AT5G27430 : -

Cytoscape Web will replace the contents of this div with your graph.

Change layout

ForceDirected
Circle
Radial
Tree
Reset

Change color

Background(random)
Nodes(random)
Nodes2(random)

AGICode	AT5G27430
Description	Signal peptidase subunit

Gene information

Help

	Gene Code	Description / Information	Gene name	Correlation				link
	Gene Code	Description / Information	Gene name	pcc	2.5%	97.5%	PPI	link
1	AT5G27430	Signal peptidase subunit		1	0.33	-0.31
2	AT5G18110	novel cap-binding protein	novel cap-binding protein	0.71	0.3	-0.29
3	AT5G27940	WPP domain protein 3	WPP domain protein 3	-0.68	0.3	-0.31
4	AT3G13845	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.68	0.31	-0.33
5	AT5G51510	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1352 (InterPro:IPR009787); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).		0.68	0.29	-0.32
6	AT5G02740	Ribosomal protein S24e family protein		0.67	0.3	-0.33
7	AT2G33610	switch subunit 3	switch subunit 3, CHROMATIN REMODELING COMPLEX SUBUNIT B, switch subunit 3	0.66	0.32	-0.33
8	AT1G19580	gamma carbonic anhydrase 1	gamma carbonic anhydrase 1	0.66	0.32	-0.33
9	AT5G36290	Uncharacterized protein family (UPF0016)		0.66	0.28	-0.33
10	AT3G25560	NSP-interacting kinase 2	NSP-interacting kinase 2	-0.65	0.3	-0.31
11	AT3G09900	RAB GTPase homolog E1E	ATRAB8E, RAB GTPase homolog E1E, RAB GTPase homolog E1E	0.64	0.31	-0.32
12	AT5G14650	Pectin lyase-like superfamily protein		0.64	0.31	-0.32
13	AT3G57780	BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast hits to 2460 proteins in 357 species: Archae - 16; Bacteria - 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses - 72; Other Eukaryotes - 1360 (source: NCBI BLink).		-0.63	0.31	-0.31
14	AT5G19700	MATE efflux family protein		-0.63	0.34	-0.3
15	AT1G32030	Domain of unknown function (DUF313)		-0.62	0.33	-0.31
16	AT1G32020	F-box family protein		0.62	0.35	-0.32
17	AT5G10980	Histone superfamily protein		0.61	0.33	-0.3
18	AT1G63700	Protein kinase superfamily protein	EMBRYO DEFECTIVE 71, MAP KINASE KINASE KINASE 4, YODA	-0.61	0.3	-0.32
19	AT5G45570	Ulp1 protease family protein		-0.61	0.31	-0.31
20	AT3G11730	Ras-related small GTP-binding family protein	ATFP8, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG D1, RAB GTPASE HOMOLOG D1	0.61	0.32	-0.31
21	AT5G20690	Leucine-rich repeat protein kinase family protein		-0.61	0.31	-0.29
22	AT1G44414	unknown protein; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.61	0.32	-0.3
23	AT5G09770	Ribosomal protein L17 family protein		0.61	0.33	-0.32
24	ATMG00630	hypothetical protein	ORF110B	-0.6	0.31	-0.32
25	AT2G05810	ARM repeat superfamily protein		-0.6	0.31	-0.31
26	ATCG00040	maturase K	maturase K	-0.6	0.35	-0.31
27	AT3G61170	Tetratricopeptide repeat (TPR)-like superfamily protein		-0.59	0.29	-0.29
28	ATCG00070	photosystem II reaction center protein K precursor	photosystem II reaction center protein K precursor	-0.59	0.32	-0.29
29	AT4G36780	BES1/BZR1 homolog 2	BES1/BZR1 homolog 2	0.59	0.31	-0.32
30	AT4G09460	myb domain protein 6	myb domain protein 6, myb domain protein 6	0.59	0.32	-0.34
31	AT1G35330	RING/U-box superfamily protein		0.59	0.31	-0.31
32	AT2G25230	myb domain protein 100	myb domain protein 100, myb domain protein 100	0.58	0.3	-0.31
33	AT1G79180	myb domain protein 63	MYB DOMAIN PROTEIN 63, myb domain protein 63	0.58	0.32	-0.31
34	AT2G15780	Cupredoxin superfamily protein		0.58	0.31	-0.31
35	AT5G45800	Leucine-rich repeat protein kinase family protein	maternal effect embryo arrest 62	-0.58	0.31	-0.31
36	AT2G13510	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G13500.1); Has 136 Blast hits to 116 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.58	0.32	-0.32
37	AT3G50210	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein		0.58	0.32	-0.32
38	AT2G46060	transmembrane protein-related		-0.58	0.3	-0.31
39	AT1G61930	Protein of unknown function, DUF584		-0.57	0.32	-0.32
40	AT1G53090	SPA1-related 4	SPA1-related 4	-0.57	0.32	-0.31
41	AT5G50340	ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases		-0.57	0.33	-0.33
42	AT1G51160	SNARE-like superfamily protein		0.56	0.3	-0.32
43	AT5G47460	Pentatricopeptide repeat (PPR) superfamily protein		-0.56	0.34	-0.29
44	AT4G17330	G2484-1 protein	G2484-1 protein, G2484-1 protein	-0.56	0.33	-0.32
45	AT5G07560	glycine-rich protein 20	ATGRP20, glycine-rich protein 20	0.56	0.31	-0.33
46	AT1G63430	Leucine-rich repeat protein kinase family protein		-0.56	0.27	-0.31
47	AT4G18080	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1184) (TAIR:AT3G27900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		-0.56	0.32	-0.3
48	AT5G60770	nitrate transporter 2.4	ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.4, nitrate transporter 2.4	0.56	0.31	-0.3
49	AT4G09690	Cysteine/Histidine-rich C1 domain family protein		-0.56	0.3	-0.31
50	AT1G55520	TATA binding protein 2	A. THALIANA TATA BINDING PROTEIN 2, TATA binding protein 2	0.55	0.29	-0.32
51	AT2G27410	Domain of unknown function (DUF313)		0.55	0.31	-0.31
52	AT2G19180	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.55	0.32	-0.33
53	AT5G05980	DHFS-FPGS homolog B	DHFS-FPGS homolog B, DHFS-FPGS homolog B, folylpolyglutamate synthetase 1	0.55	0.31	-0.31
54	AT3G28540	P-loop containing nucleoside triphosphate hydrolases superfamily protein		-0.55	0.31	-0.31
55	AT3G14950	tetratricopetide-repeat thioredoxin-like 2	tetratricopetide-repeat thioredoxin-like 2	0.55	0.31	-0.32
56	AT3G60240	eukaryotic translation initiation factor 4G	CUCUMOVIRUS MULTIPLICATION 2, eukaryotic translation initiation factor 4G	-0.54	0.32	-0.31
57	AT1G03960	Calcium-binding EF hand family protein		-0.54	0.33	-0.31
58	AT2G32290	beta-amylase 6	beta-amylase 6, BETA-AMYLASE 5	-0.53	0.33	-0.32
59	AT4G08190	P-loop containing nucleoside triphosphate hydrolases superfamily protein		-0.53	0.32	-0.32
60	AT5G39785	Protein of unknown function (DUF1666)		-0.53	0.31	-0.3
61	AT1G33390	RNA helicase family protein	FASCIATED STEM 4, FASCIATED STEM 4	-0.53	0.32	-0.3
62	AT1G67450	F-box and associated interaction domains-containing protein		-0.53	0.31	-0.31
63	AT5G46100	Pentatricopeptide repeat (PPR) superfamily protein		-0.52	0.29	-0.33
64	AT4G25200	mitochondrion-localized small heat shock protein 23.6	mitochondrion-localized small heat shock protein 23.6, mitochondrion-localized small heat shock protein 23.6	-0.52	0.32	-0.33
65	AT4G03690	transposable element gene		-0.52	0.33	-0.31
66	AT5G25120	ytochrome p450, family 71, subfamily B, polypeptide 11	ytochrome p450, family 71, subfamily B, polypeptide 11	-0.51	0.32	-0.32
67	AT3G21210	zinc ion binding		-0.51	0.31	-0.31
68	AT5G39500	GNOM-like 1	ENDOPLASMIC RETICULUM MORPHOLOGY 1, GNOM-like 1	-0.51	0.3	-0.33
69	AT5G51090	unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.51	0.3	-0.29

Metabolite information

Help

	CID	Metabolite name			Pathway Information	Correlation				link
	CID	Compound name	Stereochemistry	Aracyc name	Pathway Information	pcc	2.5%	97.5%	PPI	link
70	C0228	Ribose-5-phosphate	D-Ribose-5-phosphate	D-Ribose-5-phosphate	PRPP biosynthesis I, Calvin-Benson-Bassham cycle, trans-zeatin biosynthesis, pentose phosphate pathway (non-oxidative branch), pyridine nucleotide cycling (plants), Rubisco shunt, ribose degradation, pyridoxal 5'-phosphate biosynthesis II	0.75	0.47	-0.43
71	C0096	Gluconic acid	-	D-Gluconate	-	-0.58	0.45	-0.46

Top