AT5G27270 : EMBRYO DEFECTIVE 976
Query Information
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AGICode AT5G27270
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G27270 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 976 1 0.29 -0.3
2 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.84 0.31 -0.32
3 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.81 0.29 -0.32
4 AT5G37290 ARM repeat superfamily protein 0.8 0.32 -0.32
5 AT1G49630 presequence protease 2 presequence protease 2,
presequence protease 2		 0.8 0.31 -0.3
6 AT4G13050 Acyl-ACP thioesterase 0.77 0.32 -0.33
7 AT1G64270 transposable element gene 0.76 0.31 -0.33
8 AT1G64300 Protein kinase family protein 0.76 0.31 -0.33
9 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 0.75 0.31 -0.31
10 AT1G57770 FAD/NAD(P)-binding oxidoreductase family protein 0.74 0.3 -0.33
11 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.73 0.32 -0.33
12 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 0.73 0.32 -0.29
13 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 0.73 0.3 -0.31
14 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.29 -0.31
15 AT1G65370 TRAF-like family protein 0.72 0.33 -0.3
16 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 0.71 0.32 -0.33
17 AT5G35840 phytochrome C phytochrome C 0.71 0.33 -0.3
18 AT5G17890 DA1-related protein 4 CHILLING SENSITIVE 3, DA1-related
protein 4		 0.7 0.32 -0.31
19 AT1G65870 Disease resistance-responsive (dirigent-like protein)
family protein		 0.7 0.31 -0.34
20 AT5G20450 CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);
BEST Arabidopsis thaliana protein match is: Myosin family
protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast
hits to 1458 proteins in 355 species: Archae - 28; Bacteria
- 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses -
3; Other Eukaryotes - 412 (source: NCBI BLink).		 0.7 0.31 -0.33
21 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.69 0.34 -0.29
22 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 0.68 0.32 -0.31
23 AT5G42720 Glycosyl hydrolase family 17 protein 0.68 0.3 -0.34
24 AT5G51820 phosphoglucomutase ARABIDOPSIS THALIANA
PHOSPHOGLUCOMUTASE,
phosphoglucomutase, PGM1,
STARCH-FREE 1		 0.68 0.31 -0.32
25 AT5G10620 methyltransferases 0.67 0.31 -0.32
26 AT5G16180 ortholog of maize chloroplast splicing factor CRS1 ARABIDOPSIS ORTHOLOG OF MAIZE
CHLOROPLAST SPLICING FACTOR CRS1,
ortholog of maize chloroplast
splicing factor CRS1		 0.67 0.31 -0.33
27 AT4G01130 GDSL-like Lipase/Acylhydrolase superfamily protein 0.67 0.32 -0.31
28 AT1G78310 VQ motif-containing protein -0.67 0.32 -0.3
29 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.33
30 AT1G66540 Cytochrome P450 superfamily protein 0.66 0.31 -0.31
31 AT2G31480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05894.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.65 0.32 -0.3
32 AT4G13630 Protein of unknown function, DUF593 0.65 0.31 -0.31
33 AT4G22960 Protein of unknown function (DUF544) -0.65 0.33 -0.32
34 AT5G17880 disease resistance protein (TIR-NBS-LRR class) constitutive shade-avoidance1 0.65 0.32 -0.34
35 AT5G17240 SET domain group 40 SET domain group 40 0.65 0.33 -0.31
36 AT1G62850 Class I peptide chain release factor 0.65 0.31 -0.34
37 AT1G61900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
anchored to plasma membrane, plasma membrane, anchored to
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast
hits to 65 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.33 -0.32
38 AT1G61240 Protein of unknown function (DUF707) 0.65 0.31 -0.3
39 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 0.64 0.29 -0.32
40 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 0.64 0.35 -0.3
41 AT1G63540 hydroxyproline-rich glycoprotein family protein -0.64 0.35 -0.3
42 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 0.63 0.33 -0.32
43 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.63 0.32 -0.31
44 AT1G10070 branched-chain amino acid transaminase 2 branched-chain amino acid
transaminase 2, branched-chain
amino acid transaminase 2		 -0.63 0.31 -0.32
45 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 0.62 0.31 -0.33
46 AT4G03060 AOP2 (ALKENYL HYDROXALKYL PRODUCING 2); oxidoreductase,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and
incorporation of one atom each of oxygen into both donors		 alkenyl hydroxalkyl producing 2 0.62 0.3 -0.33
47 AT4G11080 HMG (high mobility group) box protein 3xHigh Mobility Group-box1 0.62 0.3 -0.32
48 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 0.62 0.31 -0.33
49 AT1G67800 Copine (Calcium-dependent phospholipid-binding protein)
family		 -0.62 0.32 -0.29
50 AT4G03050 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP3 -0.61 0.31 -0.32
51 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein 0.61 0.32 -0.33
52 AT1G59520 CW7 CW7 0.61 0.31 -0.29
53 AT1G47900 Plant protein of unknown function (DUF869) 0.61 0.3 -0.3
54 AT4G08480 mitogen-activated protein kinase kinase kinase 9 mitogen-activated protein kinase
kinase kinase 9, MAPK/ERK KINASE
KINASE 2		 0.61 0.32 -0.32
55 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.6 0.3 -0.34
56 AT5G15920 structural maintenance of chromosomes 5 EMBRYO DEFECTIVE 2782, structural
maintenance of chromosomes 5		 0.6 0.31 -0.32
57 AT1G72220 RING/U-box superfamily protein -0.6 0.32 -0.31
58 AT1G79000 histone acetyltransferase of the CBP family 1 ARABIDOPSIS HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 1, ARABIDOPSIS THALIANA
P300/CBP ACETYLTRANSFERASE-RELATED
PROTEIN 2, histone
acetyltransferase of the CBP
family 1, P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
2		 0.6 0.31 -0.31
59 AT4G05040 ankyrin repeat family protein 0.6 0.32 -0.3
60 AT4G24390 RNI-like superfamily protein auxin signaling F-box 4 0.59 0.3 -0.3
61 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.32 -0.28
62 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 0.59 0.29 -0.32
63 AT4G16870 transposable element gene 0.58 0.3 -0.3
64 AT1G52100 Mannose-binding lectin superfamily protein 0.58 0.29 -0.3
65 AT1G77640 Integrase-type DNA-binding superfamily protein -0.58 0.32 -0.31
66 AT3G54500 BEST Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183
Blast hits to 175 proteins in 44 species: Archae - 0;
Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120;
Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).		 0.58 0.3 -0.32
67 AT5G12430 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 16 0.58 0.31 -0.34
68 AT3G14395 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.32 -0.33
69 AT5G20620 ubiquitin 4 ubiquitin 4 -0.58 0.31 -0.3
70 AT1G78970 lupeol synthase 1 ARABIDOPSIS THALIANA LUPEOL
SYNTHASE 1, lupeol synthase 1		 0.58 0.32 -0.31
71 AT5G24760 GroES-like zinc-binding dehydrogenase family protein -0.57 0.32 -0.29
72 AT4G13460 SU(VAR)3-9 homolog 9 SETDOMAIN GROUP 22, SET22,
SU(VAR)3-9 homolog 9		 0.57 0.34 -0.29
73 AT5G42280 Cysteine/Histidine-rich C1 domain family protein 0.57 0.33 -0.32
74 AT1G50970 Membrane trafficking VPS53 family protein 0.57 0.3 -0.3
75 AT1G01060 Homeodomain-like superfamily protein LATE ELONGATED HYPOCOTYL, LATE
ELONGATED HYPOCOTYL 1		 0.57 0.34 -0.31
76 AT5G27110 Tetratricopeptide repeat (TPR)-like superfamily protein 0.57 0.3 -0.3
77 AT5G50110 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.57 0.31 -0.33
78 AT1G60460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; Has
23 Blast hits to 23 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.34 -0.32
79 AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein 0.57 0.3 -0.33
80 AT2G16700 actin depolymerizing factor 5 actin depolymerizing factor 5,
ATADF5		 -0.57 0.31 -0.31
81 AT5G24620 Pathogenesis-related thaumatin superfamily protein 0.57 0.31 -0.3
82 AT5G28310 NAD(P)-binding Rossmann-fold superfamily protein 0.57 0.35 -0.33
83 AT4G22280 F-box/RNI-like superfamily protein -0.56 0.32 -0.35
84 AT4G22330 Alkaline phytoceramidase (aPHC) ATCES1 -0.56 0.33 -0.3
85 AT1G80900 magnesium transporter 1 MAGNESIUM TRANSPORTER 1, magnesium
transporter 1, MRS2-10		 -0.54 0.31 -0.31
86 AT3G01840 Protein kinase superfamily protein -0.54 0.3 -0.32
87 AT4G36380 Cytochrome P450 superfamily protein ROTUNDIFOLIA 3 -0.54 0.33 -0.3
88 AT5G18070 phosphoglucosamine mutase-related DNA-DAMAGE-REPAIR/TOLERATION 101 -0.53 0.3 -0.32
89 AT5G54400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.52 0.3 -0.33
90 AT3G42480 transposable element gene -0.51 0.32 -0.29
91 AT4G08320 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 8 -0.51 0.33 -0.32
92 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 -0.5 0.32 -0.32
93 AT2G15060 transposable element gene -0.49 0.31 -0.32
94 AT1G50040 Protein of unknown function (DUF1005) -0.49 0.32 -0.33
95 AT5G07070 CBL-interacting protein kinase 2 CBL-interacting protein kinase 2,
SNF1-RELATED PROTEIN KINASE 3.2		 -0.48 0.31 -0.34
96 AT5G06850 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.48 0.31 -0.31
97 AT1G55560 SKU5 similar 14 SKU5 similar 14 -0.45 0.31 -0.33
98 AT3G17220 pectin methylesterase inhibitor 2 ATPMEI2, pectin methylesterase
inhibitor 2		 -0.45 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
99 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine 0.95 0.44 -0.47 C0038
100 C0183 MST_3033.1 - - - 0.94 0.45 -0.43
101 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.89 0.44 -0.47 C0033
102 C0037 5-Methylsulfinyl-n-pentylglucosinolate - 5-Methylsulfinylpentyl glucosinolate glucosinolate biosynthesis from trihomomethionine 0.66 0.33 -0.32 C0037
103 C0187 Neoeriocitrin - - - -0.65 0.43 -0.47
104 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.64 0.43 -0.41 C0035