AT5G24670 : EMBRYO DEFECTIVE 2820
Query Information
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AGICode AT5G24670
Description Cytidine/deoxycytidylate deaminase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 1 0.29 -0.32
2 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA 0.8 0.3 -0.31
3 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 0.78 0.33 -0.29
4 AT4G21326 subtilase 3.12 subtilase 3.12, subtilase 3.12 0.76 0.33 -0.32
5 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.74 0.31 -0.31
6 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 -0.73 0.32 -0.32
7 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.73 0.32 -0.33
8 AT4G29380 protein kinase family protein / WD-40 repeat family protein Arabidopsis thaliana vacuolar
protein sorting 15, vacuolar
protein sorting 15		 0.72 0.31 -0.31
9 AT1G60490 vacuolar protein sorting 34 ATVPS34, PHOSPATIDYLINOSITOL
3-KINASE, vacuolar protein sorting
34		 0.72 0.32 -0.32
10 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.72 0.31 -0.31
11 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.72 0.31 -0.33
12 AT2G17975 zinc finger (Ran-binding) family protein 0.71 0.33 -0.3
13 AT4G25570 Cytochrome b561/ferric reductase transmembrane protein
family		 ACYB-2 -0.7 0.3 -0.35
14 AT2G39340 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3A, yeast Sac3 homolog A 0.7 0.32 -0.32
15 AT3G43220 Phosphoinositide phosphatase family protein 0.69 0.31 -0.31
16 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.69 0.32 -0.31
17 AT2G46560 transducin family protein / WD-40 repeat family protein 0.69 0.32 -0.32
18 AT4G18130 phytochrome E phytochrome E 0.68 0.3 -0.3
19 AT3G27260 global transcription factor group E8 global transcription factor group
E8		 0.68 0.32 -0.33
20 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.68 0.3 -0.31
21 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 0.68 0.3 -0.3
22 AT4G32660 Protein kinase superfamily protein AME3 0.68 0.32 -0.31
23 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 0.67 0.32 -0.32
24 AT4G12760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.67 0.32 -0.32
25 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 0.67 0.31 -0.32
26 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.67 0.33 -0.32
27 AT5G01620 TRICHOME BIREFRINGENCE-LIKE 35 TRICHOME BIREFRINGENCE-LIKE 35 -0.67 0.33 -0.33
28 AT4G34140 D111/G-patch domain-containing protein 0.67 0.33 -0.33
29 AT2G41810 Protein of unknown function, DUF642 -0.66 0.31 -0.32
30 AT5G26610 D111/G-patch domain-containing protein 0.66 0.3 -0.28
31 AT1G24330 ARM repeat superfamily protein 0.66 0.32 -0.32
32 AT2G41790 Insulinase (Peptidase family M16) family protein 0.66 0.3 -0.34
33 AT1G66390 myb domain protein 90 ATMYB90, myb domain protein 90,
PRODUCTION OF ANTHOCYANIN PIGMENT
2		 0.66 0.3 -0.31
34 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.65 0.3 -0.32
35 AT4G00040 Chalcone and stilbene synthase family protein 0.65 0.33 -0.29
36 AT2G27490 dephospho-CoA kinase family ATCOAE 0.65 0.32 -0.31
37 AT4G11800 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.65 0.32 -0.32
38 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 -0.65 0.33 -0.31
39 AT5G62760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.32 -0.3
40 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 0.64 0.32 -0.31
41 AT5G11000 Plant protein of unknown function (DUF868) -0.64 0.29 -0.31
42 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.34 -0.32
43 AT5G04220 Calcium-dependent lipid-binding (CaLB domain) family
protein		 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3,
synaptotagmin 3, SYTC		 0.63 0.3 -0.33
44 AT1G79280 nuclear pore anchor TRANSLOCATED PROMOTER REGION,
nuclear pore anchor		 0.63 0.33 -0.3
45 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.63 0.33 -0.33
46 AT2G44240 Protein of Unknown Function (DUF239) -0.63 0.29 -0.33
47 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 0.63 0.32 -0.33
48 AT1G79830 golgin candidate 5 golgin candidate 5 0.62 0.32 -0.32
49 AT2G46930 Pectinacetylesterase family protein -0.62 0.29 -0.3
50 AT1G80290 Nucleotide-diphospho-sugar transferases superfamily protein -0.62 0.3 -0.31
51 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.62 0.29 -0.33
52 AT1G62130 AAA-type ATPase family protein 0.62 0.33 -0.3
53 AT1G54260 winged-helix DNA-binding transcription factor family
protein		 0.62 0.32 -0.31
54 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.31 -0.3
55 AT4G23980 auxin response factor 9 auxin response factor 9 0.62 0.32 -0.31
56 AT1G47210 cyclin-dependent protein kinase 3;2 cyclin-dependent protein kinase
3;2		 -0.62 0.3 -0.31
57 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 0.61 0.31 -0.31
58 AT2G25760 Protein kinase family protein 0.61 0.32 -0.31
59 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 0.61 0.32 -0.32
60 AT2G16360 Ribosomal protein S25 family protein -0.61 0.3 -0.31
61 AT2G42270 U5 small nuclear ribonucleoprotein helicase 0.61 0.34 -0.32
62 AT5G36150 putative pentacyclic triterpene synthase 3 putative pentacyclic triterpene
synthase 3, putative pentacyclic
triterpene synthase 3		 -0.61 0.32 -0.33
63 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.61 0.3 -0.33
64 AT3G56890 F-box associated ubiquitination effector family protein 0.61 0.33 -0.31
65 AT4G38410 Dehydrin family protein -0.61 0.32 -0.31
66 AT5G37140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.31 -0.3
67 AT3G11500 Small nuclear ribonucleoprotein family protein -0.6 0.31 -0.32
68 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 0.6 0.3 -0.33
69 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.6 0.31 -0.3
70 AT5G40200 DegP protease 9 DegP protease 9 -0.6 0.31 -0.31
71 AT5G05310 TLC ATP/ADP transporter 0.6 0.33 -0.32
72 AT1G51740 syntaxin of plants 81 ATSYP81, ARABIDOPSIS THALIANA
ORTHOLOG OF YEAST UFE1 (UNKNOWN
FUNCTION-ESSENTIAL 1), syntaxin of
plants 81, ORTHOLOG OF YEAST UFE1
(UNKNOWN FUNCTION-ESSENTIAL 1)		 0.6 0.31 -0.32
73 AT4G01990 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.32 -0.33
74 AT2G37950 RING/FYVE/PHD zinc finger superfamily protein -0.6 0.32 -0.34
75 AT5G14330 unknown protein; Has 8 Blast hits to 8 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.3
76 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 0.6 0.31 -0.32
77 AT1G69220 Protein kinase superfamily protein SIK1 0.6 0.32 -0.33
78 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 0.6 0.32 -0.33
79 AT5G13020 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML3, EMSY-like 3 0.59 0.35 -0.31
80 AT3G09160 RNA-binding (RRM/RBD/RNP motifs) family protein 0.59 0.32 -0.3
81 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.59 0.31 -0.31
82 AT5G57530 xyloglucan endotransglucosylase/hydrolase 12 AtXTH12, xyloglucan
endotransglucosylase/hydrolase 12		 -0.59 0.31 -0.29
83 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.59 0.34 -0.33
84 AT1G31600 RNA-binding (RRM/RBD/RNP motifs) family protein Arabidopsis thaliana tRNA
methyltransferase 9, tRNA
methyltransferase 9		 0.59 0.31 -0.3
85 AT1G27360 squamosa promoter-like 11 squamosa promoter-like 11 0.59 0.31 -0.3
86 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 -0.59 0.3 -0.31
87 AT5G65320 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.59 0.31 -0.33
88 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.59 0.29 -0.32
89 AT5G59380 methyl-CPG-binding domain 6 ATMBD6, methyl-CPG-binding domain
6		 -0.58 0.29 -0.31
90 AT5G26780 serine hydroxymethyltransferase 2 serine hydroxymethyltransferase 2 -0.58 0.35 -0.31
91 AT1G10470 response regulator 4 response regulator 4, RESPONCE
REGULATOR 1, INDUCED BY CYTOKININ
7, maternal effect embryo arrest 7		 -0.58 0.32 -0.31
92 AT1G13540 Protein of unknown function (DUF1262) -0.58 0.32 -0.3
93 AT5G20950 Glycosyl hydrolase family protein -0.58 0.32 -0.32
94 AT4G32390 Nucleotide-sugar transporter family protein -0.58 0.32 -0.33
95 AT2G35210 root and pollen arfgap AGD10, MATERNAL EFFECT EMBRYO
ARREST 28, root and pollen arfgap		 -0.58 0.32 -0.31
96 AT2G48150 glutathione peroxidase 4 glutathione peroxidase 4,
glutathione peroxidase 4		 -0.58 0.31 -0.32
97 AT2G20660 ralf-like 14 ralf-like 14 -0.57 0.32 -0.32
98 AT3G50870 GATA type zinc finger transcription factor family protein GATA TRANSCRIPTION FACTOR 18,
HANABA TANARU, MONOPOLE		 -0.57 0.32 -0.31
99 AT4G22250 RING/U-box superfamily protein -0.57 0.32 -0.31
100 AT3G19610 Plant protein of unknown function (DUF936) -0.57 0.3 -0.32
101 AT5G15230 GAST1 protein homolog 4 GAST1 protein homolog 4 -0.57 0.32 -0.32
102 AT1G29820 Magnesium transporter CorA-like family protein -0.56 0.32 -0.32
103 AT1G68100 ZIP metal ion transporter family IAA-ALANINE RESISTANT 1 -0.56 0.31 -0.31
104 AT2G23610 methyl esterase 3 ARABIDOPSIS THALIANA METHYL
ESTERASE 3, methyl esterase 3		 -0.55 0.31 -0.32
105 AT5G22400 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.55 0.3 -0.29
106 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.55 0.32 -0.3
107 AT2G01570 GRAS family transcription factor family protein REPRESSOR OF GA, REPRESSOR OF
GA1-3 1		 -0.55 0.33 -0.32