AT5G25990 : -
Query Information
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AGICode AT5G25990
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 1 0.33 -0.33
2 AT5G49140 Disease resistance protein (TIR-NBS-LRR class) family -0.71 0.33 -0.3
3 AT1G77780 Glycosyl hydrolase superfamily protein -0.68 0.32 -0.31
4 AT2G23360 Plant protein of unknown function (DUF869) 0.68 0.31 -0.32
5 AT4G10280 RmlC-like cupins superfamily protein -0.67 0.32 -0.3
6 AT2G44590 DYNAMIN-like 1D DYNAMIN-like 1D, DYNAMIN-like 1D 0.66 0.3 -0.34
7 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.65 0.3 -0.31
8 AT2G04830 Protein of unknown function (DUF295) 0.65 0.3 -0.3
9 AT4G37670 N-acetyl-l-glutamate synthase 2 N-acetyl-l-glutamate synthase 2 -0.65 0.33 -0.32
10 AT5G50410 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.29 -0.32
11 AT2G01210 Leucine-rich repeat protein kinase family protein 0.64 0.3 -0.33
12 AT1G21510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cotyledon; Has
380 Blast hits to 286 proteins in 63 species: Archae - 0;
Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13;
Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink).		 -0.64 0.3 -0.3
13 AT3G16100 RAB GTPase homolog G3C ATRAB7D, RAB GTPase homolog G3C,
RAB GTPase homolog G3C		 -0.63 0.28 -0.32
14 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.31 -0.31
15 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.31
16 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.33 -0.31
17 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.62 0.33 -0.3
18 AT5G15070 Phosphoglycerate mutase-like family protein 0.62 0.34 -0.3
19 AT2G22370 unknown protein; Has 127 Blast hits to 127 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.62 0.31 -0.31
20 AT5G51880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.62 0.29 -0.32
21 AT4G11260 phosphatase-related ATSGT1B, ENHANCED DOWNY MILDEW 1,
ENHANCER OF TIR1-1 AUXIN
RESISTANCE 3, RPR1, SGT1B		 -0.61 0.34 -0.32
22 AT4G30200 vernalization5/VIN3-like vernalization5/VIN3-like 1,
VIN3-Like 2		 0.61 0.3 -0.32
23 AT4G33800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.31 -0.28
24 AT3G04150 RmlC-like cupins superfamily protein 0.61 0.33 -0.32
25 AT3G51040 RTE1-homolog RTE1-homolog -0.61 0.29 -0.33
26 AT2G26970 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.6 0.33 -0.32
27 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 0.6 0.31 -0.33
28 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.31 -0.32
29 AT3G22350 F-box and associated interaction domains-containing protein 0.59 0.29 -0.3
30 AT3G43100 transposable element gene 0.59 0.32 -0.32
31 AT4G35000 ascorbate peroxidase 3 ascorbate peroxidase 3 -0.59 0.28 -0.3
32 AT4G14420 HR-like lesion-inducing protein-related -0.59 0.31 -0.31
33 AT1G76860 Small nuclear ribonucleoprotein family protein -0.59 0.32 -0.33
34 AT3G60830 actin-related protein 7 ARP7, actin-related protein 7,
actin-related protein 7		 -0.59 0.31 -0.32
35 AT1G23220 Dynein light chain type 1 family protein -0.59 0.32 -0.32
36 AT3G04750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.32 -0.3
37 AT5G64470 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 12 -0.58 0.31 -0.31
38 AT3G21590 Senescence/dehydration-associated protein-related -0.58 0.32 -0.32
39 AT3G16550 DEGP protease 12 DEGP protease 12 0.58 0.3 -0.33
40 AT2G15720 transposable element gene 0.58 0.3 -0.31
41 AT3G04020 unknown protein; Has 26 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.58 0.33 -0.3
42 AT4G09720 RAB GTPase homolog G3A RAB GTPase homolog G3A, RAB GTPase
homolog G3A		 -0.58 0.31 -0.3
43 AT1G63590 Receptor-like protein kinase-related family protein -0.58 0.3 -0.32
44 AT2G25780 Protein of unknown function (DUF1677) -0.57 0.31 -0.31
45 AT2G13270 transposable element gene 0.57 0.31 -0.32
46 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 0.57 0.32 -0.34
47 AT3G32080 transposable element gene 0.57 0.33 -0.32
48 AT5G56330 alpha carbonic anhydrase 8 alpha carbonic anhydrase 8, A.
THALIANA ALPHA CARBONIC ANHYDRASE
8		 -0.57 0.3 -0.32
49 AT1G48170 unknown protein; Has 78 Blast hits to 78 proteins in 34
species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.32 -0.33
50 AT4G39720 VQ motif-containing protein 0.56 0.32 -0.32
51 AT1G79770 Protein of unknown function (DUF1677) -0.56 0.32 -0.31
52 AT5G48750 Cytochrome b561/ferric reductase transmembrane with DOMON
related domain		 -0.56 0.3 -0.32
53 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 0.56 0.3 -0.32
54 AT1G08860 Calcium-dependent phospholipid-binding Copine family
protein		 BONZAI 3 0.56 0.32 -0.29
55 AT3G05710 syntaxin of plants 43 ATSYP43, syntaxin of plants 43 -0.56 0.31 -0.33
56 AT5G47510 Sec14p-like phosphatidylinositol transfer family protein -0.55 0.32 -0.31
57 AT2G44250 Protein of Unknown Function (DUF239) 0.55 0.3 -0.31
58 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein -0.55 0.32 -0.3
59 AT5G51420 long-chain-alcohol O-fatty-acyltransferase family protein /
wax synthase family protein		 0.55 0.32 -0.32
60 AT3G18770 Autophagy-related protein 13 0.55 0.3 -0.31
61 AT4G11340 Disease resistance protein (TIR-NBS-LRR class) family 0.55 0.33 -0.32
62 AT4G29340 profilin 4 profilin 4 -0.55 0.34 -0.32
63 AT5G57520 zinc finger protein 2 ZINC FINGER PROTEIN 2, zinc finger
protein 2		 0.55 0.31 -0.32
64 AT1G19780 cyclic nucleotide gated channel 8 cyclic nucleotide gated channel
8, CNGC8, cyclic nucleotide gated
channel 8		 -0.55 0.3 -0.31
65 AT5G53470 acyl-CoA binding protein 1 ACYL-COA BINDING PROTEIN, acyl-CoA
binding protein 1		 -0.55 0.31 -0.33
66 AT1G30020 Protein of unknown function, DUF538 0.55 0.31 -0.3
67 AT5G17560 BolA-like family protein -0.54 0.31 -0.32
68 AT3G25650 SKP1-like 15 SKP1-like 15, SKP1-like 15 0.54 0.32 -0.3
69 AT3G19780 LOCATED IN: endomembrane system; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF179
(InterPro:IPR003774), Thioredoxin fold
(InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF179)
(TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32
species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi -
3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.54 0.31 -0.32
70 AT1G56030 RING/U-box superfamily protein -0.54 0.32 -0.34
71 AT3G27510 Cysteine/Histidine-rich C1 domain family protein 0.54 0.33 -0.32
72 AT2G10690 transposable element gene -0.54 0.34 -0.31
73 AT5G48280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.54 0.33 -0.31
74 AT2G04520 Nucleic acid-binding, OB-fold-like protein -0.54 0.32 -0.32
75 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.3 -0.32
76 AT2G30960 unknown protein; Has 4906 Blast hits to 2903 proteins in
334 species: Archae - 5; Bacteria - 381; Metazoa - 1639;
Fungi - 509; Plants - 244; Viruses - 5; Other Eukaryotes -
2123 (source: NCBI BLink).		 -0.54 0.31 -0.34
77 AT2G28260 cyclic nucleotide-gated channel 15 cyclic nucleotide-gated channel
15, cyclic nucleotide-gated
channel 15		 0.54 0.31 -0.33
78 AT1G75510 Transcription initiation factor IIF, beta subunit -0.54 0.3 -0.33
79 AT1G43870 transposable element gene -0.54 0.3 -0.32
80 AT1G04290 Thioesterase superfamily protein -0.54 0.33 -0.31
81 AT5G57670 Protein kinase superfamily protein 0.54 0.3 -0.3
82 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 -0.53 0.33 -0.32
83 AT2G44530 Phosphoribosyltransferase family protein -0.53 0.32 -0.33
84 AT4G30940 BTB/POZ domain with WD40/YVTN repeat-like protein 0.53 0.31 -0.3
85 AT4G31900 chromatin remodeling factor, putative PICKLE RELATED 2 0.53 0.31 -0.32
86 AT5G23650 Homeodomain-like transcriptional regulator 0.53 0.32 -0.31
87 AT4G31960 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.35 -0.3
88 AT4G30970 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.3 -0.31
89 AT1G69240 methyl esterase 15 ARABIDOPSIS THALIANA METHYL
ESTERASE 15, methyl esterase 15,
ROOT HAIR SPECIFIC 9		 0.53 0.31 -0.3
90 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.53 0.3 -0.29
91 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90		 0.53 0.34 -0.31
92 AT1G42690 transposable element gene -0.52 0.3 -0.3
93 AT1G74810 HCO3- transporter family BOR5 -0.52 0.32 -0.31
94 AT2G40900 nodulin MtN21 /EamA-like transporter family protein 0.52 0.29 -0.3
95 AT4G01930 Cysteine/Histidine-rich C1 domain family protein 0.52 0.34 -0.31
96 AT1G06270 Pentatricopeptide repeat (PPR) superfamily protein 0.52 0.31 -0.31
97 AT1G67670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24405.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.32 -0.32
98 AT5G40930 translocase of outer membrane 20-4 translocase of outer membrane 20-4 -0.52 0.32 -0.29
99 AT4G15710 unknown protein; Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.33 -0.33
100 AT4G04170 transposable element gene -0.52 0.31 -0.31
101 AT1G71690 Protein of unknown function (DUF579) 0.52 0.32 -0.3
102 AT5G08530 51 kDa subunit of complex I 51 kDa subunit of complex I -0.52 0.31 -0.32
103 AT3G43740 Leucine-rich repeat (LRR) family protein -0.52 0.31 -0.29
104 AT1G60540 pseudogene of the dynamin family Dynamin related protein 4B 0.52 0.3 -0.34
105 AT1G22010 unknown protein; Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.32 -0.29
106 AT3G19140 RING/U-box superfamily protein DAY NEUTRAL FLOWERING -0.52 0.3 -0.32
107 AT2G05500 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.32 -0.32
108 AT3G15140 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.51 0.32 -0.31
109 AT2G30240 Cation/hydrogen exchanger family protein ATCHX13, CATION/H+ EXCHANGER 13 -0.51 0.32 -0.31
110 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein -0.51 0.31 -0.3
111 AT5G45230 Disease resistance protein (TIR-NBS-LRR class) family -0.51 0.32 -0.32
112 AT5G51800 Protein kinase superfamily protein -0.51 0.29 -0.33
113 AT4G08450 Disease resistance protein (TIR-NBS-LRR class) family -0.51 0.34 -0.32
114 AT1G77790 Glycosyl hydrolase superfamily protein -0.51 0.29 -0.32
115 AT1G31940 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.51 0.31 -0.32
116 AT1G60380 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.51 0.35 -0.3
117 AT1G25460 NAD(P)-binding Rossmann-fold superfamily protein -0.51 0.32 -0.33
118 AT5G51230 VEFS-Box of polycomb protein AtEMF2, CYR1, EMBRYONIC FLOWER 2,
CYTOKININ RESISTANT 1		 -0.51 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
119 C0247 Sulfoquinovosyldiacylglycerol-34:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.72 0.48 -0.48 C0247
120 C0188 Nicotine (-)-Nicotine Nicotine - 0.71 0.44 -0.48 C0188
121 C0081 Digalactosyldiacylglycerol-36:2 - Digalactosyldiacylglycerol-36:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.67 0.49 -0.48 C0081
122 C0084 Digalactosyldiacylglycerol-36:5 - Digalactosyldiacylglycerol-36:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.66 0.52 -0.49 C0084