AT5G25060 : -
Query Information
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AGICode AT5G25060
Description RNA recognition motif (RRM)-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G25060 RNA recognition motif (RRM)-containing protein 1 0.32 -0.31
2 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.64 0.31 -0.31
3 AT5G03200 RING/U-box superfamily protein 0.63 0.31 -0.31
4 AT5G28290 NIMA-related kinase 3 NIMA-related kinase 3,
NIMA-related kinase 3		 0.62 0.31 -0.32
5 AT5G17780 alpha/beta-Hydrolases superfamily protein 0.57 0.32 -0.32
6 AT3G52640 Zn-dependent exopeptidases superfamily protein 0.57 0.32 -0.31
7 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.56 0.32 -0.31
8 AT3G06940 transposable element gene 0.55 0.31 -0.32
9 AT5G47230 ethylene responsive element binding factor 5 ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR- 5, ETHYLENE
RESPONSIVE ELEMENT BINDING FACTOR
5, ethylene responsive element
binding factor 5		 -0.55 0.33 -0.31
10 AT3G01780 ARM repeat superfamily protein TPLATE 0.55 0.31 -0.32
11 AT5G61600 ethylene response factor 104 ethylene response factor 104 -0.55 0.3 -0.32
12 AT4G03940 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 -0.54 0.33 -0.34
13 AT3G09240 Protein kinase protein with tetratricopeptide repeat domain -0.54 0.3 -0.32
14 AT1G07300 josephin protein-related -0.53 0.33 -0.33
15 AT1G62350 Pentatricopeptide repeat (PPR) superfamily protein 0.53 0.33 -0.29
16 AT1G51440 alpha/beta-Hydrolases superfamily protein 0.53 0.33 -0.32
17 AT4G32500 K+ transporter 5 K+ transporter 5, K+ transporter 5 -0.52 0.31 -0.31
18 AT5G51190 Integrase-type DNA-binding superfamily protein -0.52 0.32 -0.29
19 AT4G27280 Calcium-binding EF-hand family protein -0.52 0.3 -0.3
20 AT2G31770 RING/U-box superfamily protein ARIADNE 9, ARABIDOPSIS ARIADNE 9 -0.52 0.31 -0.3
21 AT1G75600 Histone superfamily protein -0.51 0.33 -0.3
22 AT1G53490 RING/U-box superfamily protein 0.51 0.32 -0.31
23 AT2G27760 tRNAisopentenyltransferase 2 tRNAisopentenyltransferase 2,
IPPT, tRNAisopentenyltransferase 2		 0.51 0.29 -0.32
24 AT3G50060 myb domain protein 77 myb domain protein 77 -0.51 0.31 -0.32
25 AT1G45180 RING/U-box superfamily protein -0.5 0.29 -0.32
26 AT4G00350 MATE efflux family protein -0.5 0.31 -0.32
27 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.5 0.31 -0.32
28 AT1G53260 LOCATED IN: endomembrane system; BEST Arabidopsis thaliana
protein match is: cobalt ion binding (TAIR:AT3G15000.1);
Has 32763 Blast hits to 18534 proteins in 929 species:
Archae - 22; Bacteria - 2420; Metazoa - 15140; Fungi -
5401; Plants - 5313; Viruses - 485; Other Eukaryotes - 3982
(source: NCBI BLink).		 0.5 0.3 -0.3
29 AT5G60320 Concanavalin A-like lectin protein kinase family protein -0.49 0.32 -0.35
30 AT4G17490 ethylene responsive element binding factor 6 ethylene responsive element
binding factor 6, ERF-6-6,
ethylene responsive element
binding factor 6		 -0.49 0.32 -0.31
31 AT2G44430 DNA-binding bromodomain-containing protein 0.49 0.33 -0.32
32 AT4G00650 FRIGIDA-like protein FLOWERING LOCUS A, FRIGIDA 0.49 0.33 -0.33
33 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 0.49 0.29 -0.29
34 AT1G72070 Chaperone DnaJ-domain superfamily protein 0.49 0.32 -0.31
35 AT5G17910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G29620.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.49 0.31 -0.33
36 AT4G21200 gibberellin 2-oxidase 8 ARABIDOPSIS THALIANA GIBBERELLIN
2-OXIDASE 8, gibberellin 2-oxidase
8		 0.49 0.32 -0.31
37 AT1G10620 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 11, proline-rich
extensin-like receptor kinase 11		 0.49 0.31 -0.31
38 AT1G72220 RING/U-box superfamily protein -0.48 0.3 -0.3
39 AT2G44840 ethylene-responsive element binding factor 13 ETHYLENE-RESPONSIVE ELEMENT
BINDING FACTOR 13, EREBP,
ethylene-responsive element
binding factor 13		 -0.48 0.34 -0.31
40 AT2G18270 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.47 0.31 -0.32
41 AT3G10460 Plant self-incompatibility protein S1 family -0.47 0.32 -0.32
42 AT1G61630 equilibrative nucleoside transporter 7 ATENT7, equilibrative nucleoside
transporter 7		 -0.47 0.32 -0.33
43 AT4G07750 transposable element gene -0.46 0.32 -0.33
44 AT1G17455 ELF4-like 4 ELF4-like 4 -0.46 0.3 -0.33
45 AT1G18990 Protein of unknown function, DUF593 -0.46 0.33 -0.32
46 AT5G40090 Disease resistance protein (TIR-NBS class) -0.45 0.31 -0.31
47 AT3G09930 GDSL-like Lipase/Acylhydrolase superfamily protein 0.45 0.34 -0.31
48 AT1G75140 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.45 0.33 -0.32
49 AT5G18880 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 -0.44 0.32 -0.3
50 AT1G26700 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 14,
MILDEW RESISTANCE LOCUS O 14		 -0.44 0.32 -0.32
51 AT3G55680 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.43 0.31 -0.3
52 AT5G08250 Cytochrome P450 superfamily protein -0.43 0.3 -0.32
53 AT3G19690 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.43 0.32 -0.29
54 AT2G10740 transposable element gene -0.42 0.28 -0.33
55 AT1G43630 Protein of unknown function (DUF793) -0.42 0.33 -0.33
56 AT3G31023 transposable element gene -0.42 0.33 -0.33
57 AT2G01960 tetraspanin14 tetraspanin14 -0.42 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
58 C0096 Gluconic acid - D-Gluconate - 0.73 0.46 -0.47 C0096