AT5G24870 : -
Query Information
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AGICode AT5G24870
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G24870 RING/U-box superfamily protein 1 0.32 -0.32
2 AT1G21000 PLATZ transcription factor family protein 0.8 0.32 -0.3
3 AT1G69790 Protein kinase superfamily protein 0.79 0.33 -0.33
4 AT1G75680 glycosyl hydrolase 9B7 glycosyl hydrolase 9B7, glycosyl
hydrolase 9B7		 -0.79 0.31 -0.33
5 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 0.78 0.3 -0.31
6 AT1G62640 3-ketoacyl-acyl carrier protein synthase III 3-ketoacyl-acyl carrier protein
synthase III		 -0.77 0.31 -0.3
7 AT1G10780 F-box/RNI-like superfamily protein -0.76 0.32 -0.33
8 AT5G35370 S-locus lectin protein kinase family protein 0.76 0.3 -0.32
9 AT1G11545 xyloglucan endotransglucosylase/hydrolase 8 xyloglucan
endotransglucosylase/hydrolase 8		 -0.75 0.31 -0.36
10 AT1G49510 embryo defective 1273 embryo defective 1273 -0.75 0.31 -0.31
11 AT5G65810 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 cotton Golgi-related 3 -0.74 0.33 -0.3
12 AT3G22460 O-acetylserine (thiol) lyase (OAS-TL) isoform A2 O-acetylserine (thiol) lyase
(OAS-TL) isoform A2		 0.74 0.33 -0.33
13 AT5G04760 Duplicated homeodomain-like superfamily protein 0.74 0.3 -0.31
14 AT5G18780 F-box/RNI-like superfamily protein 0.74 0.31 -0.32
15 AT4G28290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 45 Blast hits to 45 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.73 0.3 -0.31
16 AT4G18030 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.31 -0.31
17 AT2G43540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 27
Blast hits to 27 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.31 -0.33
18 AT5G16130 Ribosomal protein S7e family protein -0.73 0.3 -0.32
19 AT1G55850 cellulose synthase like E1 ATCSLE1, cellulose synthase like
E1		 0.73 0.32 -0.34
20 AT5G35360 acetyl Co-enzyme a carboxylase biotin carboxylase subunit acetyl Co-enzyme a carboxylase
biotin carboxylase subunit		 -0.73 0.3 -0.34
21 AT5G47070 Protein kinase superfamily protein 0.72 0.31 -0.32
22 AT3G45300 isovaleryl-CoA-dehydrogenase ATIVD,
isovaleryl-CoA-dehydrogenase,
ISOVALERYL-COA-DEHYDROGENASE		 0.72 0.32 -0.29
23 AT5G05170 Cellulose synthase family protein ATCESA3, ATH-B, CELLULOSE SYNTHASE
3, CONSTITUTIVE EXPRESSION OF VSP
1, ISOXABEN RESISTANT 1		 -0.72 0.31 -0.31
24 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 -0.72 0.31 -0.31
25 AT1G48610 AT hook motif-containing protein -0.71 0.33 -0.3
26 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 -0.71 0.34 -0.33
27 AT2G04280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.71 0.34 -0.31
28 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain -0.71 0.32 -0.3
29 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 -0.71 0.31 -0.34
30 AT3G10550 Myotubularin-like phosphatases II superfamily Arabidopsis thaliana myotubularin
1, myotubularin 1		 0.71 0.31 -0.32
31 AT1G34430 2-oxoacid dehydrogenases acyltransferase family protein embryo defective 3003 -0.71 0.31 -0.32
32 AT1G41830 SKU5-similar 6 SKU5 SIMILAR 6, SKU5-similar 6 -0.71 0.33 -0.32
33 AT1G64640 early nodulin-like protein 8 AtENODL8, early nodulin-like
protein 8		 -0.71 0.3 -0.32
34 AT3G23740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: C globular stage, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast
hits to 130 proteins in 48 species: Archae - 0; Bacteria -
16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0;
Other Eukaryotes - 25 (source: NCBI BLink).		 -0.7 0.31 -0.33
35 AT3G57610 adenylosuccinate synthase adenylosuccinate synthase -0.7 0.33 -0.3
36 AT4G22010 SKU5 similar 4 SKU5 similar 4 -0.7 0.32 -0.32
37 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 -0.7 0.34 -0.3
38 AT3G07870 F-box and associated interaction domains-containing protein 0.7 0.29 -0.31
39 AT1G12500 Nucleotide-sugar transporter family protein -0.7 0.32 -0.32
40 AT5G40830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.3 -0.31
41 AT4G02020 SET domain-containing protein EZA1, SET DOMAIN-CONTAINING
PROTEIN 10, SWINGER		 0.69 0.3 -0.32
42 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 -0.69 0.32 -0.33
43 AT5G52040 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 41, ATRSP41,
arginine/serine-rich splicing
factor 41		 -0.69 0.31 -0.35
44 AT4G27720 Major facilitator superfamily protein -0.69 0.33 -0.29
45 AT5G66730 C2H2-like zinc finger protein ENHYDROUS, INDETERMINATE DOMAIN 1 0.69 0.33 -0.32
46 AT5G02870 Ribosomal protein L4/L1 family -0.69 0.31 -0.31
47 AT1G55160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.33 -0.3
48 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 0.69 0.31 -0.27
49 AT2G35860 FASCICLIN-like arabinogalactan protein 16 precursor FASCICLIN-like arabinogalactan
protein 16 precursor		 -0.69 0.31 -0.34
50 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 0.68 0.32 -0.31
51 AT5G55730 FASCICLIN-like arabinogalactan 1 FASCICLIN-like arabinogalactan 1 -0.68 0.32 -0.33
52 AT5G04320 Shugoshin C terminus -0.68 0.32 -0.29
53 AT5G06660 Protein of unknown function DUF106, transmembrane -0.68 0.31 -0.31
54 AT1G47900 Plant protein of unknown function (DUF869) -0.68 0.31 -0.31
55 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 0.67 0.33 -0.31
56 AT4G00740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 QUASIMODO 3 -0.67 0.31 -0.31
57 AT3G03630 cysteine synthase 26 cysteine synthase 26 -0.67 0.31 -0.31
58 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.32
59 AT4G04960 Concanavalin A-like lectin protein kinase family protein 0.67 0.33 -0.32
60 AT5G04060 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.67 0.33 -0.31
61 AT2G22870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 embryo defective 2001 -0.67 0.31 -0.33
62 AT2G22230 Thioesterase superfamily protein -0.67 0.33 -0.33
63 AT1G77940 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.67 0.32 -0.32
64 AT5G20980 methionine synthase 3 methionine synthase 3, methionine
synthase 3		 -0.67 0.31 -0.31
65 AT1G30260 BEST Arabidopsis thaliana protein match is:
Galactosyltransferase family protein (TAIR:AT4G21060.1);
Has 30 Blast hits to 30 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.32
66 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 -0.67 0.31 -0.29
67 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein 0.67 0.32 -0.32
68 AT4G02500 UDP-xylosyltransferase 2 ARABIDOPSIS THALIANA
UDP-XYLOSYLTRANSFERASE 2,
UDP-xylosyltransferase 2, XYG
XYLOSYLTRANSFERASE 2		 -0.67 0.32 -0.31
69 AT3G53700 Pentatricopeptide repeat (PPR) superfamily protein maternal effect embryo arrest 40 -0.67 0.31 -0.3
70 AT1G77200 Integrase-type DNA-binding superfamily protein -0.67 0.3 -0.31
71 AT1G60660 cytochrome B5-like protein ARABIDOPSIS CYTOCHROME B5-LIKE
PROTEIN, B5 #5, cytochrome B5-like
protein		 -0.67 0.31 -0.33
72 AT5G10240 asparagine synthetase 3 asparagine synthetase 3 -0.66 0.33 -0.34
73 AT2G14890 arabinogalactan protein 9 arabinogalactan protein 9 -0.66 0.33 -0.33
74 AT2G41770 Protein of unknown function (DUF288) -0.66 0.3 -0.33
75 AT4G32915 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of translational fidelity; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glu-tRNAGln amidotransferase, C subunit
(InterPro:IPR003837); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.66 0.35 -0.32
76 AT3G07320 O-Glycosyl hydrolases family 17 protein -0.66 0.32 -0.31
77 AT3G24506 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G17240.1); Has 4864
Blast hits to 709 proteins in 125 species: Archae - 0;
Bacteria - 592; Metazoa - 786; Fungi - 33; Plants - 410;
Viruses - 61; Other Eukaryotes - 2982 (source: NCBI BLink).		 -0.66 0.3 -0.32
78 AT3G06035 Glycoprotein membrane precursor GPI-anchored -0.66 0.33 -0.31
79 AT4G01970 stachyose synthase stachyose synthase, raffinose
synthase 4, stachyose synthase		 -0.66 0.33 -0.28
80 AT1G75810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 13 Blast hits to 13
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.65 0.31 -0.31
81 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 0.64 0.3 -0.3
82 AT1G32700 PLATZ transcription factor family protein 0.64 0.33 -0.3
83 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 0.63 0.33 -0.3
84 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.63 0.32 -0.31
85 AT1G12200 Flavin-binding monooxygenase family protein flavin monooxygenase 0.63 0.32 -0.32
86 AT4G28040 nodulin MtN21 /EamA-like transporter family protein 0.63 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
87 C0125 isorhamnetin-3-O-glucoside - - - -0.8 0.43 -0.44
88 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine -0.79 0.42 -0.42 C0050
89 C0118 Hyperoside - Quercetin-3-glucoside quercetin glucoside biosynthesis (Arabidopsis),
rutin biosynthesis 		-0.74 0.45 -0.45 C0118
90 C0127 Isorhamnetin-hexosyl-rhamnoside - - - -0.67 0.46 -0.45