AT5G27920 : -
Query Information
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AGICode AT5G27920
Description F-box family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G27920 F-box family protein 1 0.3 -0.29
2 AT5G54040 Cysteine/Histidine-rich C1 domain family protein 0.74 0.34 -0.31
3 AT5G13880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G47920.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.73 0.32 -0.31
4 AT5G52170 homeodomain GLABROUS 7 homeodomain GLABROUS 7 0.71 0.32 -0.3
5 AT4G37000 accelerated cell death 2 (ACD2) ACCELERATED CELL DEATH 2,
ARABIDOPSIS THALIANA RED
CHLOROPHYLL CATABOLITE REDUCTASE		 -0.71 0.3 -0.31
6 AT5G54370 Late embryogenesis abundant (LEA) protein-related 0.7 0.31 -0.3
7 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.7 0.31 -0.3
8 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE		 -0.7 0.32 -0.3
9 AT1G16510 SAUR-like auxin-responsive protein family 0.7 0.3 -0.32
10 AT2G19780 Leucine-rich repeat (LRR) family protein -0.7 0.3 -0.33
11 AT1G79470 Aldolase-type TIM barrel family protein 0.7 0.31 -0.33
12 AT3G13590 Cysteine/Histidine-rich C1 domain family protein -0.7 0.32 -0.32
13 AT4G39190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits
to 3562 proteins in 401 species: Archae - 12; Bacteria -
497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses -
22; Other Eukaryotes - 3119 (source: NCBI BLink).		 -0.7 0.3 -0.31
14 AT1G70210 CYCLIN D1;1 ATCYCD1;1, CYCLIN D1;1 -0.7 0.32 -0.31
15 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.69 0.3 -0.32
16 AT4G29670 atypical CYS HIS rich thioredoxin 2 atypical CYS HIS rich thioredoxin
2		 -0.69 0.34 -0.31
17 AT2G21340 MATE efflux family protein -0.69 0.32 -0.31
18 AT2G01900 DNAse I-like superfamily protein 0.69 0.31 -0.33
19 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 -0.69 0.32 -0.33
20 AT1G24530 Transducin/WD40 repeat-like superfamily protein 0.69 0.33 -0.32
21 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.69 0.29 -0.3
22 AT2G40435 BEST Arabidopsis thaliana protein match is: transcription
regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.69 0.33 -0.34
23 AT5G62130 Per1-like family protein -0.68 0.31 -0.31
24 AT1G36060 Integrase-type DNA-binding superfamily protein 0.68 0.31 -0.31
25 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 -0.68 0.3 -0.33
26 AT4G11980 nudix hydrolase homolog 14 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 14, nudix
hydrolase homolog 14, nudix
hydrolase homolog 14		 -0.67 0.33 -0.33
27 AT2G24420 DNA repair ATPase-related -0.67 0.34 -0.3
28 AT3G15590 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.31 -0.3
29 AT2G15530 RING/U-box superfamily protein -0.67 0.3 -0.32
30 AT2G28190 copper/zinc superoxide dismutase 2 copper/zinc superoxide dismutase
2, COPPER/ZINC SUPEROXIDE
DISMUTASE 2		 0.67 0.32 -0.3
31 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.67 0.32 -0.3
32 AT3G59220 pirin ATPIRIN1, pirin, PRN1 0.67 0.3 -0.32
33 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.67 0.32 -0.28
34 AT1G62770 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.67 0.3 -0.31
35 AT2G37130 Peroxidase superfamily protein 0.66 0.3 -0.33
36 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 -0.66 0.31 -0.33
37 AT2G05590 TLD-domain containing nucleolar protein -0.66 0.32 -0.31
38 AT4G24270 EMBRYO DEFECTIVE 140 EMBRYO DEFECTIVE 140 0.66 0.32 -0.31
39 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.66 0.32 -0.32
40 AT2G27290 Protein of unknown function (DUF1279) -0.66 0.31 -0.31
41 AT5G67180 target of early activation tagged (EAT) 3 target of early activation tagged
(EAT) 3		 -0.66 0.33 -0.3
42 AT1G04610 YUCCA 3 YUCCA 3 0.66 0.29 -0.31
43 AT3G21510 histidine-containing phosphotransmitter 1 histidine-containing
phosphotransmitter 1		 0.66 0.3 -0.3
44 AT1G49970 CLP protease proteolytic subunit 1 CLP protease proteolytic subunit
1, NUCLEAR CLPP 5, SUPPRESSOR OF
VARIEGATION 2		 -0.66 0.34 -0.32
45 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.65 0.33 -0.33
46 AT5G49840 ATP-dependent Clp protease -0.65 0.3 -0.33
47 AT1G59940 response regulator 3 response regulator 3 0.65 0.33 -0.32
48 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.65 0.3 -0.3
49 AT4G13260 Flavin-binding monooxygenase family protein YUCCA2 -0.65 0.32 -0.31
50 AT3G61970 AP2/B3-like transcriptional factor family protein NGATHA2 -0.65 0.31 -0.33
51 AT3G04870 zeta-carotene desaturase PIGMENT DEFECTIVE EMBRYO 181,
SPONTANEOUS CELL DEATH 1,
zeta-carotene desaturase		 -0.65 0.3 -0.31
52 AT5G01200 Duplicated homeodomain-like superfamily protein -0.64 0.32 -0.32
53 AT4G27590 Heavy metal transport/detoxification superfamily protein 0.64 0.3 -0.3
54 AT5G65670 indole-3-acetic acid inducible 9 indole-3-acetic acid inducible 9 0.64 0.34 -0.3
55 AT3G22750 Protein kinase superfamily protein 0.64 0.31 -0.32
56 AT5G49870 Mannose-binding lectin superfamily protein 0.64 0.34 -0.31
57 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase		 -0.64 0.31 -0.3
58 AT4G27435 Protein of unknown function (DUF1218) -0.63 0.32 -0.31
59 AT2G17300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast
hits to 42 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.3 -0.3
60 AT2G44930 Plant protein of unknown function (DUF247) -0.63 0.32 -0.3
61 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 -0.63 0.32 -0.31
62 AT3G57070 Glutaredoxin family protein -0.62 0.32 -0.33
63 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.62 0.33 -0.31
64 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases -0.62 0.32 -0.31
65 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 -0.62 0.3 -0.3
66 AT3G23400 Plastid-lipid associated protein PAP / fibrillin family
protein		 fibrillin 4 -0.62 0.32 -0.33
67 AT5G65890 ACT domain repeat 1 ACT domain repeat 1 -0.62 0.31 -0.34
68 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 -0.61 0.3 -0.33
69 AT2G17350 unknown protein; Has 119 Blast hits to 93 proteins in 40
species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi -
12; Plants - 44; Viruses - 0; Other Eukaryotes - 42
(source: NCBI BLink).		 -0.61 0.31 -0.31
70 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.61 0.33 -0.34
71 AT5G19580 glyoxal oxidase-related protein -0.61 0.33 -0.31
72 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.27 -0.33
73 AT3G01670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits
to 111 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 sieve element occlusion a -0.61 0.31 -0.34
74 AT4G27840 SNARE-like superfamily protein -0.61 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0071 Cyanidin 3-O-[2''-O-(6'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-(6''''-O-malonyl) glucoside - - - -0.77 0.45 -0.48
76 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - -0.7 0.43 -0.46
77 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.63 0.33 -0.3 C0092
78 C0009 myo-Inositol - myo-Inositol stachyose biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
D-myo-inositol (1,4,5)-trisphosphate degradation,
galactosylcyclitol biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
phytate degradation I,
myo-inositol biosynthesis,
ajugose biosynthesis I (galactinol-dependent),
phospholipid biosynthesis II 		-0.63 0.44 -0.43 C0009