AT5G25390 : shine3
Query Information
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AGICode AT5G25390
Description Integrase-type DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G25390 Integrase-type DNA-binding superfamily protein shine3 1 0.33 -0.32
2 AT3G02810 Protein kinase superfamily protein -0.6 0.3 -0.29
3 AT4G01440 nodulin MtN21 /EamA-like transporter family protein 0.57 0.31 -0.32
4 AT3G58680 multiprotein bridging factor 1B MULTIPROTEIN BRIDGING FACTOR 1B,
multiprotein bridging factor 1B		 -0.57 0.33 -0.33
5 AT1G05170 Galactosyltransferase family protein 0.56 0.31 -0.31
6 AT1G51490 beta glucosidase 36 beta glucosidase 36 0.55 0.32 -0.3
7 AT1G20940 F-box family protein 0.55 0.3 -0.3
8 AT5G23760 Copper transport protein family 0.55 0.32 -0.31
9 AT5G16380 Protein of unknown function, DUF538 0.54 0.31 -0.32
10 AT2G17470 Aluminium activated malate transporter family protein ALuminium activated Malate
Transporter 6, AtALMT6		 0.54 0.3 -0.33
11 AT3G25150 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.53 0.34 -0.3
12 AT4G39640 gamma-glutamyl transpeptidase 1 gamma-glutamyl transpeptidase 1 0.53 0.31 -0.32
13 AT1G23700 Protein kinase superfamily protein 0.53 0.32 -0.33
14 AT2G17960 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.32 -0.33
15 AT5G11610 Exostosin family protein 0.52 0.32 -0.32
16 AT4G37240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.52 0.29 -0.33
17 AT5G02200 far-red-elongated hypocotyl1-like far-red-elongated hypocotyl1-like 0.52 0.3 -0.31
18 AT1G18180 Protein of unknown function (DUF1295) -0.52 0.32 -0.32
19 AT1G69220 Protein kinase superfamily protein SIK1 -0.52 0.32 -0.34
20 AT1G35720 annexin 1 annexin 1, ATOXY5, OXY5 0.52 0.32 -0.32
21 AT1G76510 ARID/BRIGHT DNA-binding domain-containing protein -0.51 0.31 -0.32
22 AT2G30600 BTB/POZ domain-containing protein -0.51 0.3 -0.32
23 AT2G42400 vascular plant one zinc finger protein 2 VASCULAR PLANT ONE ZINC FINGER
PROTEIN 2, vascular plant one zinc
finger protein 2		 -0.5 0.33 -0.3
24 AT1G32930 Galactosyltransferase family protein -0.5 0.31 -0.31
25 AT1G69380 Protein of unknown function (DUF155) RETARDED ROOT GROWTH -0.5 0.31 -0.31
26 AT3G13450 Transketolase family protein DARK INDUCIBLE 4 -0.5 0.31 -0.29
27 AT4G12540 unknown protein; Has 29 Blast hits to 26 proteins in 11
species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.49 0.31 -0.3
28 AT5G54570 beta glucosidase 41 beta glucosidase 41 0.49 0.31 -0.32
29 AT1G13570 F-box/RNI-like superfamily protein -0.49 0.31 -0.3
30 AT4G05570 transposable element gene 0.48 0.32 -0.32
31 AT5G56340 RING/U-box superfamily protein ATCRT1 -0.48 0.35 -0.31
32 AT4G15710 unknown protein; Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.48 0.31 -0.33
33 AT3G54580 Proline-rich extensin-like family protein -0.47 0.3 -0.32
34 AT1G67760 TCP-1/cpn60 chaperonin family protein 0.47 0.29 -0.32
35 AT1G20290 SWI-SNF-related chromatin binding protein -0.47 0.32 -0.31
36 AT5G27210 Protein of unknown function, transmembrane-40 -0.47 0.32 -0.33
37 AT5G62390 BCL-2-associated athanogene 7 BCL-2-associated athanogene 7,
BCL-2-associated athanogene 7		 -0.46 0.29 -0.35
38 AT5G67110 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ALCATRAZ -0.46 0.31 -0.33
39 AT3G09180 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27
(InterPro:IPR021627); Has 112 Blast hits to 112 proteins in
38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi -
0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.46 0.32 -0.31
40 AT4G08270 BEST Arabidopsis thaliana protein match is: DNA binding
(TAIR:AT3G47680.1); Has 29 Blast hits to 29 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.45 0.33 -0.34
41 AT1G54550 F-box and associated interaction domains-containing protein -0.45 0.33 -0.35
42 AT5G66370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G51020.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.44 0.33 -0.34
43 AT5G55590 Pectin lyase-like superfamily protein QUARTET 1 0.44 0.32 -0.31
44 AT5G28650 WRKY DNA-binding protein 74 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 74, WRKY
DNA-binding protein 74		 -0.44 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
45 C0197 Phosphatidylcholine-36:1 - Phosphatidylcholine-36:1 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.62 0.5 -0.51 C0197
46 C0044 7-Methylsulfinyl-n-heptylglucosinolate - 7-Methylsulfinylheptyl glucosinolate glucosinolate biosynthesis from pentahomomethionine 0.49 0.3 -0.31 C0044