AT5G24930 : ATCOL4
Query Information
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AGICode AT5G24930
Description CONSTANS-like 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G24930 CONSTANS-like 4 ATCOL4, CONSTANS-like 4 1 0.32 -0.3
2 AT3G28760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate
synthase, prokaryotic-type (InterPro:IPR002812); Has 390
Blast hits to 390 proteins in 131 species: Archae - 144;
Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54;
Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).		 0.85 0.31 -0.31
3 AT4G28706 pfkB-like carbohydrate kinase family protein 0.82 0.3 -0.32
4 AT1G17140 interactor of constitutive active rops 1 interactor of constitutive active
rops 1, ROP INTERACTIVE PARTNER 1		 0.8 0.32 -0.32
5 AT4G21680 NITRATE TRANSPORTER 1.8 NITRATE TRANSPORTER 1.8 -0.78 0.31 -0.32
6 AT2G01400 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.32 -0.31
7 AT2G46380 Protein of unknown function (DUF3133) 0.77 0.31 -0.32
8 AT1G50240 Protein kinase family protein with ARM repeat domain FUSED 0.77 0.31 -0.31
9 AT4G18010 myo-inositol polyphosphate 5-phosphatase 2 myo-inositol polyphosphate
5-phosphatase 2, myo-inositol
polyphosphate 5-phosphatase 2,
INOSITOL(1,4,5)P3 5-PHOSPHATASE II		 -0.77 0.32 -0.32
10 AT2G43010 phytochrome interacting factor 4 AtPIF4, phytochrome interacting
factor 4, SRL2		 0.77 0.31 -0.31
11 ATMG00690 hypothetical protein ORF240A -0.77 0.3 -0.33
12 AT2G43780 unknown protein; Has 30 Blast hits to 30 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.34 -0.31
13 AT4G27800 thylakoid-associated phosphatase 38 PROTEIN PHOSPHATASE 1,
thylakoid-associated phosphatase
38		 0.76 0.3 -0.31
14 AT3G59110 Protein kinase superfamily protein 0.76 0.34 -0.32
15 AT4G34200 D-3-phosphoglycerate dehydrogenase embryo sac development arrest 9 -0.76 0.3 -0.31
16 AT1G70770 Protein of unknown function DUF2359, transmembrane -0.75 0.31 -0.34
17 AT5G44400 FAD-binding Berberine family protein 0.75 0.31 -0.31
18 AT4G31310 AIG2-like (avirulence induced gene) family protein 0.75 0.3 -0.31
19 AT5G04490 vitamin E pathway gene 5 vitamin E pathway gene 5 0.75 0.35 -0.3
20 AT3G26090 G-protein coupled receptors;GTPase activators REGULATOR OF G-PROTEIN SIGNALING
1, REGULATOR OF G-PROTEIN
SIGNALING 1		 -0.75 0.31 -0.32
21 AT1G24764 microtubule-associated proteins 70-2 microtubule-associated proteins
70-2, microtubule-associated
proteins 70-2		 0.75 0.3 -0.31
22 AT5G40760 glucose-6-phosphate dehydrogenase 6 glucose-6-phosphate dehydrogenase
6		 -0.75 0.3 -0.31
23 AT5G07800 Flavin-binding monooxygenase family protein 0.75 0.28 -0.32
24 AT5G50740 Heavy metal transport/detoxification superfamily protein 0.75 0.32 -0.32
25 AT1G75090 DNA glycosylase superfamily protein 0.74 0.33 -0.32
26 AT1G66130 NAD(P)-binding Rossmann-fold superfamily protein 0.74 0.32 -0.31
27 AT1G61900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
anchored to plasma membrane, plasma membrane, anchored to
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast
hits to 65 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.31 -0.33
28 AT1G73470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 72 Blast hits to 72 proteins
in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.74 0.31 -0.33
29 AT1G67040 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.32 -0.31
30 AT5G08590 SNF1-related protein kinase 2.1 ARABIDOPSIS SERINE/THREONINE
KINASE 2, ARABIDOPSIS SKP1-LIKE1,
SNRK2-1, SNF1-related protein
kinase 2.1, SRK2G		 0.73 0.32 -0.31
31 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.73 0.33 -0.33
32 AT5G20400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.73 0.31 -0.31
33 AT5G12900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G12330.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.3 -0.33
34 AT3G22425 imidazoleglycerol-phosphate dehydratase HISN5A,
imidazoleglycerol-phosphate
dehydratase		 0.73 0.32 -0.34
35 AT1G29160 Dof-type zinc finger DNA-binding family protein -0.73 0.31 -0.33
36 AT2G32020 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.72 0.34 -0.29
37 AT5G18420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2363
(InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.72 0.34 -0.33
38 AT1G65610 Six-hairpin glycosidases superfamily protein ARABIDOPSIS THALIANA GLYCOSYL
HYDROLASE 9A2, KORRIGAN 2		 -0.72 0.31 -0.3
39 AT2G04850 Auxin-responsive family protein 0.72 0.33 -0.32
40 AT4G35500 Protein kinase superfamily protein -0.72 0.33 -0.32
41 AT3G06720 importin alpha isoform 1 IMPORTIN ALPHA, AT-IMP, ATKAP
ALPHA, importin alpha isoform 1,
IMPORTIN ALPHA ISOFORM 1		 -0.72 0.3 -0.31
42 AT4G23010 UDP-galactose transporter 2 ATUTR2, UDP-galactose transporter
2		 -0.72 0.33 -0.32
43 AT5G23020 2-isopropylmalate synthase 2 2-isopropylmalate synthase 2,
METHYLTHIOALKYMALATE
SYNTHASE-LIKE, MAM3		 -0.71 0.3 -0.32
44 AT1G44170 aldehyde dehydrogenase 3H1 aldehyde dehydrogenase 3H1,
aldehyde dehydrogenase 4		 -0.71 0.31 -0.32
45 AT3G27190 uridine kinase-like 2 uridine kinase-like 2 -0.71 0.31 -0.33
46 AT2G39660 botrytis-induced kinase1 botrytis-induced kinase1 -0.7 0.34 -0.32
47 AT4G11080 HMG (high mobility group) box protein 3xHigh Mobility Group-box1 0.7 0.33 -0.33
48 AT2G37250 adenosine kinase adenosine kinase, ATPADK1 -0.7 0.32 -0.32
49 AT1G22160 Protein of unknown function (DUF581) 0.7 0.31 -0.31
50 AT5G43170 zinc-finger protein 3 zinc-finger protein 3, zinc-finger
protein 3		 -0.7 0.32 -0.32
51 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 -0.7 0.31 -0.33
52 AT3G20410 calmodulin-domain protein kinase 9 calmodulin-domain protein kinase 9 -0.7 0.31 -0.32
53 AT1G72250 Di-glucose binding protein with Kinesin motor domain 0.7 0.31 -0.31
54 AT1G05180 NAD(P)-binding Rossmann-fold superfamily protein AUXIN RESISTANT 1 -0.69 0.31 -0.32
55 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 0.69 0.32 -0.34
56 AT5G45950 GDSL-like Lipase/Acylhydrolase superfamily protein 0.69 0.3 -0.3
57 AT1G14300 ARM repeat superfamily protein -0.69 0.34 -0.27
58 AT3G13790 Glycosyl hydrolases family 32 protein ATBFRUCT1, ARABIDOPSIS THALIANA
CELL WALL INVERTASE 1		 -0.69 0.33 -0.32
59 AT3G01960 unknown protein; Has 13 Blast hits to 13 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.32 -0.31
60 AT4G35260 isocitrate dehydrogenase 1 isocitrate dehydrogenase I,
isocitrate dehydrogenase 1		 -0.69 0.3 -0.31
61 AT1G51500 ABC-2 type transporter family protein ATP-binding cassette G12,
AtABCG12, ARABIDOPSIS THALIANA
WHITE-BROWN COMPLEX 12, ECERIFERUM
5, D3, WHITE-BROWN COMPLEX 12		 0.69 0.31 -0.34
62 AT1G76740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G76840.1); Has 3683 Blast hits
to 2942 proteins in 407 species: Archae - 9; Bacteria -
440; Metazoa - 1472; Fungi - 269; Plants - 192; Viruses -
8; Other Eukaryotes - 1293 (source: NCBI BLink).		 0.69 0.32 -0.32
63 AT2G31440 INVOLVED IN: positive regulation of catalytic activity,
protein processing; LOCATED IN: integral to membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Aph-1
(InterPro:IPR009294); Has 268 Blast hits to 262 proteins in
79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22
(source: NCBI BLink).		 0.69 0.3 -0.31
64 AT5G26280 TRAF-like family protein -0.69 0.31 -0.33
65 AT5G03170 FASCICLIN-like arabinogalactan-protein 11 ARABIDOPSIS FASCICLIN-LIKE
ARABINOGALACTAN-PROTEIN 11,
FASCICLIN-like
arabinogalactan-protein 11		 0.69 0.33 -0.3
66 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family
protein		 -0.68 0.3 -0.32
67 AT3G52920 Family of unknown function (DUF662) 0.68 0.33 -0.29
68 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 -0.68 0.3 -0.32
69 AT3G10200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.32 -0.3
70 AT3G11340 UDP-Glycosyltransferase superfamily protein UDP-dependent glycosyltransferase
76B1		 -0.68 0.3 -0.31
71 AT4G39980 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 3-deoxy-D-arabino-heptulosonate
7-phosphate synthase 1		 -0.68 0.34 -0.3
72 AT1G53760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, plastid, membrane;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2343 (InterPro:IPR018786); Has 171
Blast hits to 171 proteins in 90 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 127; Plants - 41;
Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).		 -0.68 0.31 -0.32
73 AT1G19330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits
to 145 proteins in 43 species: Archae - 0; Bacteria - 0;
Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.68 0.31 -0.3
74 AT4G12240 zinc finger (C2H2 type) family protein -0.67 0.31 -0.32
75 AT5G42720 Glycosyl hydrolase family 17 protein 0.67 0.32 -0.33
76 AT3G01920 DHBP synthase RibB-like alpha/beta domain 0.67 0.33 -0.33
77 AT4G22470 protease inhibitor/seed storage/lipid transfer protein
(LTP) family protein		 -0.67 0.3 -0.32
78 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 0.67 0.31 -0.33
79 AT1G04945 HIT-type Zinc finger family protein -0.67 0.34 -0.31
80 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 0.67 0.3 -0.34
81 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.67 0.32 -0.32
82 AT4G25030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G45410.3); Has 125 Blast hits
to 125 proteins in 36 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 4; Plants - 88; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.33 -0.33
83 AT5G18210 NAD(P)-binding Rossmann-fold superfamily protein 0.67 0.3 -0.32
84 AT1G21060 Protein of unknown function, DUF547 0.67 0.32 -0.3
85 AT5G25280 serine-rich protein-related 0.67 0.31 -0.33
86 AT1G51380 DEA(D/H)-box RNA helicase family protein -0.66 0.33 -0.3
87 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain -0.66 0.3 -0.32
88 AT3G50780 BEST Arabidopsis thaliana protein match is: BTB/POZ
domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast
hits to 298 proteins in 22 species: Archae - 0; Bacteria -
0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink).		 0.66 0.31 -0.29
89 AT1G11660 heat shock protein 70 (Hsp 70) family protein -0.66 0.31 -0.33
90 AT2G01990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G14630.1); Has 118 Blast hits
to 118 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.32
91 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 0.66 0.32 -0.3
92 AT3G48570 secE/sec61-gamma protein transport protein -0.66 0.3 -0.32
93 AT2G40940 ethylene response sensor 1 ETHYLENE RESPONSE SENSOR, ethylene
response sensor 1		 -0.66 0.3 -0.31
94 AT1G77210 sugar transporter 14 sugar transport protein 14, sugar
transport protein 14		 0.66 0.32 -0.32
95 AT4G00090 Transducin/WD40 repeat-like superfamily protein -0.66 0.33 -0.33
96 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 0.66 0.31 -0.33
97 AT2G23620 methyl esterase 1 ARABIDOPSIS THALIANA METHYL
ESTERASE 1, methyl esterase 1		 -0.66 0.31 -0.32
98 AT4G29020 glycine-rich protein 0.66 0.3 -0.33
99 AT5G49480 Ca2+-binding protein 1 Ca2+-binding protein 1,
Ca2+-binding protein 1		 -0.66 0.3 -0.31
100 AT5G39580 Peroxidase superfamily protein -0.65 0.3 -0.32
101 AT1G61040 plus-3 domain-containing protein vernalization independence 5 -0.65 0.31 -0.32
102 AT3G11150 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.34 -0.32
103 AT4G08770 Peroxidase superfamily protein peroxidase 37 -0.65 0.3 -0.32
104 AT1G56080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 12 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G16520.1); Has 196 Blast
hits to 193 proteins in 50 species: Archae - 2; Bacteria -
0; Metazoa - 9; Fungi - 2; Plants - 132; Viruses - 0; Other
Eukaryotes - 51 (source: NCBI BLink).		 -0.65 0.31 -0.31
105 AT5G56360 calmodulin-binding protein PRIORITY IN SWEET LIFE 4 -0.65 0.35 -0.34
106 AT4G24040 trehalase 1 ATTRE1, trehalase 1 -0.65 0.3 -0.31
107 AT1G51590 alpha-mannosidase 1 ALPHA-MANNOSIDASE IB,
alpha-mannosidase 1		 -0.65 0.32 -0.31
108 AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.65 0.32 -0.32
109 AT1G61370 S-locus lectin protein kinase family protein -0.65 0.35 -0.33
110 AT1G68320 myb domain protein 62 myb domain protein 62, BW62B,
BW62C, myb domain protein 62		 -0.65 0.31 -0.32
111 AT5G08300 Succinyl-CoA ligase, alpha subunit -0.65 0.33 -0.32
112 AT3G20920 translocation protein-related -0.64 0.31 -0.32
113 AT5G36950 DegP protease 10 DegP protease 10 -0.64 0.32 -0.31
114 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.64 0.29 -0.31
115 AT4G30280 xyloglucan endotransglucosylase/hydrolase 18 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 18,
xyloglucan
endotransglucosylase/hydrolase 18		 -0.64 0.32 -0.29
116 AT1G16740 Ribosomal protein L20 -0.64 0.31 -0.32
117 AT3G54100 O-fucosyltransferase family protein -0.64 0.32 -0.32
118 AT4G15270 glucosyltransferase-related -0.64 0.3 -0.3
119 AT1G61640 Protein kinase superfamily protein -0.64 0.3 -0.32
120 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 -0.64 0.32 -0.32
121 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 -0.64 0.29 -0.35
122 AT4G22212 Arabidopsis defensin-like protein -0.64 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		0.81 0.44 -0.47 C0063
124 C0183 MST_3033.1 - - - 0.79 0.48 -0.47
125 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.77 0.47 -0.44 C0252