AT5G66750 : ATDDM1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G66750
Description chromatin remodeling 1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G66750 chromatin remodeling 1 ATDDM1, CHA1, CHROMATIN REMODELING
1, chromatin remodeling 1,
DECREASED DNA METHYLATION 1,
SOMNIFEROUS 1, SOM4		 1 0.31 -0.34
2 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 0.84 0.33 -0.31
3 AT1G72230 Cupredoxin superfamily protein 0.82 0.32 -0.33
4 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 -0.79 0.32 -0.33
5 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 -0.79 0.32 -0.32
6 AT3G55640 Mitochondrial substrate carrier family protein -0.79 0.31 -0.3
7 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 -0.79 0.32 -0.33
8 AT1G04680 Pectin lyase-like superfamily protein 0.78 0.32 -0.32
9 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 0.78 0.31 -0.32
10 AT1G68820 Transmembrane Fragile-X-F-associated protein -0.78 0.3 -0.33
11 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.78 0.31 -0.31
12 AT3G56620 nodulin MtN21 /EamA-like transporter family protein -0.78 0.32 -0.3
13 AT5G11840 Protein of unknown function (DUF1230) -0.77 0.31 -0.31
14 AT1G20950 Phosphofructokinase family protein 0.77 0.3 -0.3
15 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 0.77 0.31 -0.32
16 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein -0.77 0.31 -0.31
17 AT5G35560 DENN (AEX-3) domain-containing protein -0.77 0.32 -0.3
18 AT1G58200 MSCS-like 3 MSCS-like 3 -0.76 0.32 -0.32
19 AT5G57815 Cytochrome c oxidase, subunit Vib family protein -0.76 0.29 -0.31
20 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 0.76 0.31 -0.32
21 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ATBSMT1, BSMT1 -0.76 0.33 -0.3
22 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 -0.76 0.3 -0.33
23 AT2G14620 xyloglucan endotransglucosylase/hydrolase 10 xyloglucan
endotransglucosylase/hydrolase 10		 -0.76 0.32 -0.34
24 AT3G27610 Nucleotidylyl transferase superfamily protein -0.75 0.31 -0.3
25 AT5G43380 type one serine/threonine protein phosphatase 6 type one serine/threonine protein
phosphatase 6		 -0.75 0.31 -0.3
26 AT2G32590 LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits
to 447 proteins in 202 species: Archae - 0; Bacteria - 4;
Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other
Eukaryotes - 108 (source: NCBI BLink).		 EMBRYO DEFECTIVE 2795 0.75 0.3 -0.33
27 AT2G27820 prephenate dehydratase 1 arogenate dehydratase 3,
prephenate dehydratase 1		 -0.75 0.3 -0.31
28 AT2G29450 glutathione S-transferase tau 5 AT103-1A, ARABIDOPSIS THALIANA
GLUTATHIONE S-TRANSFERASE TAU 1,
glutathione S-transferase tau 5,
glutathione S-transferase tau 5		 -0.75 0.3 -0.32
29 AT4G20930 6-phosphogluconate dehydrogenase family protein -0.75 0.31 -0.31
30 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.74 0.34 -0.31
31 AT1G80950 Phospholipid/glycerol acyltransferase family protein -0.74 0.31 -0.31
32 AT3G51730 saposin B domain-containing protein -0.74 0.33 -0.3
33 AT5G40210 nodulin MtN21 /EamA-like transporter family protein -0.74 0.31 -0.29
34 AT2G39870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G55690.1); Has 73 Blast hits
to 71 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 2; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.33 -0.3
35 AT4G22260 Alternative oxidase family protein IMMUTANS, IM1 -0.73 0.3 -0.3
36 AT3G49750 receptor like protein 44 receptor like protein 44, receptor
like protein 44		 0.73 0.32 -0.31
37 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 -0.73 0.33 -0.3
38 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.73 0.31 -0.3
39 AT4G35070 SBP (S-ribonuclease binding protein) family protein -0.73 0.31 -0.32
40 AT3G22260 Cysteine proteinases superfamily protein -0.73 0.31 -0.29
41 AT1G04970 lipid-binding serum glycoprotein family protein -0.72 0.29 -0.32
42 AT5G14590 Isocitrate/isopropylmalate dehydrogenase family protein -0.72 0.31 -0.32
43 AT5G58670 phospholipase C1 ARABIDOPSIS THALIANA PHOSPHOLIPASE
C, phospholipase C1, phospholipase
C 1, phospholipase C1		 -0.72 0.32 -0.3
44 AT5G38530 tryptophan synthase beta type 2 tryptophan synthase beta type 2 -0.72 0.32 -0.31
45 AT2G38050 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATDET2, DE-ETIOLATED 2, DWARF 6 -0.72 0.33 -0.32
46 AT2G27970 CDK-subunit 2 CDK-subunit 2 0.72 0.31 -0.31
47 AT5G59890 actin depolymerizing factor 4 actin depolymerizing factor 4,
ATADF4		 -0.72 0.33 -0.33
48 AT4G30130 Protein of unknown function (DUF630 and DUF632) 0.71 0.31 -0.3
49 AT3G62300 DOMAIN OF UNKNOWN FUNCTION 724 7 DOMAIN OF UNKNOWN FUNCTION 724 7,
DOMAIN OF UNKNOWN FUNCTION 724 7		 0.71 0.31 -0.33
50 AT1G49670 ARP protein (REF) NQR -0.71 0.31 -0.33
51 AT1G18040 cyclin-dependent kinase D1;3 CYCLIN-DEPENDENT KINASE D1;3,
CAK2AT, cyclin-dependent kinase
D1;3		 0.71 0.31 -0.34
52 AT4G30390 unknown protein; Has 22 Blast hits to 22 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.33 -0.37
53 AT4G21470 riboflavin kinase/FMN hydrolase riboflavin kinase/FMN hydrolase,
riboflavin kinase/FMN hydrolase		 -0.71 0.31 -0.33
54 AT5G50100 Putative thiol-disulphide oxidoreductase DCC -0.71 0.32 -0.31
55 AT1G73620 Pathogenesis-related thaumatin superfamily protein 0.71 0.3 -0.31
56 AT3G60660 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1395 (InterPro:IPR009829); Has 131
Blast hits to 131 proteins in 44 species: Archae - 0;
Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 45; Viruses
- 0; Other Eukaryotes - 3 (source: NCBI BLink).		 0.7 0.32 -0.31
57 AT5G09760 Plant invertase/pectin methylesterase inhibitor superfamily 0.7 0.31 -0.3
58 AT5G23810 amino acid permease 7 amino acid permease 7 -0.7 0.31 -0.29
59 AT2G04620 Cation efflux family protein -0.7 0.32 -0.31
60 AT2G13820 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP2, xylogen protein 2 0.7 0.29 -0.32
61 AT5G02940 Protein of unknown function (DUF1012) -0.7 0.29 -0.32
62 AT5G03150 C2H2-like zinc finger protein JACKDAW 0.7 0.31 -0.33
63 AT3G16870 GATA transcription factor 17 GATA transcription factor 17 0.7 0.31 -0.3
64 AT5G52430 hydroxyproline-rich glycoprotein family protein -0.7 0.32 -0.34
65 AT3G54630 CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80
(InterPro:IPR005550); Has 24780 Blast hits to 15608
proteins in 1321 species: Archae - 545; Bacteria - 2969;
Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39;
Other Eukaryotes - 4868 (source: NCBI BLink).		 0.7 0.31 -0.3
66 AT1G32190 alpha/beta-Hydrolases superfamily protein 0.69 0.3 -0.31
67 AT2G27490 dephospho-CoA kinase family ATCOAE -0.69 0.33 -0.32
68 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 0.69 0.32 -0.31
69 AT4G36400 FAD-linked oxidases family protein D-2-hydroxyglutarate dehydrogenase -0.69 0.31 -0.32
70 AT4G17370 Oxidoreductase family protein -0.69 0.3 -0.31
71 AT1G03420 transposable element gene sadhu non-coding retrotransposon
4-2		 0.69 0.32 -0.33
72 AT2G41790 Insulinase (Peptidase family M16) family protein -0.69 0.33 -0.3
73 AT3G55110 ABC-2 type transporter family protein ATP-binding cassette G18 -0.68 0.31 -0.29
74 AT1G60940 SNF1-related protein kinase 2.10 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-10, SNF1-related
protein kinase 2.10, SNF1-RELATED
KINASE 2B		 -0.68 0.31 -0.31
75 AT1G49320 unknown seed protein like 1 unknown seed protein like 1,
unknown seed protein like 1		 0.68 0.31 -0.31
76 AT2G32080 purin-rich alpha 1 purin-rich alpha 1 -0.68 0.35 -0.3
77 AT2G42160 zinc finger (ubiquitin-hydrolase) domain-containing protein BRAP2 RING ZnF UBP
domain-containing protein 1		 -0.68 0.32 -0.31
78 AT1G77260 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.3 -0.3
79 AT4G37210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.32 -0.33
80 AT5G18290 Aquaporin-like superfamily protein SIP1;2, SMALL AND BASIC INTRINSIC
PROTEIN 1B		 -0.68 0.3 -0.32
81 AT2G31350 glyoxalase 2-5 glyoxalase 2-5 -0.68 0.31 -0.32
82 AT5G06670 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.31 -0.33
83 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 0.67 0.32 -0.35
84 AT4G28440 Nucleic acid-binding, OB-fold-like protein 0.67 0.3 -0.32
85 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.67 0.3 -0.33
86 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 -0.67 0.33 -0.32
87 AT3G25180 cytochrome P450, family 82, subfamily G, polypeptide 1 cytochrome P450, family 82,
subfamily G, polypeptide 1		 -0.67 0.32 -0.33
88 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 -0.67 0.31 -0.32
89 AT5G49570 peptide-N-glycanase 1 peptide-N-glycanase 1,
peptide-N-glycanase 1		 -0.67 0.31 -0.3
90 AT1G02170 metacaspase 1 ARABIDOPSIS THALIANA METACASPASE
1, metacaspase 1b, ARABIDOPSIS
THALIANA METACASPASE 1B, LSD ONE
LIKE 3, metacaspase 1, metacaspase
1b		 -0.67 0.33 -0.3
91 AT3G29170 Eukaryotic protein of unknown function (DUF872) -0.67 0.32 -0.31
92 AT2G36970 UDP-Glycosyltransferase superfamily protein -0.67 0.31 -0.33
93 AT3G63150 MIRO-related GTP-ase 2 CALCIUM BINDING GTP-ASE,
MIRO-related GTP-ase 2		 -0.67 0.29 -0.3
94 AT1G12070 Immunoglobulin E-set superfamily protein 0.67 0.32 -0.29
95 AT2G20300 Protein kinase superfamily protein Abnormal Leaf Shape 2 0.66 0.31 -0.28
96 AT2G16440 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 4 0.66 0.33 -0.31
97 AT5G13960 SU(VAR)3-9 homolog 4 KRYPTONITE, SET DOMAIN PROTEIN 33,
SU(VAR)3-9 homolog 4		 0.65 0.29 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0165 MST_1688.6 - - - -0.77 0.46 -0.42
99 C0164 MST_1596.8 - - - -0.77 0.44 -0.44
100 C0014 O-Acetylserine O-Acetyl-L-serine O-Acetyl-L-serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		-0.7 0.29 -0.3 C0014