G70720 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.69 0.33 -0.32
53 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 -0.68 0.31 -0.33
54 AT3G63150 MIRO-related GTP-ase 2 CALCIUM BINDING GTP-ASE,
MIRO-related GTP-ase 2		 -0.68 0.32 -0.32
55 AT3G22550 Protein of unknown function (DUF581) -0.67 0.31 -0.3
56 AT1G50030 target of rapamycin target of rapamycin -0.67 0.29 -0.31
57 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 -0.67 0.35 -0.31
58 AT1G10540 nucleobase-ascorbate transporter 8 ATNAT8, nucleobase-ascorbate
transporter 8		 -0.66 0.33 -0.31
59 AT3G49350 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.66 0.33 -0.31
60 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 -0.66 0.31 -0.3
61 AT5G58790 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.66 0.31 -0.28