AGICode | AT5G64530 |
Description | xylem NAC domain 1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G64530 | xylem NAC domain 1 | Arabidopsis NAC domain containing protein 104, xylem NAC domain 1 |
1 | 0.33 | -0.32 | ||
2 | AT1G60770 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.66 | 0.3 | -0.32 | |||
3 | AT4G38980 | unknown protein; Has 44 Blast hits to 44 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 8; Plants - 24; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
-0.66 | 0.3 | -0.28 | |||
4 | AT5G64650 | Ribosomal protein L17 family protein | -0.65 | 0.3 | -0.31 | |||
5 | AT3G57920 | squamosa promoter binding protein-like 15 | squamosa promoter binding protein-like 15 |
0.65 | 0.31 | -0.34 | ||
6 | AT4G11830 | phospholipase D gamma 2 | phospholipase D gamma 2 | 0.65 | 0.31 | -0.31 | ||
7 | AT1G53530 | Peptidase S24/S26A/S26B/S26C family protein | -0.64 | 0.33 | -0.33 | |||
8 | AT2G35910 | RING/U-box superfamily protein | -0.64 | 0.34 | -0.33 | |||
9 | AT2G24765 | ADP-ribosylation factor 3 | ADP-ribosylation factor 3, ARF-LIKE 1, ARF-LIKE 1 |
-0.64 | 0.29 | -0.3 | ||
10 | AT1G19240 | unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.32 | -0.3 | |||
11 | AT1G71840 | transducin family protein / WD-40 repeat family protein | -0.62 | 0.34 | -0.33 | |||
12 | AT1G67620 | Lojap-related protein | -0.62 | 0.31 | -0.32 | |||
13 | AT2G17390 | ankyrin repeat-containing 2B | ankyrin repeat-containing 2B | -0.62 | 0.32 | -0.31 | ||
14 | AT4G04500 | cysteine-rich RLK (RECEPTOR-like protein kinase) 37 | cysteine-rich RLK (RECEPTOR-like protein kinase) 37 |
0.62 | 0.32 | -0.31 | ||
15 | AT4G01990 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.31 | -0.31 | |||
16 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
0.61 | 0.3 | -0.31 | |||
17 | AT3G28200 | Peroxidase superfamily protein | -0.61 | 0.32 | -0.33 | |||
18 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | -0.61 | 0.31 | -0.31 | |||
19 | AT4G21326 | subtilase 3.12 | subtilase 3.12, subtilase 3.12 | 0.6 | 0.3 | -0.31 | ||
20 | AT1G06490 | glucan synthase-like 7 | Arabidopsis thaliana glucan synthase-like 7, atgsl7, callose synthase 7, gsl07, glucan synthase-like 7, glucan synthase-like 7 |
0.6 | 0.34 | -0.3 | ||
21 | AT4G31080 | Protein of unknown function (DUF2296) | -0.6 | 0.32 | -0.32 | |||
22 | AT1G03350 | BSD domain-containing protein | -0.6 | 0.33 | -0.34 | |||
23 | AT1G60620 | RNA polymerase I subunit 43 | RNA polymerase I subunit 43, RNA polymerase I subunit 43 |
-0.6 | 0.28 | -0.29 | ||
24 | AT5G51340 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.6 | 0.34 | -0.31 | |||
25 | AT5G19680 | Leucine-rich repeat (LRR) family protein | -0.6 | 0.34 | -0.3 | |||
26 | AT1G13870 | calmodulin binding;purine nucleotide binding | AtKTI12, DEFORMED ROOTS AND LEAVES 1 |
-0.6 | 0.3 | -0.33 | ||
27 | AT1G27650 | U2 snRNP auxiliary factor small subunit, putative | ATU2AF35A | -0.6 | 0.31 | -0.32 | ||
28 | AT3G04020 | unknown protein; Has 26 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.6 | 0.29 | -0.3 | |||
29 | AT5G37140 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.6 | 0.29 | -0.3 | |||
30 | AT4G12470 | azelaic acid induced 1 | azelaic acid induced 1 | -0.59 | 0.3 | -0.32 | ||
31 | AT5G40640 | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.58 | 0.29 | -0.3 | |||
32 | AT4G37020 | BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.58 | 0.32 | -0.33 | |||
33 | AT2G45780 | other RNA | 0.58 | 0.31 | -0.31 | |||
34 | AT3G59900 | auxin-regulated gene involved in organ size | AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE |
-0.58 | 0.29 | -0.33 | ||
35 | AT1G53340 | Cysteine/Histidine-rich C1 domain family protein | -0.58 | 0.31 | -0.3 | |||
36 | AT5G12120 | Ubiquitin-associated/translation elongation factor EF1B protein |
-0.58 | 0.31 | -0.33 | |||
37 | AT1G24390 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.34 | |||
38 | AT1G18290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.29 | -0.31 | |||
39 | AT5G02670 | BEST Arabidopsis thaliana protein match is: poly(A) polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.29 | -0.31 | |||
40 | AT4G22950 | AGAMOUS-like 19 | AGAMOUS-like 19, GL19 | 0.57 | 0.31 | -0.31 | ||
41 | AT5G40200 | DegP protease 9 | DegP protease 9 | -0.57 | 0.31 | -0.3 | ||
42 | AT5G51850 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62170.1); Has 384 Blast hits to 375 proteins in 79 species: Archae - 0; Bacteria - 14; Metazoa - 135; Fungi - 31; Plants - 92; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). |
0.57 | 0.33 | -0.3 | |||
43 | AT4G26430 | COP9 signalosome subunit 6B | COP9 signalosome subunit 6B | -0.57 | 0.34 | -0.33 | ||
44 | AT2G13335 | transposable element gene | -0.57 | 0.32 | -0.29 | |||
45 | AT1G10200 | GATA type zinc finger transcription factor family protein | WLIM1 | -0.57 | 0.32 | -0.33 | ||
46 | AT3G06790 | plastid developmental protein DAG, putative | -0.56 | 0.32 | -0.31 | |||
47 | AT5G59260 | Concanavalin A-like lectin protein kinase family protein | -0.56 | 0.3 | -0.32 | |||
48 | AT2G15790 | peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase |
CYCLOPHILIN 40, SQUINT | -0.56 | 0.32 | -0.31 | ||
49 | AT1G75160 | Protein of unknown function (DUF620) | -0.56 | 0.31 | -0.33 | |||
50 | AT2G41810 | Protein of unknown function, DUF642 | -0.56 | 0.34 | -0.3 | |||
51 | AT5G49410 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.56 | 0.32 | -0.3 | |||
52 | AT4G37830 | cytochrome c oxidase-related | -0.56 | 0.34 | -0.33 | |||
53 | AT1G36060 | Integrase-type DNA-binding superfamily protein | -0.56 | 0.31 | -0.31 | |||
54 | AT5G54760 | Translation initiation factor SUI1 family protein | -0.56 | 0.31 | -0.31 | |||
55 | AT1G60270 | beta glucosidase 6 | beta glucosidase 6 | 0.56 | 0.34 | -0.3 | ||
56 | AT5G44030 | cellulose synthase A4 | cellulose synthase A4, IRREGULAR XYLEM 5, NWS2 |
0.56 | 0.32 | -0.33 | ||
57 | AT5G51130 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.56 | 0.3 | -0.32 | |||
58 | AT4G02380 | senescence-associated gene 21 | Arabidopsis thaliana late embryogenensis abundant like 5, senescence-associated gene 21 |
-0.55 | 0.33 | -0.3 | ||
59 | AT1G55550 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.55 | 0.31 | -0.33 | |||
60 | AT3G29300 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to 349 proteins in 91 species: Archae - 0; Bacteria - 85; Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other Eukaryotes - 178 (source: NCBI BLink). |
-0.55 | 0.32 | -0.31 | |||
61 | AT3G22680 | RNA-DIRECTED DNA METHYLATION 1 | RNA-DIRECTED DNA METHYLATION 1 | -0.55 | 0.3 | -0.31 | ||
62 | AT1G69810 | WRKY DNA-binding protein 36 | ATWRKY36, WRKY DNA-binding protein 36 |
-0.55 | 0.35 | -0.32 | ||
63 | AT5G13450 | delta subunit of Mt ATP synthase | delta subunit of Mt ATP synthase | -0.55 | 0.31 | -0.31 | ||
64 | AT5G44910 | Toll-Interleukin-Resistance (TIR) domain family protein | -0.55 | 0.32 | -0.33 | |||
65 | AT4G38410 | Dehydrin family protein | -0.55 | 0.32 | -0.33 | |||
66 | AT5G46910 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
0.55 | 0.32 | -0.29 | |||
67 | AT5G51290 | Diacylglycerol kinase family protein | 0.54 | 0.32 | -0.33 | |||
68 | AT1G30560 | Major facilitator superfamily protein | glycerol-3-phosphate permease 3, glycerol-3-phosphate permease 3 |
0.54 | 0.31 | -0.31 | ||
69 | AT1G03550 | Secretory carrier membrane protein (SCAMP) family protein | 0.54 | 0.32 | -0.31 | |||
70 | AT3G51910 | heat shock transcription factor A7A | ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, heat shock transcription factor A7A |
-0.54 | 0.31 | -0.32 | ||
71 | AT5G15725 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.54 | 0.33 | -0.32 | |||
72 | AT5G52840 | NADH-ubiquinone oxidoreductase-related | -0.54 | 0.33 | -0.33 | |||
73 | AT1G30000 | alpha-mannosidase 3 | alpha-mannosidase 3 | -0.54 | 0.32 | -0.31 | ||
74 | AT3G54130 | Josephin family protein | -0.54 | 0.29 | -0.32 | |||
75 | AT5G37030 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.54 | 0.31 | -0.34 | |||
76 | AT5G16270 | sister chromatid cohesion 1 protein 4 | ARABIDOPSIS HOMOLOG OF RAD21 3, sister chromatid cohesion 1 protein 4 |
0.54 | 0.33 | -0.32 | ||
77 | AT5G15230 | GAST1 protein homolog 4 | GAST1 protein homolog 4 | -0.54 | 0.31 | -0.36 | ||
78 | AT5G37230 | RING/U-box superfamily protein | -0.54 | 0.31 | -0.29 | |||
79 | AT2G41230 | unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
ORGAN SIZE RELATED 1 | -0.53 | 0.3 | -0.32 | ||
80 | AT3G05760 | C2H2 and C2HC zinc fingers superfamily protein | -0.53 | 0.31 | -0.31 | |||
81 | AT3G16760 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.53 | 0.3 | -0.31 | |||
82 | AT2G06090 | Plant self-incompatibility protein S1 family | -0.53 | 0.32 | -0.35 | |||
83 | AT5G66420 | CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.53 | 0.31 | -0.29 | |||
84 | AT5G47250 | LRR and NB-ARC domains-containing disease resistance protein |
0.53 | 0.31 | -0.29 | |||
85 | AT2G15440 | Protein of unknown function (DUF579) | 0.53 | 0.33 | -0.3 | |||
86 | AT5G57670 | Protein kinase superfamily protein | 0.52 | 0.31 | -0.31 | |||
87 | AT5G35670 | IQ-domain 33 | IQ-domain 33 | 0.52 | 0.34 | -0.33 | ||
88 | AT2G06190 | transposable element gene | 0.51 | 0.32 | -0.31 | |||
89 | AT4G28430 | Reticulon family protein | 0.51 | 0.33 | -0.34 | |||
90 | AT3G57440 | unknown protein; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.3 | -0.29 | |||
91 | AT3G22650 | F-box and associated interaction domains-containing protein | S-LOCUS F-BOX 61, CEGENDUO, S-LOCUS F-BOX 61 |
0.49 | 0.3 | -0.3 | ||
92 | AT2G22390 | pseudogene, putative GTP-binding protein, similar to GTP-binding protein GI:303738 from (Pisum sativum); blastp match of 75% identity and 3.6e-56 P-value to GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum sativum} |
ATRABA4E, RAB GTPase homolog A4E | 0.49 | 0.32 | -0.32 | ||
93 | AT5G38760 | Late embryogenesis abundant protein (LEA) family protein | 0.48 | 0.32 | -0.31 |